BAC Information

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BAC

Clone NameB6Ng01-267J03
Chromosome2 (Build37)
Map Location 111,290,753 - 111,385,731
singlet/doubletdoublet
Overlap geneOlfr1288, Olfr1289, Olfr1290, GA_x5J8B7W4T2P-95628-96096, Olfr1292-ps1, Olfr1293, Olfr1294
Upstream geneSlc5a12, Muc15, LOC668802, LOC623270, LOC623301, 4930430A15Rik, Olfr1275, Olfr1276, Olfr1277, Olfr1278, Olfr1279, Olfr1280, Olfr1281, Olfr1282, Olfr1283, Olfr1284, LOC100043465, Olfr1285, Olfr1286, Olfr1287
Downstream geneOlfr1295, LOC668822, Olfr1297, Olfr1298, Olfr1299, Olfr1300-ps1, Olfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825, Olfr1305, Olfr1306, LOC668827, Olfr1307, Olfr1308, Olfr1309, LOC433463, Olfr1310, Olfr1311, Olfr1312, Olfr1313, Olfr1314, Olfr1315-ps1, Olfr1316, Olfr1317, Olfr1318, GA_x5J8B7W3P0G-705890-705633, LOC100043187, Agpat7, Nut, Nola3, Slc12a6, Tmem85, EG668839, 2410042D21Rik, 2900064A13Rik, Chrm5, Aven
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267J03.bB6Ng01-267J03.g
ACCGA070657GA070658
length1,0911,159
definitionB6Ng01-267J03.b B6Ng01-267J03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(111,384,681 - 111,385,731)(111,290,753 - 111,291,919)
sequence
gaattctttgttcaggtctgagccccatttttttaatggggttatttgat
tttctggagcccaccttcttaagttctttatatatattggctcttagtcc
cctatctgatttaggataggtaaagatcctttcccaatctgttggtgatt
tttttgtcttgttgatggtgtcttttgccttgcagaagctttgcaacttt
ttgatttcctcccttttcttagttagttttgttttcattgtctttatctc
tgtctgccactagaaaatcttgcagtgctttaactatctcccccaccccc
aattaggcattccaattttagccatcataataggatagaaagattcagac
aacaaacttttaaccctagcttcctctctttgtgaattatttaaagtact
ctgccactaccagaacaaagggctcctctacagaaaatcaagaatttatc
tgtaggaagtcagattaaaacttttctagctcatatacttctcctttaat
ttctttatctttgagaaggaactttgcctcctgtgccaaagctgttttct
tgaacaggtggcaaagtttcattccactcttggtttacttacttacttaa
tttatttatttattttaattgacttatttattttcatcccatacactgca
ccccatattcccccctcactgagaccctcttctccattacttttcccctt
ctcttctaggaaggtgggtgtgccctgggtaccccccccccccacatggt
gcaacaaatctctatcagattaggtgtatcctctgtcactaaagcaagaa
aagacagcactgttgggaaaaagataccacagtcaggttcagctttagtg
agagtctctgctctagttgtctgggggaaccatatggcaacctagctgca
catcttgctatatatgtgccagaggtttcattccagtctatgagtgttct
ttggtggtctggattctgagagttcctagaggtccagggttggtttgact
ctgtgttcttcttaatggggttctcactccttatgatgctctctgaaagc
acaataggtatcaatacagtgtcagggattgctcttggcca
gaattcagaatgttttatttcatttcttaacagaaaagacaatttgttca
aaatattttaatatacttttctcaattcaaacattatttgtatgattatg
atcttatattatataatgaaataccataattgccaggaccagttaggtta
atattatatgctcttgataatatggtctacataatatttcatatatatac
ttgatatagcgtataattttctggataatactatatgtatacatgtttac
aatactttgagtttagtttattactcattagacatgaaagccctactttc
ttgaataatgtcctaatattgcatgagctaatgggtaaaatcaatctgta
tgcatatcttaataagttaaagaggttgcagtaacaaaaattatctatct
aagaacaaacacacacctgtttttataaaatcatatgattaaaggtaagt
atgactcaagtctgttcatagacctcgctgcatacatatgtgtagttttt
ggtatccttttcaaaataaaaagatctccatttatagatttatagattta
actagcaacacttttacatctacatattttaattaaatatgttctttaac
aatatctgcaatagttgattgcatcttatttttgcctgtggttttgtatt
tccctaccccgactatttcccctttccccagacacatacaaacacatgag
gatctttgcacatttttgtatttttgtttcatgtgtctgtttgtttttgt
tttcattagtagctcactgttcagcaagaagttgtagaagtccatagcaa
ctctctgatctgtgattgactgttgactttgattttgttgttcaggggcc
atggcagacagcctttgagatcatgactgcatcaactgcgccatgctcac
aagattatacttcacaggttttgcattctttttgtccccttctacattcc
ttctcagaattattttaaaattattttaaatctacagatagttgtctcct
ctcccacaggcatagtagagcaacataacactttaaggatgcttgcaaac
ttaaataataaagtctaaatggatctttattgcctgtttaggttcctagt
gtagtgaaaatgcctatcctggacgaatcaccagccaggcacaggttctc
atgtagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_111384681_111385731
seq2: B6Ng01-267J03.b_91_1137 (reverse)

