BAC Information

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BAC

Clone NameB6Ng01-267O16
Chromosome2 (Build37)
Map Location 159,795,902 - 159,797,010
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043689
Downstream geneGm826, Mafb, LOC100043892, Top1, Plcg1, Zhx3, Lpin3, Emilin3, Chd6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267O16.bB6Ng01-267O16.g
ACCGA070914GA070915
length1,106253
definitionB6Ng01-267O16.b B6Ng01-267O16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgagaaaaatgatctactgaatgtcgggagtattttctttcctt
gatctgtctaggagtgaaaatgttagcctgttgttcaacgctgcctctgc
ggtcagactaaacaatggtgtctattaatcatgggaagagcataggcaaa
caaaaaaggttatttttcctgtgaattgagtcttatggtttgtataatgg
ggttgcaaggttttatgcctcatctaaagaggcctgagctgctcgggctg
tgatagcttacagagctcttggtaaatagttgggggtctggcgtctttaa
tcatcagcacagaagtgagaggaagggactggaaggaaggagagctagtg
ggcagaagagtgaagctaacttagatagacgaggtcacaggagacagggc
tgtagaatgtccacctcagatgaattcccagggtcacatgagccgaggtt
tatcaatcactatgcagggtctagcctggtcttgttgataaactctgtgt
ctctaacttttctaatcagggtcctgttagtaagtcattgattatctctg
ctgcaaaagagctctgcaagtaccagggcccaggaagcttcactcttcct
ttattccagtaaatagcaataatcataatcacaataacccatcaggatct
tcctaatatctgcagcttcagttcctctgggactgtgtgagcatggaaat
cctccacagtttaatgtggcagagccattaggaggtcaacagagtgtaga
accttccttatggcccaagacagacccaggctcccaattttctcatcgta
ttattaaatgtagccaccatcactatgcatctctctgagctctgttctct
ccttccctctctaacaacctgaatctggcacacttcccttcccctttaac
cctcacaagctaaaaataatatcctcttggaacccagccaaaaagtgtca
gttggaggagtttaattagcaagagtgggcaggagacagttcttagcttt
cccaatttgctaataaactctcagggagctggagctagctcaattggaaa
atccagttcatgtgccactgtactgggggtttactgcatgcaaagtctgc
ttagaa

agaaagacaatggctatgtgtgttcagagtctggctttggtgggagaaga
agtgcctaaccttcagaggcttgaggctccagggggtagggagacctggc
aggaggtgctgggcaaggggggggaggggagggagacaggggaacatcct
cctgaagacaggcaaggggacgaatgggatgaggaattgtgggagggcag
acccggaagtgggactattaaattaattaaaggaataaaaatcaaacaaa
caa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_159795902_159797010
seq2: B6Ng01-267O16.b_46_1151 (reverse)

seq1  TTCTAGGCAGACTTTGCATGCAAGTTAAGACCCCAGTTACAAGTGCACAT  50
      ||||| ||||||||||||||||   |||  |||||| ||||   ||||||
seq2  TTCTAAGCAGACTTTGCATGCA--GTAAACCCCCAG-TACAGTGGCACAT  47

seq1  GAACCTGGATTTTCCAATTGAGCTTGGCTCCAGCTCCCTGGAGAGTTTA-  99
      ||| ||||||||||||||||||| | ||||||||||||| ||||||||| 
seq2  GAA-CTGGATTTTCCAATTGAGC-TAGCTCCAGCTCCCT-GAGAGTTTAT  94

seq1  TAGCAAATTGGGAAAGCT-AGAACTGTCTCCTGCCCACTCTTGCTAATTA  148
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TAGCAAATTGGGAAAGCTAAGAACTGTCTCCTGCCCACTCTTGCTAATTA  144

seq1  AACTCCTCCAACTGACACTTTTTGGCT-GGTTCCAAGAGGATATTATTTT  197
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AACTCCTCCAACTGACACTTTTTGGCTGGGTTCCAAGAGGATATTATTTT  194

seq1  TAGCTTGTGAGGGTTAAAGGGGAAGGGAAGTGTGCCAGATTCAGGTTGTT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTGTGAGGGTTAAAGGGGAAGGGAAGTGTGCCAGATTCAGGTTGTT  244

