BAC Information

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BAC

Clone NameB6Ng01-267L04
Chromosome2 (Build37)
Map Location 152,533,194 - 152,533,766
singlet/doubletsinglet
Overlap genenone
Upstream genePsmf1, Rspo4, Angpt4, 5430432M24Rik, 2310046K01Rik, Scrt2, Srxn1, Tcf15, LOC100043843, Csnk2a1, Tbc1d20, Rbck1, Trib3, LOC628060, Nrsn2, Sox12, Zcchc3, 6820408C15Rik, EG629114, LOC668930, 9230107O10Rik, 9230002F21Rik, EG654457, OTTMUSG00000015852, Defb29, 4930525K10Rik, Defb19, OTTMUSG00000015859, Defb36, OTTMUSG00000015862, Rem1, H13, Mcts2
Downstream geneId1, LOC629170, Cox4i2, Bcl2l1, Tpx2, Mylk2, Fkhl18, Dusp15, Ttll9, Pdrg1, Xkr7, BC020535, Hck, Tm9sf4, Tspyl3, Plagl2, Pofut1, Kif3b, 2500004C02Rik, Asxl1, 8430427H17Rik, Commd7, 7530422B04Rik, Dnmt3b, LOC668932
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267L04.g
ACCGA070751
length924
definitionB6Ng01-267L04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttgttgtttacctttggggaaactaacctaaactcttagggctc
taaaagactgaaacacctggttaagaacatgcatgggctggaccaaggcc
tcatggcacatatataacagatgtgaagcttgatcttcatgtgggtcctg
aacaactggagtgggtgctatcccaaaatatttgcctgtatttgggaaac
gttcttctgaatagtctgccttgactggtgggagtgggacagaaataact
tcccctcacatggacttgtgccgggaataatgaataccttgagggccccc
acccgctcagagaagaatgggaagggggtgatagaactattgcgggacgg
gtgggcaaagcaagggtctgtgccatccagctgcccttgcacaaaacgac
aaactcagtgctcccgccaccaccccaggaaaaaaaaagccaggctggca
ggggtctctgcggcagcctgcgcctccttcctgttctccaactatggact
ccccgcgtgactgccggccacgggaggagcggcatcctgcggggtgcgcc
aggaagggccttgcaagcgggaaggaaagcgccacctctctcgcccccgc
caaggccacacctgggctccgcaggcggtagcgccgggccagcgcctggc
tccagcgagtctgggccgccctccctacgcactgcgggggccgccagctg
ggctggtcgctcgcgcagctccgccgtcggaagctgttcactgggggggc
gtggtccgtgttggtcccaacccaggaggcaggttcactgtagcccaagg
acaagctttggaatttcggctggctttacagtctcatttgtgtttttctt
tcctcccagtccaggggaacgaaaccgtgctaagtgagcgctatatcact
gagactggatccccgaaactcctt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_152533194_152533766
seq2: B6Ng01-267L04.g_415_989

seq1  GGTGGGCAAAGCAAGGGTCTGTGCCATCCAGCTGCCCTTGCACAAAACGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGCAAAGCAAGGGTCTGTGCCATCCAGCTGCCCTTGCACAAAACGA  50

seq1  CAAACTCAGTGCTCCCGCCACCACCCCAGGAAAAAAAAAGCCAGGCTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTCAGTGCTCCCGCCACCACCCCAGGAAAAAAAAAGCCAGGCTGGC  100

seq1  AGGGGTCTCTGCGGCAGCCTGCGCCTCCTTCCTGTTCTCCAACTATGGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTCTCTGCGGCAGCCTGCGCCTCCTTCCTGTTCTCCAACTATGGAC  150

seq1  TCCCCGCGTGACTGCCGGCCACGGGAGGAGCGGCATCCTGCGGGGTGCGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCGCGTGACTGCCGGCCACGGGAGGAGCGGCATCCTGCGGGGTGCGC  200

seq1  CAGGAAGGGCCTTGCAAGCGGGAAGGAAAGCGCCACCTCTCTCGCCCCCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAGGGCCTTGCAAGCGGGAAGGAAAGCGCCACCTCTCTCGCCCCCG  250

seq1  CCAAGGCCACACCTGGGCTCCGCAGGCGGTAGCGCCGGGCCAGCGCCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGCCACACCTGGGCTCCGCAGGCGGTAGCGCCGGGCCAGCGCCTGG  300

seq1  CTCCAGCGAGTCTGGGCCGCCCTCCCTACGCACTGCGGGGGCCGCCAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGCGAGTCTGGGCCGCCCTCCCTACGCACTGCGGGGGCCGCCAGCT  350

seq1  GGGCTGGTCGCTCGCGCAGCTCCGCGGCCGGAAGCTGTTCACT-GGGGGG  399
      ||||||||||||||||||||||||| | ||||||||||||||| ||||||
seq2  GGGCTGGTCGCTCGCGCAGCTCCGCCGTCGGAAGCTGTTCACTGGGGGGG  400

seq1  CGTGGTCCGTGTTGGTCCC-ACCCAGGAGGGCAGGGTCACTGTAGCCCAA  448
      ||||||||||||||||||| |||||||| |||||| ||||||||||||||
seq2  CGTGGTCCGTGTTGGTCCCAACCCAGGA-GGCAGGTTCACTGTAGCCCAA  449

seq1  GGACAAGCTTTGGAATTTCGGCTGGCTTTACAGTCTCCATTTGTGTTTTT  498
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GGACAAGCTTTGGAATTTCGGCTGGCTTTACAGTCT-CATTTGTGTTTTT  498

seq1  CTTTCCTCCCAGTCCCAGGGGACCG-AACCGTGCTAAGTGAGCGCTATAT  547
      ||||||||||||| |||||||| || ||||||||||||||||||||||||
seq2  CTTTCCTCCCAGT-CCAGGGGAACGAAACCGTGCTAAGTGAGCGCTATAT  547

seq1  CACTGAG-CTGTATCCCCGAAAC-CCTT  573
      ||||||| ||| ||||||||||| ||||
seq2  CACTGAGACTGGATCCCCGAAACTCCTT  575