BAC Information

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BAC

Clone NameB6Ng01-268P03
Chromosome2 (Build37)
Map Location 87,294,801 - 87,448,678
singlet/doubletdoublet
Overlap geneOlfr1126, Pramel7, Pramel6, LOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038, LOC668445, LOC668447, Olfr1129, Olfr1130
Upstream geneOlfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1, Olfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125
Downstream geneOlfr1131, Olfr1132, LOC100042076, Olfr1133, Olfr1134, Olfr1135, Olfr1136, Olfr1137, Olfr1138, GA_x5J8B7W3Y5M-1033291-1033773, Olfr1140, Olfr1141, Olfr152, Olfr1142-ps1, Olfr1143, GA_x5J8B7W3Y5M-1094074-1093275, Olfr1145, Olfr1146-ps1, Olfr1147-ps1, Olfr1148, Olfr1149-ps1, Olfr1150-ps1, Olfr1151, Olfr1152, Olfr1153, Olfr1154, Olfr1155, Olfr1156, Olfr1157, Olfr74, Olfr1158, Olfr1159-ps1, Olfr1160, Olfr1161, Olfr73, Olfr1162, Olfr1163, Olfr1164, Olfr1165, Olfr1166, Olfr1167, Olfr1168, Olfr1169-ps1, Olfr1170, Olfr1171-ps1, Olfr1172-ps1, Olfr1173, Olfr1174, Olfr1175, Olfr1176, Olfr1177, Olfr1178, Olfr1179, Olfr1180, Olfr1181, Olfr1182, Olfr1183, Olfr1184, Olfr1185-ps1, Olfr1186, Olfr1187-ps1, Olfr1188, LOC668528, Olfr1189, GA_x5J8B7W4NS2-37772-38277
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-268P03.bB6Ng01-268P03.g
ACCGA071674GA071675
length1,1941,124
definitionB6Ng01-268P03.b B6Ng01-268P03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(87,447,481 - 87,448,678)(87,294,801 - 87,295,927)
sequence
gaattcagacatatttgcatgtatagattgtttcaaaagagaatatattt
caggctattactcaaagcagcacaggcattatagaagcataaactgatta
tactcccatgagaagaacaaaagctgatgcttttcttcagtaactgtgtt
aagaatcaattcatcatttgttccagagctctaagcactacttgatacgt
aacaattttctcagtgcagcaatcacctccttgtttctaagactgtatat
cagaggatttaacatgggagtcacaatgctgtaaaacagagagaatagtt
tgtcagttcctggagaatgggtggactttggcctcaagtaggtaatagta
gctgatccaaaaaacaaaaacaccacaagcaagtgggaagaacatgttga
gaaggcttttgcccgtcctgtggctgttggcaacttcagaatggtggcaa
tgattttgccataagatgcaagaatcaacataaaagggactgcagcaaat
aatatagccactaaatagacagatagctcatttattgacgtgtctccgca
ggccagcttgagaatgggtggtatgtcacacaagaagtggttgatttggt
tagaattgcagaaatgtagagaaaatatctgacaggtttgtcctatctgg
actgggatgcctccaagccaggaggctgctgccagctgagtgcactttgt
tgggttcatgaccaaaggatagtgcagagggttacagatggccacatagc
ggtcataagacatcacagccagcaggaaacactcagtggctgccagcata
aggaagaaacacaactgggtggcacagctgaggacagaaatctttctctc
ttgagtagcaatgctaaacagaatcctagggagagtgactgaaacataac
agatttccagagaagaaaaatttgccaggaaaaaatacatgggcttctgt
agtgcaggatcaattctagttatcacaattatgaaactatttcaaccaat
atgatcaagtaattatggagaacatccaaacaaatccctgtaagttagga
aggtctgaaaatccagagggagaaactcttgttcaccagttgaaagcatt
atccctctgcctgaatttctggtgaatttcatctttgatgatttcatagg
aaatgacagatttcttggccatggatcaatttcatcggtgtata
gaattcatgtaaccatacaaaactttaaacatttatctcctctttttatg
aatttagtcagagaaatacaagccctgtgcaccctccatgttacacgcat
cagtcaagatcagagtaactggaggaaggccaatcattcactcaaagaag
atgacagataaaaaagcatgaagtacttgaataaaacaaaagtgcctgta
tttcaaaaaatgctagcggctttctttgttatagtattaattgtgttttc
taaatgttttccatagtcagaaacagtagcaatcagggtaaacatcttag
agacaccaagtttcataggcagaaaagctcaaggtatagttttctctcag
cttgcttgcctagtgtgtgacagtcctaggctggaattgccatgtcaaag
aaaaactatataagtcccatttgaatatatcagtatagttccaatatcgt
gttactctgtaacattaaatgctcaagtcgcagaatgtgaataaaactga
ggatggttttacaaatgaaaaattgagatatttcctccccaacctagaaa
acaaacaaacaaacaaacaaacaacaaacaaacaaatggaaagagcagac
tttgtacaaatataggaataaaattcaagctaatgctgatttccaattag
tagtttggaagtatgattagactttgatttagaaatctactacaccatca
cttttatatgggtacttttcaaacttctgggatgataattttgagggcaa
taattatctatgaaaattcaatatgtataacacttatgaatatgccatga
aataatttaaacaaatgattttctcttctatttcagtcaatgtctttata
acaagttctagatttaattaagtagatgaaaataaacttaattattctgt
tacttatatttaagaaaaaaaaaaaaaaacttgtagttcagcttttcccc
cctggggaaccatagcttagcaatgccaggattcatttggaattttctat
tctgcaatatatatatatgtgatatatatatataattttcctcaatataa
tataattatcatgaaatatccatattttactgaagtattttaatttacaa
ctagtacttgtaatctatttattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_87447481_87448678
seq2: B6Ng01-268P03.b_48_1241 (reverse)

