BAC Information

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BAC

Clone NameB6Ng01-266N19
Chromosome2 (Build37)
Map Location 167,339,240 - 167,511,533
singlet/doubletdoublet
Overlap geneZfp313, Snai1, Ube2v1, AI840826
Upstream geneBC067047, Trp53rk, Arfgef2, LOC670802, Cse1l, Stau1, LOC383774, Ddx27, AI481105, 1500012F01Rik, LOC668950, Kcnb1, Ptgis, LOC668951, B4galt5, Slc9a8, Spata2
Downstream geneCebpb, LOC100043728, Ptpn1, 2310033K02Rik, Pard6b, Adnp, Dpm1, Mocs3, LOC100043908, Kcng1, LOC668952, Nfatc2, Atp9a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266N19.bB6Ng01-266N19.g
ACCGA070147GA070148
length1,087303
definitionB6Ng01-266N19.b B6Ng01-266N19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(167,339,240 - 167,340,330)(167,511,231 - 167,511,533)
sequence
gaattcagcatttgagtattttgtctgggcaagatgtgtgtactattttc
tggaccattcactttccattgaggaaggaattttgttttggtagtgtgag
catccgcacacttgggatgcaatctgcatgcatggacagagctaggtatc
aacatcagatgtcttacgggtatctccacctagactggctagtggggcga
gcctctgtggtccgtgtctccagtggagagcactgagatctcaggcgtgc
acccgataccctcttcttacaatggcggtggggatctagactcaggttct
tatgcttgacacagtacgcactttaccaccacagtaatctctgcagcccc
aggaatggctacttcctaatttttagatttaattaatctctttttggttt
tttgagacagggtttctctgtgtagccctggctgtcctggaactcattct
gtagaccaggctggcctcgaactcagaaatctgcctgcctctgcctcccg
agtgctgggattaaaggcgtgcgccaccacgcccggcttagatttaatta
attaattttattttatttttatgggtgttttcctgaatatatgtttgtat
accacatgtgtccagagcctgccagaggtcaggtgttggattccctggga
ctggagttagatggttatgatctaccatgggtgataggaagtgaacctga
ctcctaactgctgagctgtctcttcagcaccaaactgttactattattta
atgatgagacagcaaagacacagagagatgaagtcattttcccagttcca
caacaactagacagggtcctggggtcctcagcagccctctctagacactc
ttgggaggctcttttgaagtgactcttctgggtgtgagcaggtactcagc
tgctgtctgtcttctctgccctcaggattacgatgttgatgaagatgaca
tgataaaccaggtgttgcagcgcctccatcattgaccatgaatcggtcct
gctgtccaccttcactctagagcttcattgtgcataggtgtgagcccctt
gactcctgcacctcacatgtaatgcagatctgaattg
attcctaatgtgtaaaaaccagagacttcacaccgcgcttccaatttcca
gttcttcctctgaacttgggtccctgaactggcctctctggtgtggtagc
tgtggctgtgatggttgctaaggcatttccagtatgggttgtatacactc
tgctgtgggaggacttagcccatctgcaggaggaggaggaggctgaagct
gacactgagccccctcctccccactttcaccccctttctgcccgcagcag
ctgtgactctttacagattgtacagccagggaccctccttactagggtgc
tcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_167339240_167340330
seq2: B6Ng01-266N19.b_49_1135

seq1  GAATTCAGCATTTGAGTATTTTGTCTGGGCAAGATGTGTGTACTATTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCATTTGAGTATTTTGTCTGGGCAAGATGTGTGTACTATTTTC  50

seq1  TGGACCATTCACTTTCCATTGAGGAAGGAATTTTGTTTTGGTAGTGTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACCATTCACTTTCCATTGAGGAAGGAATTTTGTTTTGGTAGTGTGAG  100

seq1  CATCCGCACACTTGGGATGCAATCTGCATGCATGGACAGAGCTAGGTATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCGCACACTTGGGATGCAATCTGCATGCATGGACAGAGCTAGGTATC  150

seq1  AACATCAGATGTCTTACGGGTATCTCCACCTAGACTGGCTAGTGGGGCGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCAGATGTCTTACGGGTATCTCCACCTAGACTGGCTAGTGGGGCGA  200

seq1  GCCTCTGTGGTCCGTGTCTCCAGTGGAGAGCACTGAGATCTCAGGCGTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGTGGTCCGTGTCTCCAGTGGAGAGCACTGAGATCTCAGGCGTGC  250

seq1  ACCCGATACCCTCTTCTTACAATGGCGGTGGGGATCTAGACTCAGGTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCGATACCCTCTTCTTACAATGGCGGTGGGGATCTAGACTCAGGTTCT  300

seq1  TATGCTTGACACAGTACGCACTTTACCACCACAGTAATCTCTGCAGCCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTTGACACAGTACGCACTTTACCACCACAGTAATCTCTGCAGCCCC  350

seq1  AGGAATGGCTACTTCCTAATTTTTAGATTTAATTAATCTCTTTTTGGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATGGCTACTTCCTAATTTTTAGATTTAATTAATCTCTTTTTGGTTT  400

