BAC Information

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BAC

Clone NameB6Ng01-266K05
Chromosome2 (Build37)
Map Location 123,284,616 - 123,285,756
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc28a2, Bambi-ps1, Rp23-357i14.1, Gatm, Spata5l1, AA467197, Slc30a4, Pldn, Sqrdl
Downstream gene4930517E11Rik, LOC100043360
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266K05.bB6Ng01-266K05.g
ACCGA069985GA069986
length1,1831,145
definitionB6Ng01-266K05.b B6Ng01-266K05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgtcccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaagtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttatatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgcccacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaagtacccaaggagctaaagggatctgcacccta
taggtggatcacattatgactaaccagtacccaggaactcttgactctag
ctgcaatatgtatcaaaagatggctagtcggcatcactggagagagagcc
caattggacacgcaactttatatgcccaaatacaggaacgccagggcaaa
tggggagtgggtggcacgaggggtgtgtggggg
gaattctcacctgggaattggataaaaattccaatctggaaaaaagtatg
catgtgccttccacacctcattccttactctatgaaatgaacatttagtg
tattcaccagcatatcaattcacagtgatattgctgttcaggaagcacac
tatgaaaatgctacaggccaatttaaatagaatctcttttgaatagaaga
gactgcataacttcagctattaaaaccgttctttattttcaggtttatct
aatagaactttgagtaatgtatttcttaattctattttatgatcagtctt
tcctatgacttccctttttcaaaaatgcatgtctcctcatgtgaaatttt
acttgggttttgaggttttagttcagagaatttaattaaaaccatcagag
ggaagaaaagctgacacattttgtgacaaactatcactaagactgaaaat
attctgttggtactaaaaactttaattaattaaaaatattttatatttat
tttatgtgtatggatattttgattacgtgtgtttgtgtgtgccacttttg
ggcctggcgcccatgttggccagaagaggattttctatcccttagtcctg
gagttacatatggttgtttctgtgagtgacggaaataggatttgggttct
ctgaaggacagccagtgttcttaacaaccaagccatttctccaccctcta
atttcttatttgtttgtttattatttattaggtttatctgtttgcttgtt
tagtgataatcattcctcttttctttccttttttttttttcccttacttt
acttttcttctaattccatcccattagcactgactgatgttctctgggac
agaatgccccaatttaaatggaacaggcggagctcccaaagtctcaaact
ctctactattcactcaccattcccccaattgggatcatttgtaaaagggc
tagatctcctggaactctcccaatgttggagacatctcctacatcttcaa
atatattcacagcatttttatagcatggaacttattgaggtactaagaag
acaggtcattcatgctttatgatgtatatgtaacatgtgtatgtgtctgc
tgtgactgtgtcctgtgactgtgcatatggtatatattgtatgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_123284616_123285756
seq2: B6Ng01-266K05.g_68_1212

seq1  GAATTCTCACCTGGGAATTGGATAAAAATTCCAATCTGGAAAAAAGTATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACCTGGGAATTGGATAAAAATTCCAATCTGGAAAAAAGTATG  50

seq1  CATGTGCCTTCCACACCTCATTCCTTACTCTATGAAATGAACATTTAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGCCTTCCACACCTCATTCCTTACTCTATGAAATGAACATTTAGTG  100

seq1  TATTCACCAGCATATCAATTCACAGTGATATTGCTGTTCAGGAAGCACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCACCAGCATATCAATTCACAGTGATATTGCTGTTCAGGAAGCACAC  150

seq1  TATGAAAATGCTACAGGCCAATTTAAATAGAATCTCTTTTGAATAGAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAAATGCTACAGGCCAATTTAAATAGAATCTCTTTTGAATAGAAGA  200

seq1  GACTGCATAACTTCAGCTATTAAAACCGTTCTTTATTTTCAGGTTTATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGCATAACTTCAGCTATTAAAACCGTTCTTTATTTTCAGGTTTATCT  250

seq1  AATAGAACTTTGAGTAATGTATTTCTTAATTCTATTTTATGATCAGTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAACTTTGAGTAATGTATTTCTTAATTCTATTTTATGATCAGTCTT  300

