BAC Information

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BAC

Clone NameB6Ng01-266I24
Chromosome2 (Build37)
Map Location 83,532,803 - 83,646,227
singlet/doubletdoublet
Overlap geneItgav, Dnmt3l-ps1
Upstream geneLOC433440, Fsip2, LOC545429, Ppia-ps2_981.1, LOC100040818, LOC668077, Zc3h15
Downstream geneD430039N05Rik, Zswim2, LOC668096, LOC668100, LOC545432, LOC668107, LOC668113, LOC668115, LOC668119, LOC383725, Calcrl, Tfpi, LOC672763, Ctnnd1, 2700094K13Rik, Txndc14, Med19, Zdhhc5, Clp1, Ypel4, Serping1, Ube2l6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266I24.bB6Ng01-266I24.g
ACCGA069929GA069930
length9941,118
definitionB6Ng01-266I24.b B6Ng01-266I24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(83,532,803 - 83,533,646)(83,645,101 - 83,646,227)
sequence
gaattcctaaattattaacaaggaggatgccctcatggcttccattttct
taccactcactcatttccttggtttcttgaaatttggattccatccttgg
tttgctttctgaacataattccttcaaagagttaccaattaccctacgtt
tggcaacacgttcagttttttttccttggcctttatgcaccgttgagcac
aggagggcatcccgttctcctgagcctttcttcctcctccgtgccacttg
taggctcagctagacctctatagcactgttctgtccagaggtgtcctttc
tggcttctcttcttcctttcacaagctctgagtaaataacctactgttag
ctttcaatccgagacaaatggctgagctgcctacttaacatatcaaagcc
gacctggctaccaggttctcccagcattcctcagtccctggctggcatac
tccacccccaccctaaacgctccagcagagctggactgatcttccctata
tgatccaaccatctccatctccataataacacagagactcatatttattt
atgaaagctgagaccttactttgctatctctcagctggctcatataactt
aacctatttattctaatctgagtttgccacaaggcctgttacttctcatt
cagtccccatgtgtctgacttcctctgtgtctgcctggcaaatacttgtc
ccttaattattccccagagttcctatctctgcccataagtcccgcctttc
ccctcctgcctcagttattggctgtcagctctttattaaaccaattggaa
ggtgatggagaggagtgtttacaaaatactgatccataaaaagtaacaat
accaagtctggacgttactcagctctcctccagtgcagaagccaacattt
gaataatgcaaagacaacctttacactgtggacaaaaagattaccccaac
atccaaccatcttgctccttctgtacctttgggctcctgactgc
gaattctctcaaatggggatggatgccaccttggccttctgttgccctac
aagaaccagttgctctaccaatatatactttgccactaaattccctcctc
ggggttagactcactacagaaactcacactgttctcgtaaggcggcaaca
aactcttgtctgctcttagtgattttcctcattatataaataatgtattc
atgaggatttactattaataagtaatattgtaatacaggtagatttaaga
caatattttgactgtttcaccttccgtagtcattcagaacacaatcagaa
ttatgatgataattaaacataagggaggaaagtaaccctcacacagatgt
tttaaagtaccaactctaaaataaatatctctataagaaatcagtatcca
cgttaatattcctcacatgtgtcaaatgtcctctggatcaatcaatttct
ttaattaacctatattatgaaaattttatgcttagaaataaatgttaatt
attggtaaattacaaatatgaatctaaaataatctcttgctattttgttg
actacatgcctatgctgttatgggataaagagtatctcaacatttttttc
agagtgttaactctcaaattacagttcctaagtttacagagatacaaatt
tatattttttaaaagaaaatccatgctattgttgaaaactacatcatgtt
aatttccaattacaaatatctttcaatctctaacagaaagttattccttg
gcatagaagccataataggaataactgtaaaaatcaatattgatttttac
aaagaatgaatttcattgattttcaggaatgacaactattatgttgacag
acaaagaaaggtaaaagtttgtataggccaacttagtgacctgtgtggta
gtcctaagtagcttagagacacttgtcctaagaccaaaatgtttcttaaa
gatttaatgtattggtttaaaaaaatattattgcatatatgattatgatc
tttcaagcagactcattaatttaaattttattaaagctaatatagggtct
gtctatatttctatcgtacactcacaataaatgtgcttcatgtttatgaa
atatatttcttcaaatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_83532803_83533646
seq2: B6Ng01-266I24.b_48_891

seq1  GAATTCCTAAATTATTAACAAGGAGGATGCCCTCATGGCTTCCATTTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAAATTATTAACAAGGAGGATGCCCTCATGGCTTCCATTTTCT  50

