BAC Information

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BAC

Clone NameB6Ng01-268P21
Chromosome2 (Build37)
Map Location 70,552,902 - 70,662,548
singlet/doubletdoublet
Overlap geneTlk1
Upstream genePpig, 4930578N16Rik, Phospho2, LOC433432, Klhl23, Ssb, Mettl5, 4930550G17Rik, Zfp650, Myo3b, LOC100040021, Sp5, 4933404M02Rik, LOC100040068, Gad1, LOC100039766, Gorasp2
Downstream geneMettl8, 4833418A01Rik, Cybrd1, Dync1i2, Slc25a12, LOC667528, Hat1, LOC100040177, Metapl1, LOC100040207, Dlx1, Dlx1as, Dlx2, Gm1631, Itga6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-268P21.bB6Ng01-268P21.g
ACCGA071709GA071710
length1,1321,057
definitionB6Ng01-268P21.b B6Ng01-268P21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,552,902 - 70,554,038)(70,661,483 - 70,662,548)
sequence
gaattctaggccagccagggctatataataagatcttgtttcaaaaacca
acaaacaacaaaaccccaaaaacccaaccctaagtcaaataccattatgt
taaagaaatatataaatacataatatacatattgtcaatttattgctaaa
ttattatagcctctaagaactgtgcctcacacctaaaatactagccctgt
ggagcctggaatggagggttattgtgagagagacagcctatattaaatat
ttaaggctggcttgaactagagtgagacctgagctcaaaaaacaaaacta
aagcagtcacagtgacacacggcactcccgcactcgggagatgttggtag
tcagttctctgagtttgaagccagtctgttctacacaaagaaaccttgcc
ttgaaaaaaccaaaataaaagaaacaaaaacaaaaaaaaaaaactaaaaa
acacaatacaaaaccaatccaatgaagattcatggataatttccaaaaag
agttcacaaagccagcattaactatgaaggaagctctgactgcaatcacc
tgtagttgttgctgctgctgttattattattattagagacagaatctcaa
tatgtaggatggactgtaacctgcaatgtagatcacgctggtctcaaatt
cacagagatctatctgcccctgcctcttaaaatattgggattaaaggtca
atttttcttatggcctagagtacttacataagaaaacagcaattctgtgg
ttttgtcttagggatctgatgttattttcagtaggatcctaacagggaat
tgcacacatgaaggcatgggcaccggaagcacagcacagtcaaggtcagg
aaaggcttgctctgcgggggctctaggtctctctactttaccaagaacat
tacacatgcagattagaaacaggtttccagaaaggactcttatggactaa
cctctgacccagtgcacccagcacagagaacaaggtgtgctgtcagcagg
agactgctgtgttagcacagactctaagcagtgtttttttctatgctgtg
tgtttctcgccttacaaaggtagaattaacacacagtgtatattataaaa
agcactaataggaatgagagctatatattaca
ggagaacactcctttaccagggaagaataaatttgcatcggatctctttt
aacgcccttttgtctggaaaatgcgaagtcgtattcgttagcaatcggta
aatgggctgttcgctcccggttgtctcgcacaaggagattatcagcacct
ttaaaaaaaagaagaaaacgtttgaaagtccagcagtctagtaagccttg
taaagaaattcagagcttcggtttatgagtcgttcggattattgtatttt
gaaaatatgtctatatttattatccatagctttggtaattgctaatcaaa
tgtttcttgcccggatccagtggttgaggcatagcattctttgtcatttt
gttcccgtgagcatgtgtgaaagtgacaataggctcaaagattgacgtga
atatgctctagaaaattcatgggaagatttgatttatggcatccattaaa
catgccgaatacgttgacagacattttcccctttcatctcaccctgacac
tgatttttcattaaaagaaataagagcttatttattgaatgacttaaatt
aataatctgagtttttccttctgttcttgaaagtttatgtacatgtataa
gcttgaaaatttgtaagtttaaaatttaaagtgtgtgttgtaaatagggc
agttggtgcttgtagcttgcttgtttccactttgtagtttcattacgatg
tctaatggtagtatgagttttgaaagattatcgtggtttctagagtacta
tacctttgaaaaataattcctcattgatttctcaagtgtttattgagcca
ttactatgagccaggacccgtatgtgataatctgctgaatacatggtgtt
ggtttaacagttgacttctgttatcagtcctgggaatttggcaggcacca
aattcagatggagtttctaaggaagtcagccctagctgaccgtcttagtg
tgccgttctgcacccttcctgatgatgaaatgttctgaatgatggatact
taattcaaactttccaaataccagaatctgctccctcctcagcagctttt
ttgtttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_70552902_70554038
seq2: B6Ng01-268P21.b_48_1179

