BAC Information

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BAC

Clone NameB6Ng01-266D15
Chromosome2 (Build37)
Map Location 3,605,451 - 3,606,091
singlet/doubletsinglet
Overlap genenone
Upstream gene9630050M13Rik, Nmt2, Rpp38, Acbd7, Olah, Meig1, Dclre1c, Suv39h2, Hspa14, Armetl1, LOC100040219, LOC666495
Downstream gene3110001A13Rik, LOC100040257, LOC100040163, LOC666944, 1700080N15Rik, Frmd4a, EG634452, Prpf18
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266D15.bB6Ng01-266D15.g
ACCGA069674GA069675
length1,209918
definitionB6Ng01-266D15.b B6Ng01-266D15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggtgagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctacctattcaacattg
tacttgaagtcctagccagagcaattaggcaacacaaggagatagatcaa
ggggatacaaattggaaaggaagaagtcaaaatatcacttttttcagatg
atatgatagtatatataagtgaccttaaaaattccaccagagaactccta
aacctgttaaacagcttcaatgaagtagctggatataaaattaactcaaa
caagtcaatggccttcctgtacacaaaggataaacaggctgaggaagaaa
ttagggaaacaacacccttctcaatagtcacaaacaatataaaatacctt
ggtgttactctaactaatgaagtgaaagatctgtatgataagaacttcaa
gtctctgaagaaagaaattaaagaagatctcagaagatggaaagatctcc
cattctcatggattggcaggatcaacattgtaaaaatggctatcttgcca
aaaccattctacagattcaatgcaatccccatcaaaatcccaactcaatt
cttcaacgaattagaaagggcaatgtgcaaattcatctggaataacaaaa
acctaggatagcaaaaactctactcaaggataaaagaacctctggtggaa
tcaccatgcctgacctaaaactgtactacagagcaatgtgataaaaactg
catggtactggtatagcgacagacaagtagaccaatggaatagaattgaa
gacccagaaatgaacccacacacttatggtcacttgatctttgacaaggg
agcaaaaaccatctagtggaaaaaagacagcattttcaacaaatggtgct
ggcacaactggcggttatcacgtagaagtatgagaattgatccattccta
tctccttgtactaaggtcaaatctaaatggattaggaactccacataaaa
ccagagacactgaaacttaatagagagaaagtaggcaaagcctcgagatt
tgagacagggaaagttcctgaatagaacagccatgcttgtgatgtagatg
agatcgacaatggaacctcaataaattgcaagccttcttcaggcaaaaga
aacacgcgt
gaattctctctagagaaccagctgactttgcatacagagactctgtgtca
aataggaacaaggtagatgactgaggactatcaccaaagattgctccctg
ctaactgtatgcattccttggtatgaacaagctctcctccccacaccccc
acatacaaacatacaaacacacacacagacaaacacagagagacagagac
agagagacacacagcgagagacaatggggagaaaatggaagagccattga
aatctttttgaatctcacttttttatcatctgacccgatttctcttgccc
acacctaatttggcagtaacctgtcttaagcaactctttttttttttttt
ttttttttttttggtcagacatctcacaaatgcttgtaattccaatgcct
ggggctctgatactcttctggactaccatatacacataatttaaaaaatt
aaaaaacaataattgtgcaaatacagagaccacaaccagacaatatgcag
ggaatgaaagacctcagaatcttcagccctaaatgtgatgtctccatgaa
atccctcccctcagggctcaaaaaaccctgcagaaaaggaggcagaaaga
atgtgaaagccagaggggatggaggacagctaggaaaccaggccctctaa
atcaacaagatctacacacgtatgaattcacagacactgaggcaacatgc
acagagcctacatgggtctgcacaagatggggtcctagagcagaaagaga
agtagatatatgcccctataattaacccagaagctatctctaggataacc
aattgcaaatggaaaattagttttctctaagggactctcatgggaagcaa
actaccaagtctaggctatgtgcccaggagtagatgcccaactgaaaatg
aactcagcgccatcttag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_3605451_3606091
seq2: B6Ng01-266D15.g_71_711 (reverse)

seq1  CTGGTTTCCTAGCTGTCCTCCATCCCCTCTGGCTTTCACATTCTTTCTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTTCCTAGCTGTCCTCCATCCCCTCTGGCTTTCACATTCTTTCTGC  50

seq1  CTCCTTTTCTGCAGGGTTCTCTGAGCCCTGAGGGGAGGGATTTCATGGAG  100
      |||||||||||||||||| | |||||||||||||||||||||||||||||
seq2  CTCCTTTTCTGCAGGGTTTTTTGAGCCCTGAGGGGAGGGATTTCATGGAG  100

seq1  ACATCACATTTAGGGCTGAAGATTCTGAGGTCTTTCATTCCCTGCATATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCACATTTAGGGCTGAAGATTCTGAGGTCTTTCATTCCCTGCATATT  150

seq1  GTCTGGTTGTGGTCTCTGTATTTGCACAATTATTGTTTTTTAATTTTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGTTGTGGTCTCTGTATTTGCACAATTATTGTTTTTTAATTTTTTA  200

seq1  AATTATGTGTATATGGTAGTCCAGAAGAGTATCAGAGCCCCAGGCATTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATGTGTATATGGTAGTCCAGAAGAGTATCAGAGCCCCAGGCATTGG  250

seq1  AATTACAAGCATTTGTGAGATGTCTGACCAAAAAAAAAAAAAAAAAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACAAGCATTTGTGAGATGTCTGACCAAAAAAAAAAAAAAAAAAAAA  300

seq1  AAAAAGAGTTGCTTAAGACAGGTTACTGCCAAATTAGGTGTGGGCAAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAGTTGCTTAAGACAGGTTACTGCCAAATTAGGTGTGGGCAAGAG  350

seq1  AAATCGGGTCAGATGATAAAAAAGTGAGATTCAAAAAGATTTCAATGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCGGGTCAGATGATAAAAAAGTGAGATTCAAAAAGATTTCAATGGCT  400

seq1  CTTCCATTTTCTCCCCATTGTCTCTCGCTGTGTGTCTCTCTGTCTCTGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCATTTTCTCCCCATTGTCTCTCGCTGTGTGTCTCTCTGTCTCTGTC  450

seq1  TCTCTGTGTTTGTCTGTGTGTGTGTTTGTATGTTTGTATGTGGGGGTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTGTTTGTCTGTGTGTGTGTTTGTATGTTTGTATGTGGGGGTGTG  500

seq1  GGGAGGAGAGCTTGTTCATACCAAGGAATGCATACAGTTAGCAGGGAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGAGAGCTTGTTCATACCAAGGAATGCATACAGTTAGCAGGGAGCA  550

seq1  ATCTTTGGTGATAGTCCTCAGTCATCTACCTTGTTCCTATTTGACACAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTGGTGATAGTCCTCAGTCATCTACCTTGTTCCTATTTGACACAGA  600

seq1  GTCTCTGTATGCAAAGTCAGCTGGTTCTCTAGAGAGAATTC  641
      |||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTGTATGCAAAGTCAGCTGGTTCTCTAGAGAGAATTC  641