seq1  TATACA-CGATGAAATGAATCCAATGACAAGAAAATTCTTGTCATTTTTC  49
      |||||| |||||||||  |||||  | |||||||  || ||||| ||| |
seq2  TATACACCGATGAAATTGATCCATGGCCAAGAAA--TC-TGTCA-TTTCC  46

seq1  TATG-AATCATCCAAAAGATGAAATTCA-CAGAAATCAGGGCAGA-GGAT  96
      |||| |||||||  |||||||||||||| |||||||   |||||| ||||
seq2  TATGAAATCATC--AAAGATGAAATTCACCAGAAATTCAGGCAGAGGGAT  94

seq1  AATGC-TTCCACT-GTGA--CAGAGTTTCTCCTCCTGGGATTTTCAGACC  142
      ||||| ||| ||| ||||   |||||||||||  || |||||||||||||
seq2  AATGCTTTCAACTGGTGAACAAGAGTTTCTCCCTCT-GGATTTTCAGACC  143

seq1  TTCCTAACTTACAAGGGATTTTGTTTGGGATGTTCTCCATAATTTACTTG  192
      |||||||||||| ||||| ||||||| ||||||||||||||| |||||||
seq2  TTCCTAACTTAC-AGGGA-TTTGTTT-GGATGTTCTCCATAA-TTACTTG  189

seq1  ATCATATTGGTTGGAAATAGTTTCATAATTGTGATAACTAGAATTGATCC  242
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ATCATATTGGTT-GAAATAGTTTCATAATTGTGATAACTAGAATTGATCC  238

seq1  TGCACTACAGAAGCCCATGTATTTTTTCCTGGCAAATTTTTCTTCTCTGG  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTACAGAAGCCCATGTATTTTTTCCTGGCAAATTTTTCTTCTCTGG  288

seq1  AAATCTGTTATGTTTCAGTCACTCTCCCTAGGATTCTGTTTAGCATTGCT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTGTTATGTTTCAGTCACTCTCCCTAGGATTCTGTTTAGCATTGCT  338

seq1  ACTCAAGAGAGAAAGATTTCTGTCCTCAGCTGTGCCACCCAGTTGTGTTT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAGAGAGAAAGATTTCTGTCCTCAGCTGTGCCACCCAGTTGTGTTT  388

seq1  CTTCCTTATGCTGGCAGCCACTGAGTGTTTCCTGCTGGCTGTGATGTCTT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTATGCTGGCAGCCACTGAGTGTTTCCTGCTGGCTGTGATGTCTT  438

seq1  ATGACCGCTATGTGGCCATCTGTAACCCTCTGCACTATCCTTTGGTCATG  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCGCTATGTGGCCATCTGTAACCCTCTGCACTATCCTTTGGTCATG  488