seq1  AGAGAGGGAAGGAGAGAACAGAGCTCAGAGAGATGCATAGTGATGGTGGC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGGAAGGAGAGAACAGAGCTCAGAGAGATGCATAGTGATGGTGGC  294

seq1  TACATTTAATAATACGATGAGAAAATTGGGAGCCTGGGTCTGTCTTGGGC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTAATAATACGATGAGAAAATTGGGAGCCTGGGTCTGTCTTGGGC  344

seq1  CATAAGGAAGGTTCTACACTCTGTTGACCTCCTAATGGCTCTGCCACATT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGGAAGGTTCTACACTCTGTTGACCTCCTAATGGCTCTGCCACATT  394

seq1  AAACTGTGGAGGATTTCCATGCTCACACAGTCCCAGAGGAACTGAAGCTG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGTGGAGGATTTCCATGCTCACACAGTCCCAGAGGAACTGAAGCTG  444

seq1  CAGATATTAGGAAGATCCTGATGGGTTATTGTGATTATGATTATTGCTAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATATTAGGAAGATCCTGATGGGTTATTGTGATTATGATTATTGCTAT  494

seq1  TTACTGGAATAAAGGAAGAGTGAAGCTTCCTGGGCCCTGGTACTTGCAGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGGAATAAAGGAAGAGTGAAGCTTCCTGGGCCCTGGTACTTGCAGA  544

seq1  GCTCTTTTGCAGCAGAGATAATCAATGACTTACTAACAGGACCCTGATTA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTTTGCAGCAGAGATAATCAATGACTTACTAACAGGACCCTGATTA  594

seq1  GAAAAGTTAGAGACACAGAGTTTATCAACAAGACCAGGCTAGACCCTGCA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGTTAGAGACACAGAGTTTATCAACAAGACCAGGCTAGACCCTGCA  644

seq1  TAGTGATTGATAAACCTCGGCTCATGTGACCCTGGGAATTCATCTGAGGT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGATTGATAAACCTCGGCTCATGTGACCCTGGGAATTCATCTGAGGT  694

seq1  GGACATTCTACAGCCCTGTCTCCTGTGACCTCGTCTATCTAAGTTAGCTT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATTCTACAGCCCTGTCTCCTGTGACCTCGTCTATCTAAGTTAGCTT  744

seq1  CACTCTTCTGCCCACTAGCTCTCCTTCCTTCCAGTCCCTTCCTCTCACTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTTCTGCCCACTAGCTCTCCTTCCTTCCAGTCCCTTCCTCTCACTT  794

seq1  CTGTGCTGATGATTAAAGACGCCAGACCCCCAACTATTTACCAAGAGCTC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCTGATGATTAAAGACGCCAGACCCCCAACTATTTACCAAGAGCTC  844

seq1  TGTAAGCTATCACAGCCCGAGCAGCTCAGGCCTCTTTAGATGAGGCATAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGCTATCACAGCCCGAGCAGCTCAGGCCTCTTTAGATGAGGCATAA  894

seq1  AACCTTGCAACCCCATTATACAAACCATAAGACTCAATTCACAGGAAAAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTGCAACCCCATTATACAAACCATAAGACTCAATTCACAGGAAAAA  944

seq1  TAACCTTTTTTGTTTGCCTATGCTCTTCCCATGATTAATAGACACCATTG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTTTTTTGTTTGCCTATGCTCTTCCCATGATTAATAGACACCATTG  994

seq1  TTTAGTCTGACCGCAGAGGCAGCGTTGAACAACAGGCTAACATTTTCACT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTCTGACCGCAGAGGCAGCGTTGAACAACAGGCTAACATTTTCACT  1044

seq1  CCTAGACAGATCAAGGAAAGAAAATACTCCCGACATTCAGTAGATCATTT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGACAGATCAAGGAAAGAAAATACTCCCGACATTCAGTAGATCATTT  1094

seq1  TTCTCAGAATTC  1109
      ||||||||||||
seq2  TTCTCAGAATTC  1106


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