BAC Information

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BAC

Clone NameB6Ng01-266O14
Chromosome2 (Build37)
Map Location 119,141,920 - 119,295,541
singlet/doubletdoublet
Overlap geneLOC100043609, Dll4, Chac1, Inoc1
Upstream geneGpr176, Eif2ak4, Srp14, LOC668859, Bmf, LOC640461, Bub1b, Pak6, Gm1337, Plcb2, LOC100043272, A430105I19Rik, Disp2, D2Ertd750e, Ivd, Bahd1, Chst14, LOC677379, Ccdc32, Rpusd2, Casc5, Rad51, 1200015F23Rik, Gchfr, Dnajc17, OTTMUSG00000015762, LOC545640, Zfyve19, Ppp1r14d, Spint1, Rhov, Vps18
Downstream geneLOC100043612, Exdl1, 1500003O03Rik, LOC100043307, Oip5, Nusap1, Ndufaf1, LOC625328, LOC100043622, Rtf1, Itpka, Ltk, Rpap1, Tyro3, 6330405D24Rik, LOC625403, Mga, Mapkbp1, Pla2g4b, Spnb5, Ehd4, Pla2g4e, LOC100043635, Pla2g4d, Pla2g4f, Vps39, Tmem87a, Ganc, Capn3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266O14.bB6Ng01-266O14.g
ACCGA070185GA070186
length757962
definitionB6Ng01-266O14.b B6Ng01-266O14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,141,920 - 119,142,676)(119,294,911 - 119,295,541)
sequence
gaattcattcacctggtgagtttccataccgcaaccactaagctcatatc
caacctcacaagttagtgttctgtcctctacccgactctgccagggatac
ctgctaattccctctctcacctgctaattccctctctcatcctgggcctc
tcagtgccctgttctcctcccctctttgtaaggacagctcccgggctgga
gagatagctatgtggttaagagtttgctgctattcgagaagaccagagtt
aggttcccagcacccaggccagggagctcacaactaccaagacaggtgat
ccagcgccctcttctggcctctctaggcacctgcacacacataggaagca
cagacacatatacacaaacacataagtcaaataaacacatactataaagt
tctggggtttggagttttctttccaggtccagtgtaaaccctgcctccca
tacaaatcttcctctgagacttggttccatctgctagctaccacactctt
tttcttttcttttctttctagttttcttctcattttgtattgtttaaagt
ttgtttttgcaacatagtttctctgtgtggtcctgagtgtcctaaaactt
gctctgtagaccaggctagcctcaaactcagagatctgcctgcctctgcc
tcacaaatgctggtatttaagggatgcactatcatgcccagcttctcttt
ttcttttaaaactatattatgagttagcattgtgtgtagtgtgtgtgtgc
atgtgtg
gaattcttaacctaatgggtgttacctaaagcatcacattgaatggctcc
tccttaatgtgttaattggcatatctacctggaatgctggacgctggtgt
tcagtttcccaagagtgaaattgtatggttttgcagggtattgtggtgta
cacttaagttggaggtagaagcaggaggatcactgcagttttgaagtcgg
tttatctagcaagttccaggttagccagacagtacactctgactcaaaaa
ccagccaccaccctcaaaacaaatgaaaaagcaataaaaatcttaccgaa
aactttaggtttctttataaaatacatttctgtaacctggctgtggtagc
acacagctaaaatcccagctctgacagaaagcaggagaaccaggaattca
aggttatctactgagagccagtaatagtttagaatgtggtagtatagtat
ttagggtctggtgatacacctcagttggtagagcgcttatctaccatata
taaagtcttggatttgacccatattaacacataggacaggtgtggtgaca
cacacctctaatcccaggattcaggagatggcagcaggtggactaaaagt
tcacggtcactgagttcagtgccagcttgcccaaattaaaagacttgggt
ttaataactggttgtggcagtgagtgcctgtaatttccagctcctgggaa
actgaggctggaagattgcttggagttggaggccagcttggattagaaaa
tgagttcaaaggggctggagagatggctcagcggttaagagctctgggct
gttcttccagatgtcctgagttccattcccagcaaccacatggtggctca
caaccatctgcaatgggatccagtgccctctttagtgtgtctgagacagc
tattagtgtactcatattacataaaataaatgaattaatgttaaagaaag
gaaaaaagaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_119141920_119142676
seq2: B6Ng01-266O14.b_47_803

seq1  GAATTCATTCACCTGGTGAGTTTCCATACCGCAACCACTAAGCTCATATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCACCTGGTGAGTTTCCATACCGCAACCACTAAGCTCATATC  50

seq1  CAACCTCACAAGTTAGTGTTCTGTCCTCTACCCGACTCTGCCAGGGATAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTCACAAGTTAGTGTTCTGTCCTCTACCCGACTCTGCCAGGGATAC  100

seq1  CTGCTAATTCCCTCTCTCACCTGCTAATTCCCTCTCTCATCCTGGGCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTAATTCCCTCTCTCACCTGCTAATTCCCTCTCTCATCCTGGGCCTC  150

seq1  TCAGTGCCCTGTTCTCCTCCCCTCTTTGTAAGGACAGCTCCCGGGCTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGCCCTGTTCTCCTCCCCTCTTTGTAAGGACAGCTCCCGGGCTGGA  200

seq1  GAGATAGCTATGTGGTTAAGAGTTTGCTGCTATTCGAGAAGACCAGAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAGCTATGTGGTTAAGAGTTTGCTGCTATTCGAGAAGACCAGAGTT  250