seq1  AACCCAACAAAGTGCACTCAGCTGGCAGCAGCCTCCTGGCTTGGAGGCAT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAACAAAGTGCACTCAGCTGGCAGCAGCCTCCTGGCTTGGAGGCAT  538

seq1  CCCAGTCCAGATAGGACAAACCTGTCAGATATTTTCTCTACATTTCTGCA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTCCAGATAGGACAAACCTGTCAGATATTTTCTCTACATTTCTGCA  588

seq1  ATTCTAACCAAATCAACCACTTCTTGTGTGACATACCACCCATTCTCAAG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAACCAAATCAACCACTTCTTGTGTGACATACCACCCATTCTCAAG  638

seq1  CTGGCCTGCGGAGACACGTCAATAAATGAGCTATCTGTCTATTTAGTGGC  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTGCGGAGACACGTCAATAAATGAGCTATCTGTCTATTTAGTGGC  688

seq1  TATATTATTTGCTGCAGTCCCTTTTATGTTGATTCTTGCATCTTATGGCA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTATTTGCTGCAGTCCCTTTTATGTTGATTCTTGCATCTTATGGCA  738

seq1  AAATCATTGCCACCATTCTGAAGTTGCCAACAGCCACAGGACGGGCAAAA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATTGCCACCATTCTGAAGTTGCCAACAGCCACAGGACGGGCAAAA  788

seq1  GCCTTCTCAACATGTTCTTCCCACTTGCTTGTGGTGTTTTTGTTTTTTGG  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCTCAACATGTTCTTCCCACTTGCTTGTGGTGTTTTTGTTTTTTGG  838

seq1  ATCAGCTACTATTACCTACTTGAGGCCAAAGTCCACCCATTCTCCAGGAA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCTACTATTACCTACTTGAGGCCAAAGTCCACCCATTCTCCAGGAA  888

seq1  CTGACAAACTATTCTCTCTGTTTTACAGCATTGTGACTCCCATGTTAAAT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAAACTATTCTCTCTGTTTTACAGCATTGTGACTCCCATGTTAAAT  938

seq1  CCTCTGATATACAGTCTTAGAAACAAGGAGGTGATTGCTGCACTGAGAAA  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGATATACAGTCTTAGAAACAAGGAGGTGATTGCTGCACTGAGAAA  988

seq1  ATTGTTACGTATCAAGTAGTGCTTAGAGCTCTGGAACAAATGATGAATTG  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTACGTATCAAGTAGTGCTTAGAGCTCTGGAACAAATGATGAATTG  1038

seq1  ATTCTTAACACAGTTACTGAAGAAAAGCATCAGCTTTTGTTCTTCTCATG  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTAACACAGTTACTGAAGAAAAGCATCAGCTTTTGTTCTTCTCATG  1088

seq1  GGAGTATAATCAGTTTATGCTTCTATAATGCCTGTGCTGCTTTGAGTAAT  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTATAATCAGTTTATGCTTCTATAATGCCTGTGCTGCTTTGAGTAAT  1138

seq1  AGCCTGAAATATATTCTCTTTTGAAACAATCTATACATGCAAATATGTCT  1192
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGAAATATATTCTCTTTTGAAACAATCTATACATGCAAATATGTCT  1188

seq1  GAATTC  1198
      ||||||
seq2  GAATTC  1194

seq1: chr2_87294801_87295927
seq2: B6Ng01-268P03.g_65_1188

seq1  GAATTCATGTAACCATACAAAACTTTAAACATTTATCTCCTCTTTTTATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTAACCATACAAAACTTTAAACATTTATCTCCTCTTTTTATG  50

seq1  AATTTAGTCAGAGAAATACAAGCCCTGTGCACCCTCCATGTTACACGCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAGTCAGAGAAATACAAGCCCTGTGCACCCTCCATGTTACACGCAT  100

seq1  CAGTCAAGATCAGAGTAACTGGAGGAAGGCCAATCATTCACTCAAAGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCAAGATCAGAGTAACTGGAGGAAGGCCAATCATTCACTCAAAGAAG  150

seq1  ATGACAGATAAAAAAGCATGAAGTACTTGAATAAAACAAAAGTGCCTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAGATAAAAAAGCATGAAGTACTTGAATAAAACAAAAGTGCCTGTA  200