seq1  TACCACTCACTCATTTCCTTGGTTTCTTGAAATTTGGATTCCATCCTTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCACTCACTCATTTCCTTGGTTTCTTGAAATTTGGATTCCATCCTTGG  100

seq1  TTTGCTTTCTGAACATAATTCCTTCAAAGAGTTACCAATTACCCTACGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTTCTGAACATAATTCCTTCAAAGAGTTACCAATTACCCTACGTT  150

seq1  TGGCAACACGTTCAGTTTTTTTTCCTTGGCCTTTATGCACCGTTGAGCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAACACGTTCAGTTTTTTTTCCTTGGCCTTTATGCACCGTTGAGCAC  200

seq1  AGGAGGGCATCCCGTTCTCCTGAGCCTTTCTTCCTCCTCCGTGCCACTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGGCATCCCGTTCTCCTGAGCCTTTCTTCCTCCTCCGTGCCACTTG  250

seq1  TAGGCTCAGCTAGACCTCTATAGCACTGTTCTGTCCAGAGGTGTCCTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTCAGCTAGACCTCTATAGCACTGTTCTGTCCAGAGGTGTCCTTTC  300

seq1  TGGCTTCTCTTCTTCCTTTCACAAGCTCTGAGTAAATAACCTACTGTTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTCTCTTCTTCCTTTCACAAGCTCTGAGTAAATAACCTACTGTTAG  350

seq1  CTTTCAATCCGAGACAAATGGCTGAGCTGCCTACTTAACATATCAAAGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAATCCGAGACAAATGGCTGAGCTGCCTACTTAACATATCAAAGCC  400

seq1  GACCTGGCTACCAGGTTCTCCCAGCATTCCTCAGTCCCTGGCTGGCATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGGCTACCAGGTTCTCCCAGCATTCCTCAGTCCCTGGCTGGCATAC  450

seq1  TCCACCCCCACCCTAAACGCTCCAGCAGAGCTGGACTGATCTTCCCTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCCCCACCCTAAACGCTCCAGCAGAGCTGGACTGATCTTCCCTATA  500

seq1  TGATCCAACCATCTCCATCTCCATAATAACACAGAGACTCATATTTATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCAACCATCTCCATCTCCATAATAACACAGAGACTCATATTTATTT  550

seq1  ATGAAAGCTGAGACCTTACTTTGCTATCTCTCAGCTGGCTCATATAACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAGCTGAGACCTTACTTTGCTATCTCTCAGCTGGCTCATATAACTT  600

seq1  AACCTATTTATTCTAATCTGAGTTTGCCACAAGGCCTGTTACTTCTCATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTATTTATTCTAATCTGAGTTTGCCACAAGGCCTGTTACTTCTCATT  650

seq1  CAGTCCCCATGTGTCTGACTTCCTCTGTGTCTGCCTGGCAAATACTTGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCCCATGTGTCTGACTTCCTCTGTGTCTGCCTGGCAAATACTTGTC  700

seq1  CCTTAATTATTCCCCAGAGTTCCTATCTCTGCCCATAAGTCCCGCCTTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAATTATTCCCCAGAGTTCCTATCTCTGCCCATAAGTCCCGCCTTTC  750

seq1  CCCTCCTGCCTCAGTTATTGGCTGTCAGCTCTTTATTAAACCAATTGGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCTGCCTCAGTTATTGGCTGTCAGCTCTTTATTAAACCAATTGGAA  800

seq1  GGTGATGGAGAGGAGTGTTTACAAAATACTGATCCATAAAAAGT  844
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATGGAGAGGAGTGTTTACAAAATACTGATCCATAAAAAGT  844

seq1: chr2_83645101_83646227
seq2: B6Ng01-266I24.g_69_1186 (reverse)

seq1  TAATTTGGAGAATATAT-TTTCAT-AACATGAAGCACATTTA-TGTGAGT  47
      ||||||| |||| |||| |||||| ||||||||||||||||| |||||| 
seq2  TAATTTGAAGAA-ATATATTTCATAAACATGAAGCACATTTATTGTGAG-  48

seq1  TGTACGAATTAG-AATATAGACAGGACCCTATATTTAGCTTTAATAAAAT  96
      |||||||  ||| |||||||||| ||||||||| ||||||||||||||| 
seq2  TGTACGA--TAGAAATATAGACA-GACCCTATA-TTAGCTTTAATAAAA-  93

seq1  TTTAAATTAATGAGTTCTGGCTTGAAAGATCATAATCATATATGCAATAA  146
      |||||||||||||| ||| |||||||||||||||||||||||||||||||
seq2  TTTAAATTAATGAG-TCT-GCTTGAAAGATCATAATCATATATGCAATAA  141