seq1  TGGGCAAGAACCAATCCCTGACACTGTTAATGATACCCTATTGTGCTTTC  50
      ||| |||| | ||||||||||||||| || ||||| ||||||||||||||
seq2  TGGCCAAG-AGCAATCCCTGACACTG-TATTGATA-CCTATTGTGCTTTC  47

seq1  AGAGAGCCATCATAAAGGGAGTGAGAA-CCCAATAAG-AGAACCAACAGA  98
      |||||| ||||||||  |||||||||| |||| |||| |||||  |||||
seq2  AGAGAG-CATCATAA--GGAGTGAGAACCCCATTAAGAAGAAC--ACAGA  92

seq1  GTC-AACCAA-CCTGGACCTCTAGGAACTCTCAGAATCCAGACCACCAAA  146
      ||| |||||| |||||||||||||||||||||||||||||||||||||||
seq2  GTCAAACCAACCCTGGACCTCTAGGAACTCTCAGAATCCAGACCACCAAA  142

seq1  GAACACTCATAGACTGGAATGAAACCTCTGGCACATATATAGCAAGATGT  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACTCATAGACTGGAATGAAACCTCTGGCACATATATAGCAAGATGT  192

seq1  GCAGCTAGGTTGCCATATGGTTCCCCCAGACAACTAGAGCAGAGACTCTC  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTAGGTTGCCATATGGTTCCCCCAGACAACTAGAGCAGAGACTCTC  242

seq1  ACTAAAGCTGAACCTGACTGTGGTATCTTTTTCCCAACAGTGCTGTCTTT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAGCTGAACCTGACTGTGGTATCTTTTTCCCAACAGTGCTGTCTTT  292

seq1  TCTTGCTTTAGTGACAGAGGATACACCTAATCTGATAGAGATTTGTTGCA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCTTTAGTGACAGAGGATACACCTAATCTGATAGAGATTTGTTGCA  342

seq1  CCATGTGGGGGGGGGGGGTACCCAGGGCACACCCACCTTCCTAGAAGAGA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTGGGGGGGGGGGGTACCCAGGGCACACCCACCTTCCTAGAAGAGA  392

seq1  AGGGGAAAAGTAATGGAGAAGAGGGTCTCAGTGAGGGGGGAATATGGGGT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAAAAGTAATGGAGAAGAGGGTCTCAGTGAGGGGGGAATATGGGGT  442

seq1  GCAGTGTATGGGATGAAAATAAATAAGTCAATTAAAATAAATAAATAAAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGTATGGGATGAAAATAAATAAGTCAATTAAAATAAATAAATAAAT  492