seq1  TTTCAAAAAATGCTAGCGGCTTTCTTTGTTATAGTATTAATTGTGTTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAAAATGCTAGCGGCTTTCTTTGTTATAGTATTAATTGTGTTTTC  250

seq1  TAAATGTTTTCCATAGTCAGAAACAGTAGCAATCAGGGTAAACATCTTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTTTTCCATAGTCAGAAACAGTAGCAATCAGGGTAAACATCTTAG  300

seq1  AGACACCAAGTTTCATAGGCAGAAAAGCTCAAGGTATAGTTTTCTCTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACCAAGTTTCATAGGCAGAAAAGCTCAAGGTATAGTTTTCTCTCAG  350

seq1  CTTGCTTGCCTAGTGTGTGACAGTCCTAGGCTGGAATTGCCATGTCAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTTGCCTAGTGTGTGACAGTCCTAGGCTGGAATTGCCATGTCAAAG  400

seq1  AAAAACTATATAAGTCCCATTTGAATATATCAGTATAGTTCCAATATCGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTATATAAGTCCCATTTGAATATATCAGTATAGTTCCAATATCGT  450

seq1  GTTACTCTGTAACATTAAATGCTCAAGTCGCAGAATGTGAATAAAACTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTCTGTAACATTAAATGCTCAAGTCGCAGAATGTGAATAAAACTGA  500

seq1  GGATGGTTTTACAAATGAAAAATTGAGATATTTCCTCCCCAACCTAGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGTTTTACAAATGAAAAATTGAGATATTTCCTCCCCAACCTAGAAA  550

seq1  ACAAACAAACAAACAAACAAACAACAAACAAACAAATGGAAAGAGCAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAACAAACAAACAAACAACAAACAAACAAATGGAAAGAGCAGAC  600

seq1  TTTGTACAAATATAGGAATAAAATTCAAGCTAATGCTGATTTCCAATTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTACAAATATAGGAATAAAATTCAAGCTAATGCTGATTTCCAATTAG  650

seq1  TAGTTTGGAAGTATGATTAGACTTTGATTTAGAAATCTACTACACCATCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTGGAAGTATGATTAGACTTTGATTTAGAAATCTACTACACCATCA  700

seq1  CTTTTATATGGGTACTTTTCAAACTTCTGGGATGATAATTTTGAGGGCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTATATGGGTACTTTTCAAACTTCTGGGATGATAATTTTGAGGGCAA  750

seq1  TAATTATCTATGAAAATTCAATATGTATAACACTTATGAATATGCCATGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATCTATGAAAATTCAATATGTATAACACTTATGAATATGCCATGA  800

seq1  AATAATTTAAACAAATGATTTTCTCTTCTATTTCAGTCAATGTCTTTATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTTAAACAAATGATTTTCTCTTCTATTTCAGTCAATGTCTTTATA  850

seq1  ACAAGTTCTAGATTTAATTAAGTAGATGAAAATAAACTTAATTATTCTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTTCTAGATTTAATTAAGTAGATGAAAATAAACTTAATTATTCTGT  900

seq1  TACTTATATTTAAG-AAAAAAAAAAAAAACTTGTAGTTCAGCTTTTCCCC  949
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TACTTATATTTAAGAAAAAAAAAAAAAAACTTGTAGTTCAGCTTTTCCCC  950

seq1  CCT-GGGAACCATAGCTTAGCAATGCCAGGATTCATTTGGAATTTTCTAT  998
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGGAACCATAGCTTAGCAATGCCAGGATTCATTTGGAATTTTCTAT  1000

seq1  TCTGC-ATATATATATATGTGATATATATATATAATTTT-CTCAATATAA  1046
      ||||| ||||||||||||||||||||||||||||||||| ||||||||||
seq2  TCTGCAATATATATATATGTGATATATATATATAATTTTCCTCAATATAA  1050

seq1  TATTAAATTATCATTGAAATATCCATATTTTACTGAAAGTATTTTATATT  1096
      |||  |||||||| ||||||||||||||||||||| ||||||||  || |
seq2  TAT--AATTATCA-TGAAATATCCATATTTTACTG-AAGTATTT--TAAT  1094

seq1  TTACAAACTAGTACTAATTAATCTA-TTATTT  1127
      |||| ||||||||||   ||||||| ||||||
seq2  TTAC-AACTAGTACT-TGTAATCTATTTATTT  1124