seq1  TTATTTTTTTAAACCAATACATTTAAATTCTTTTAAGAAACATTTTGGTC  196
       |||||||||||||||||||| ||||||   |||||||||||||||||||
seq2  -TATTTTTTTAAACCAATACA-TTAAAT--CTTTAAGAAACATTTTGGTC  187

seq1  TTAGGGACAAGTGTCTCTAAGCTACTTAGGACTACCACACAGGTCACTAA  246
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTA-GGACAAGTGTCTCTAAGCTACTTAGGACTACCACACAGGTCACTAA  236

seq1  GTTGGCCTATACAAACTTTTACC-TTCTTTGTCTGTCAACATAATAGTTG  295
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GTTGGCCTATACAAACTTTTACCTTTCTTTGTCTGTCAACATAATAGTTG  286

seq1  TCATTCCTGAAAATCAATGAAATTCATTCTTTGTAAAAATCAATATTGAT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCCTGAAAATCAATGAAATTCATTCTTTGTAAAAATCAATATTGAT  336

seq1  TTTTACAGTTATTCCTATTATGGCTTCTATGCCAAGGAATAACTTTCTGT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACAGTTATTCCTATTATGGCTTCTATGCCAAGGAATAACTTTCTGT  386

seq1  TAGAGATTGAAAGATATTTGTAATTGGAAATTAACATGATGTAGTTTTCA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGATTGAAAGATATTTGTAATTGGAAATTAACATGATGTAGTTTTCA  436

seq1  ACAATAGCATGGATTTTCTTTTAAAAAATATAAATTTGTATCTCTGTAAA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATAGCATGGATTTTCTTTTAAAAAATATAAATTTGTATCTCTGTAAA  486

seq1  CTTAGGAACTGTAATTTGAGAGTTAACACTCTGAAAAAAATGTTGAGATA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGAACTGTAATTTGAGAGTTAACACTCTGAAAAAAATGTTGAGATA  536

seq1  CTCTTTATCCCATAACAGCATAGGCATGTAGTCAACAAAATAGCAAGAGA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTATCCCATAACAGCATAGGCATGTAGTCAACAAAATAGCAAGAGA  586

seq1  TTATTTTAGATTCATATTTGTAATTTACCAATAATTAACATTTATTTCTA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTAGATTCATATTTGTAATTTACCAATAATTAACATTTATTTCTA  636

seq1  AGCATAAAATTTTCATAATATAGGTTAATTAAAGAAATTGATTGATCCAG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAAAATTTTCATAATATAGGTTAATTAAAGAAATTGATTGATCCAG  686

seq1  AGGACATTTGACACATGTGAGGAATATTAACGTGGATACTGATTTCTTAT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACATTTGACACATGTGAGGAATATTAACGTGGATACTGATTTCTTAT  736

seq1  AGAGATATTTATTTTAGAGTTGGTACTTTAAAACATCTGTGTGAGGGTTA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATATTTATTTTAGAGTTGGTACTTTAAAACATCTGTGTGAGGGTTA  786

seq1  CTTTCCTCCCTTATGTTTAATTATCATCATAATTCTGATTGTGTTCTGAA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTCCCTTATGTTTAATTATCATCATAATTCTGATTGTGTTCTGAA  836

seq1  TGACTACGGAAGGTGAAACAGTCAAAATATTGTCTTAAATCTACCTGTAT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTACGGAAGGTGAAACAGTCAAAATATTGTCTTAAATCTACCTGTAT  886

seq1  TACAATATTACTTATTAATAGTAAATCCTCATGAATACATTATTTATATA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATATTACTTATTAATAGTAAATCCTCATGAATACATTATTTATATA  936

seq1  ATGAGGAAAATCACTAAGAGCAGACAAGAGTTTGTTGCCGCCTTACGAGA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGAAAATCACTAAGAGCAGACAAGAGTTTGTTGCCGCCTTACGAGA  986

seq1  ACAGTGTGAGTTTCTGTAGTGAGTCTAACCCCGAGGAGGGAATTTAGTGG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGTGAGTTTCTGTAGTGAGTCTAACCCCGAGGAGGGAATTTAGTGG  1036

seq1  CAAAGTATATATTGGTAGAGCAACTGGTTCTTGTAGGGCAACAGAAGGCC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTATATATTGGTAGAGCAACTGGTTCTTGTAGGGCAACAGAAGGCC  1086

seq1  AAGGTGGCATCCATCCCCATTTGAGAGAATTC  1127
      ||||||||||||||||||||||||||||||||
seq2  AAGGTGGCATCCATCCCCATTTGAGAGAATTC  1118