seq1  AGGTTCCCAGCACCCAGGCCAGGGAGCTCACAACTACCAAGACAGGTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCCCAGCACCCAGGCCAGGGAGCTCACAACTACCAAGACAGGTGAT  300

seq1  CCAGCGCCCTCTTCTGGCCTCTCTAGGCACCTGCACACACATAGGAAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCGCCCTCTTCTGGCCTCTCTAGGCACCTGCACACACATAGGAAGCA  350

seq1  CAGACACATATACACAAACACATAAGTCAAATAAACACATACTATAAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACACATATACACAAACACATAAGTCAAATAAACACATACTATAAAGT  400

seq1  TCTGGGGTTTGGAGTTTTCTTTCCAGGTCCAGTGTAAACCCTGCCTCCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGGTTTGGAGTTTTCTTTCCAGGTCCAGTGTAAACCCTGCCTCCCA  450

seq1  TACAAATCTTCCTCTGAGACTTGGTTCCATCTGCTAGCTACCACACTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAATCTTCCTCTGAGACTTGGTTCCATCTGCTAGCTACCACACTCTT  500

seq1  TTTCTTTTCTTTTCTTTCTAGTTTTCTTCTCATTTTGTATTGTTTAAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTCTTTTCTTTCTAGTTTTCTTCTCATTTTGTATTGTTTAAAGT  550

seq1  TTGTTTTTGCAACATAGTTTCTCTGTGTGGTCCTGAGTGTCCTAAAACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTTGCAACATAGTTTCTCTGTGTGGTCCTGAGTGTCCTAAAACTT  600

seq1  GCTCTGTAGACCAGGCTAGCCTCAAACTCAGAGATCTGCCTGCCTCTGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGTAGACCAGGCTAGCCTCAAACTCAGAGATCTGCCTGCCTCTGCC  650

seq1  TCACAAATGCTGGTATTTAAGGGATGCACTATCATGCCCAGCTTCTCTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAATGCTGGTATTTAAGGGATGCACTATCATGCCCAGCTTCTCTTT  700

seq1  TTCTTTTAAAACTATATTATGAGTTAGCATTGTGTGTAGTGTGTGTGTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTAAAACTATATTATGAGTTAGCATTGTGTGTAGTGTGTGTGTGC  750

seq1  ATGTGTG  757
      |||||||
seq2  ATGTGTG  757

seq1: chr2_119294911_119295541
seq2: B6Ng01-266O14.g_68_698 (reverse)

seq1  GGCAAGCTGGCACTGAACTCAGTGACCGTGAACTTTTAGTCCACCTGCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGCTGGCACTGAACTCAGTGACCGTGAACTTTTAGTCCACCTGCTG  50

seq1  CCATCTCCTGAATCCTGGGATTAGAGGTGTGTGTCACCACACCTGTCCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTCCTGAATCCTGGGATTAGAGGTGTGTGTCACCACACCTGTCCTA  100

seq1  TGTGTTAATATGGGTCAAATCCAAGACTTTATATATGGTAGATAAGCGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTAATATGGGTCAAATCCAAGACTTTATATATGGTAGATAAGCGCT  150

seq1  CTACCAACTGAGGTGTATCACCAGACCCTAAATACTATACTACCACATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCAACTGAGGTGTATCACCAGACCCTAAATACTATACTACCACATTC  200

seq1  TAAACTATTACTGGCTCTCAGTAGATAACCTTGAATTCCTGGTTCTCCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTATTACTGGCTCTCAGTAGATAACCTTGAATTCCTGGTTCTCCTG  250

seq1  CTTTCTGTCAGAGCTGGGATTTTAGCTGTGTGCTACCACAGCCAGGTTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGTCAGAGCTGGGATTTTAGCTGTGTGCTACCACAGCCAGGTTAC  300

seq1  AGAAATGTATTTTATAAAGAAACCTAAAGTTTTCGGTAAGATTTTTATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGTATTTTATAAAGAAACCTAAAGTTTTCGGTAAGATTTTTATTG  350

seq1  CTTTTTCATTTGTTTTGAGGGTGGTGGCTGGTTTTTGAGTCAGAGTGTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCATTTGTTTTGAGGGTGGTGGCTGGTTTTTGAGTCAGAGTGTAC  400

seq1  TGTCTGGCTAACCTGGAACTTGCTAGATAAACCGACTTCAAAACTGCAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGGCTAACCTGGAACTTGCTAGATAAACCGACTTCAAAACTGCAGT  450

seq1  GATCCTCCTGCTTCTACCTCCAACTTAAGTGTACACCACAATACCCTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTCCTGCTTCTACCTCCAACTTAAGTGTACACCACAATACCCTGCA  500

seq1  AAACCATACAATTTCACTCTTGGGAAACTGAACACCAGCGTCCAGCATTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCATACAATTTCACTCTTGGGAAACTGAACACCAGCGTCCAGCATTC  550

seq1  CAGGTAGATATGCCAATTAACACATTAAGGAGGAGCCATTCAATGTGATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTAGATATGCCAATTAACACATTAAGGAGGAGCCATTCAATGTGATG  600

seq1  CTTTAGGTAACACCCATTAGGTTAAGAATTC  631
      |||||||||||||||||||||||||||||||
seq2  CTTTAGGTAACACCCATTAGGTTAAGAATTC  631