seq1  TAAGTAAGTAAGTAAACCAAGAGTGGAATGAAACTTTGCCACCTGTTCAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTAAGTAAGTAAACCAAGAGTGGAATGAAACTTTGCCACCTGTTCAA  542

seq1  GAAAACAGCTTTGGCACAGGAGGCAAAGTTCCTTCTCAAAGATAAAGAAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACAGCTTTGGCACAGGAGGCAAAGTTCCTTCTCAAAGATAAAGAAA  592

seq1  TTAAAGGAGAAGTATATGAGCTAGAAAAGTTTTAATCTGACTTCCTACAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGGAGAAGTATATGAGCTAGAAAAGTTTTAATCTGACTTCCTACAG  642

seq1  ATAAATTCTTGATTTTCTGTAGAGGAGCCCTTTGTTCTGGTAGTGGCAGA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTCTTGATTTTCTGTAGAGGAGCCCTTTGTTCTGGTAGTGGCAGA  692

seq1  GTACTTTAAATAATTCACAAAGAGAGGAAGCTAGGGTTAAAAGTTTGTTG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTTAAATAATTCACAAAGAGAGGAAGCTAGGGTTAAAAGTTTGTTG  742

seq1  TCTGAATCTTTCTATCCTATTATGATGGCTAAAATTGGAATGCCTAATTG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATCTTTCTATCCTATTATGATGGCTAAAATTGGAATGCCTAATTG  792

seq1  GGGGTGGGGGAGATAGTTAAAGCACTGCAAGATTTTCTAGTGGCAGACAG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGGGGGAGATAGTTAAAGCACTGCAAGATTTTCTAGTGGCAGACAG  842

seq1  AGATAAAGACAATGAAAACAAAACTAACTAAGAAAAGGGAGGAAATCAAA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAAGACAATGAAAACAAAACTAACTAAGAAAAGGGAGGAAATCAAA  892

seq1  AAGTTGCAAAGCTTCTGCAAGGCAAAAGACACCATCAACAAGACAAAAAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGCAAAGCTTCTGCAAGGCAAAAGACACCATCAACAAGACAAAAAA  942

seq1  ATCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGG  992

seq1  GACTAAGAGCCAATATATATAAAGAACTTAAGAAGGTGGGCTCCAGAAAA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAAGAGCCAATATATATAAAGAACTTAAGAAGGTGGGCTCCAGAAAA  1042

seq1  TCAAA  1051
      |||||
seq2  TCAAA  1047

seq1: chr2_111290753_111291919
seq2: B6Ng01-267J03.g_68_1226

seq1  GAATTCAGAATGTTTTATTTCATTTCTTAACAGAAAAGACAATTTGTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAATGTTTTATTTCATTTCTTAACAGAAAAGACAATTTGTTCA  50

seq1  AAATATTTTAATATACTTTTCTCAATTCAAACATTATTTGTATGATTATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTTTAATATACTTTTCTCAATTCAAACATTATTTGTATGATTATG  100

seq1  ATCTTATATTATATAATGAAATACCATAATTGCCAGGACCAGTTAGGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTATATTATATAATGAAATACCATAATTGCCAGGACCAGTTAGGTTA  150

seq1  ATATTATATGCTCTTGATAATATGGTCTACATAATATTTCATATATATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATATGCTCTTGATAATATGGTCTACATAATATTTCATATATATAC  200

seq1  TTGATATAGCGTATAATTTTCTGGATAATACTATATGTATACATGTTTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATATAGCGTATAATTTTCTGGATAATACTATATGTATACATGTTTAC  250

seq1  AATACTTTGAGTTTAGTTTATTACTCATTAGACATGAAAGCCCTACTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTTTGAGTTTAGTTTATTACTCATTAGACATGAAAGCCCTACTTTC  300

seq1  TTGAATAATGTCCTAATATTGCATGAGCTAATGGGTAAAATCAATCTGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATAATGTCCTAATATTGCATGAGCTAATGGGTAAAATCAATCTGTA  350