seq1  TTTGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCATTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCATTCT  450

seq1  GTAGACCAGGCTGGCCTCGAACTCAGAAATCTGCCTGCCTCTGCCTCCCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACCAGGCTGGCCTCGAACTCAGAAATCTGCCTGCCTCTGCCTCCCG  500

seq1  AGTGCTGGGATTAAAGGCGTGCGCCACCACGCCCGGCTTAGATTTAATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTGGGATTAAAGGCGTGCGCCACCACGCCCGGCTTAGATTTAATTA  550

seq1  ATTAATTTTATTTTATTTTTATGGGTGTTTTCCTGAATATATGTTTGTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTTTATTTTATTTTTATGGGTGTTTTCCTGAATATATGTTTGTAT  600

seq1  ACCACATGTGTCCAGAGCCTGCCAGAGGTCAGGTGTTGGATTCCCTGGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACATGTGTCCAGAGCCTGCCAGAGGTCAGGTGTTGGATTCCCTGGGA  650

seq1  CTGGAGTTAGATGGTTATGATCTACCATGGGTGATAGGAAGTGAACCTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGTTAGATGGTTATGATCTACCATGGGTGATAGGAAGTGAACCTGA  700

seq1  CTCCTAACTGCTGAGCTGTCTCTTCAGCACCAAACTGTTACTATTATTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTAACTGCTGAGCTGTCTCTTCAGCACCAAACTGTTACTATTATTTA  750

seq1  ATGATGAGACAGCAAAGACACAGAGAGATGAAGTCATTTTCCCAGTTCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGAGACAGCAAAGACACAGAGAGATGAAGTCATTTTCCCAGTTCCA  800

seq1  CAACAACTAGACAGGGTCCTGGGGTCCTCAGCAGCCCTCTCTAGACACTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAACTAGACAGGGTCCTGGGGTCCTCAGCAGCCCTCTCTAGACACTC  850

seq1  TTGGGAGGCTCTTTTGAAGTGACTCTTCTGGGTGTGAGCAGGTACTCAGG  900
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTGGGAGGCTCTTTTGAAGTGACTCTTCTGGGTGTGAGCAGGTACTCA-G  899

seq1  CTGCTGTCTGTCTTCTCTGCCCTCAGGATTACGATGTTGATGAAGATGAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGTCTGTCTTCTCTGCCCTCAGGATTACGATGTTGATGAAGATGAC  949

seq1  ATGATAAACCAGGTGTTGCAGCG-CTCCATCATTGACCAATGAATCGGGT  999
      ||||||||||||||||||||||| |||||||||||||| ||||||| |||
seq2  ATGATAAACCAGGTGTTGCAGCGCCTCCATCATTGACC-ATGAATC-GGT  997

seq1  CCTGGCTGTCCACC-TCACTCTAGAGCTTCCATTGTGCATTAGGTGTGAG  1048
      ||| |||||||||| |||||||||||||| ||||||||| ||||||||||
seq2  CCT-GCTGTCCACCTTCACTCTAGAGCTT-CATTGTGCA-TAGGTGTGAG  1044

seq1  -CCCTTGACTCTTGCACCTCACATGTAATGCAGATCTGGAATTG  1091
       |||||||||| ||||||||||||||||||||||||| ||||||
seq2  CCCCTTGACTCCTGCACCTCACATGTAATGCAGATCT-GAATTG  1087

seq1: chr2_167511231_167511533
seq2: B6Ng01-266N19.g_73_375 (reverse)

seq1  GGAGCACCCTTGTAAGGAGGGTCCCTGGCTGTCCCATCTGTACTGAGTCA  50
      |||||||||| ||||||||||||||||||||| | |||||||  ||||||
seq2  GGAGCACCCTAGTAAGGAGGGTCCCTGGCTGTACAATCTGTAAAGAGTCA  50

seq1  CAGCTGCTGCTTGCAGGCTGGGGGTGAGGGTGGGGAGGAGGGGGCTCAGC  100
      ||||||||||  ||||   ||||||||  |||||||||||||||||||| 
seq2  CAGCTGCTGCGGGCAGAAAGGGGGTGAAAGTGGGGAGGAGGGGGCTCAGT  100

seq1  TTCAGCTTCAGCCTCCTCCTCCTCCTGCAGATGGGCTAAGTCCTCCCACA  150
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGCTTCAGCCTCCTCCTCCTCCTGCAGATGGGCTAAGTCCTCCCACA  150

seq1  GCAGAGTGTATACAACCCATACTGGAAATGCCTTAGCAACCATCACAGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGTGTATACAACCCATACTGGAAATGCCTTAGCAACCATCACAGCC  200

seq1  ACAGCTACCACACCAGAGAGGCCAGTTCAGGGACCCAAGTTCAGAGGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTACCACACCAGAGAGGCCAGTTCAGGGACCCAAGTTCAGAGGAAG  250

seq1  AACTGGAAATTGGAAGCGCGGTGTGAAGTCTCTGGTTTTTACACATTAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGAAATTGGAAGCGCGGTGTGAAGTCTCTGGTTTTTACACATTAGG  300

seq1  AAT  303
      |||
seq2  AAT  303