seq1  TCCTATGACTTCCCTTTTTCAAAAATGCATGTCTCCTCATGTGAAATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATGACTTCCCTTTTTCAAAAATGCATGTCTCCTCATGTGAAATTTT  350

seq1  ACTTGGGTTTTGAGGTTTTAGTTCAGAGAATTTAATTAAAACCATCAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGGTTTTGAGGTTTTAGTTCAGAGAATTTAATTAAAACCATCAGAG  400

seq1  GGAAGAAAAGCTGACACATTTTGTGACAAACTATCACTAAGACTGAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAAAAGCTGACACATTTTGTGACAAACTATCACTAAGACTGAAAAT  450

seq1  ATTCTGTTGGTACTAAAAACTTTAATTAATTAAAAATATTTTATATTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTTGGTACTAAAAACTTTAATTAATTAAAAATATTTTATATTTAT  500

seq1  TTTATGTGTATGGATATTTTGATTACGTGTGTTTGTGTGTGCCACTTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTGTATGGATATTTTGATTACGTGTGTTTGTGTGTGCCACTTTTG  550

seq1  GGCCTGGCGCCCATGTTGGCCAGAAGAGGATTTTCTATCCCTTAGTCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGGCGCCCATGTTGGCCAGAAGAGGATTTTCTATCCCTTAGTCCTG  600

seq1  GAGTTACATATGGTTGTTTCTGTGAGTGACGGAAATAGGATTTGGGTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTACATATGGTTGTTTCTGTGAGTGACGGAAATAGGATTTGGGTTCT  650

seq1  CTGAAGGACAGCCAGTGTTCTTAACAACCAAGCCATTTCTCCACCCTCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGGACAGCCAGTGTTCTTAACAACCAAGCCATTTCTCCACCCTCTA  700

seq1  ATTTCTTATTTGTTTGTTTATTATTTATTAGGTTTATCTGTTTGCTTGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTATTTGTTTGTTTATTATTTATTAGGTTTATCTGTTTGCTTGTT  750

seq1  TAGTGATAATCATTCCTCTTTTCTTTCC-TTTTTTTTTTTCCCTTACTTT  799
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TAGTGATAATCATTCCTCTTTTCTTTCCTTTTTTTTTTTTCCCTTACTTT  800

seq1  ACTTTTCTTCTAATTCCATCCCATTAGCACTGACTGATGTTCTCT-GGAC  848
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ACTTTTCTTCTAATTCCATCCCATTAGCACTGACTGATGTTCTCTGGGAC  850

seq1  AGAATGCCCCAA-TTAAATGGAACAGGCGGAGCTCCCAAAGTCTCAAACT  897
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AGAATGCCCCAATTTAAATGGAACAGGCGGAGCTCCCAAAGTCTCAAACT  900

seq1  CTCTACTATTCACTCACCATTCCCCCAATTGGGATCATTTGTAAAAGGGC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACTATTCACTCACCATTCCCCCAATTGGGATCATTTGTAAAAGGGC  950

seq1  TAGATCTCCTGGAACTCTCCCAATGTTGGAGACATTCTCCTACATCTTTC  997
      |||||||||||||||||||||||||||||||||| ||||||||||| |||
seq2  TAGATCTCCTGGAACTCTCCCAATGTTGGAGACA-TCTCCTACATC-TTC  998

seq1  AAATATATTCACAAGCA-TTTTATAGCATGGAACTTATTGAGTTACTAAG  1046
      |||||||||||| |||| |||||||||||||||||||||||| |||||||
seq2  AAATATATTCAC-AGCATTTTTATAGCATGGAACTTATTGAGGTACTAAG  1047

seq1  AGAACAAGGTCATTCATG-TTTATGATGTATATGT-ACATGTGTATGTGT  1094
      |  || |||||||||||| |||||||||||||||| ||||||||||||||
seq2  AAGAC-AGGTCATTCATGCTTTATGATGTATATGTAACATGTGTATGTGT  1096

seq1  CTGTCTGTGACTGTGT-CTGTGACTGTGTATAT-GTATATA-TGTATGTG  1141
      ||| |||||||||||| ||||||||||| |||| ||||||| ||||||||
seq2  CTG-CTGTGACTGTGTCCTGTGACTGTGCATATGGTATATATTGTATGTG  1145