seq1  TGCATATCTTAATAAGTTAAAGAGGTTGCAGTAACAAAAATTATCTATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATATCTTAATAAGTTAAAGAGGTTGCAGTAACAAAAATTATCTATCT  400

seq1  AAGAACAAACACACACCTGTTTTTATAAAATCATATGATTAAAGGTAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACAAACACACACCTGTTTTTATAAAATCATATGATTAAAGGTAAGT  450

seq1  ATGACTCAAGTCTGTTCATAGACCTCGCTGCATACATATGTGTAGTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTCAAGTCTGTTCATAGACCTCGCTGCATACATATGTGTAGTTTTT  500

seq1  GGTATCCTTTTCAAAATAAAAAGATCTCCATTTATAGATTTATAGATTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATCCTTTTCAAAATAAAAAGATCTCCATTTATAGATTTATAGATTTA  550

seq1  ACTAGCAACACTTTTACATCTACATATTTTAATTAAATATGTTCTTTAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGCAACACTTTTACATCTACATATTTTAATTAAATATGTTCTTTAAC  600

seq1  AATATCTGCAATAGTTGATTGCATCTTATTTTTGCCTGTGGTTTTGTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCTGCAATAGTTGATTGCATCTTATTTTTGCCTGTGGTTTTGTATT  650

seq1  TCCCTACCCCGACTATTTCCCCTTTCCCCAGACACATACAAACACATGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTACCCCGACTATTTCCCCTTTCCCCAGACACATACAAACACATGAG  700

seq1  GATCTTTGCACATTTTTGTATTTTTGTTTCATGTGTCTGTTTGTTTTTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTTGCACATTTTTGTATTTTTGTTTCATGTGTCTGTTTGTTTTTGT  750

seq1  TTTCATTAGTAGCTCACTGTTCAGCAAGAAGTTGTAGAAGTCCATAGCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTAGTAGCTCACTGTTCAGCAAGAAGTTGTAGAAGTCCATAGCAA  800

seq1  CTCTCTGATCTGTGATTGACTGTTGACTTTGATTTTGTTGTTCAGGGGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGATCTGTGATTGACTGTTGACTTTGATTTTGTTGTTCAGGGGCC  850

seq1  ATGGCAGACAGCC-TTGAGATCATGACTGCATCAACTGCGCCATGCTCAC  899
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ATGGCAGACAGCCTTTGAGATCATGACTGCATCAACTGCGCCATGCTCAC  900

seq1  AAGATTATACTTCACAGGTTTTGCATTCTTTTTGTCCCCTTCTACATTCC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTATACTTCACAGGTTTTGCATTCTTTTTGTCCCCTTCTACATTCC  950

seq1  TTCTCAGAATTATTTTAAAATTATTTTAAATCTACAGATAGTTTGTCCTC  999
      ||||||||||||||||||||||||||||||||||||||||| |||| |||
seq2  TTCTCAGAATTATTTTAAAATTATTTTAAATCTACAGATAG-TTGT-CTC  998

seq1  CTCTCCCACAGGCATAGTAGAGCAACATAACACTTTAAGGATGCCTTGCA  1049
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTCTCCCACAGGCATAGTAGAGCAACATAACACTTTAAGGATG-CTTGCA  1047

seq1  AAACTAAATAATTAAGTTCTAAAATGATCTTTTATTGCCTGTTTAGTTTC  1099
      ||  |||||||| ||| ||||||  |||| |||||||||||||||| |||
seq2  AACTTAAATAATAAAG-TCTAAATGGATC-TTTATTGCCTGTTTAGGTTC  1095

seq1  TAAGTGTTAGTTGAAAATGGCTTATTCCTGGACAGATCACACCAAGCAAG  1149
        |||| ||| |||||||| ||   ||||||||  ||  |||||  || |
seq2  CTAGTG-TAG-TGAAAATGCCT--ATCCTGGACGAAT--CACCAGCCAGG  1139

seq1  CACA-GTTCTCATG-AGAGA  1167
      |||| ||||||||| |||||
seq2  CACAGGTTCTCATGTAGAGA  1159