seq1  GAATTCTAGGCCAGCCAGGGCTATATAATAAGATCTTGTTTCAAAAACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGCCAGCCAGGGCTATATAATAAGATCTTGTTTCAAAAACCA  50

seq1  ACAAACAACAAAACCCCAAAAACCCAACCCTAAGTCAAATACCATTATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAACAAAACCCCAAAAACCCAACCCTAAGTCAAATACCATTATGT  100

seq1  TAAAGAAATATATAAATACATAATATACATATTGTCAATTTATTGCTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAATATATAAATACATAATATACATATTGTCAATTTATTGCTAAA  150

seq1  TTATTATAGCCTCTAAGAACTGTGCCTCACACCTAAAATACTAGCCCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATAGCCTCTAAGAACTGTGCCTCACACCTAAAATACTAGCCCTGT  200

seq1  GGAGCCTGGAATGGAGGGTTATTGTGAGAGAGACAGCCTATATTAAATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCTGGAATGGAGGGTTATTGTGAGAGAGACAGCCTATATTAAATAT  250

seq1  TTAAGGCTGGCTTGAACTAGAGTGAGACCTGAGCTCAAAAAACAAAACTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGCTGGCTTGAACTAGAGTGAGACCTGAGCTCAAAAAACAAAACTA  300

seq1  AAGCAGTCACAGTGACACACGGCACTCCCGCACTCGGGAGATGTTGGTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGTCACAGTGACACACGGCACTCCCGCACTCGGGAGATGTTGGTAG  350

seq1  TCAGTTCTCTGAGTTTGAAGCCAGTCTGTTCTACACAAAGAAACCTTGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTCTCTGAGTTTGAAGCCAGTCTGTTCTACACAAAGAAACCTTGCC  400

seq1  TTGAAAAAACCAAAATAAAAGAAACAAAAACAAAAAAAAAAAACTAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAAAACCAAAATAAAAGAAACAAAAACAAAAAAAAAAAACTAAAAA  450

seq1  ACACAATACAAAACCAATCCAATGAAGATTCATGGATAATTTCCAAAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAATACAAAACCAATCCAATGAAGATTCATGGATAATTTCCAAAAAG  500

seq1  AGTTCACAAAGCCAGCATTAACTATGAAGGAAGCTCTGACTGCAATCACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCACAAAGCCAGCATTAACTATGAAGGAAGCTCTGACTGCAATCACC  550

seq1  TGTAGTTGTTGCTGCTGCTGTTATTATTATTATTAGAGACAGAATCTCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTTGTTGCTGCTGCTGTTATTATTATTATTAGAGACAGAATCTCAA  600

seq1  TATGTAGGATGGACTGTAACCTGCAATGTAGATCACGCTGGTCTCAAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAGGATGGACTGTAACCTGCAATGTAGATCACGCTGGTCTCAAATT  650

seq1  CACAGAGATCTATCTGCCCCTGCCTCTTAAAATATTGGGATTAAAGGTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAGATCTATCTGCCCCTGCCTCTTAAAATATTGGGATTAAAGGTCA  700

seq1  ATTTTTCTTATGGCCTAGAGTACTTACATAAGAAAACAGCAATTCTGTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCTTATGGCCTAGAGTACTTACATAAGAAAACAGCAATTCTGTGG  750

seq1  TTTTGTCTTAGGGATCTGATGTTATTTTCAGTAGGATCCTAACAGGGAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCTTAGGGATCTGATGTTATTTTCAGTAGGATCCTAACAGGGAAT  800

seq1  TGCACACATGAAGGCATGGGCACCGGAAGCACAGCACAGTCAAGGTCAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACACATGAAGGCATGGGCACCGGAAGCACAGCACAGTCAAGGTCAGG  850

seq1  AAAGGCTTGCTCTGCGGGGGCTCTAGGTCTCTCTACTTTACCAAGAACAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCTTGCTCTGCGGGGGCTCTAGGTCTCTCTACTTTACCAAGAACAT  900

seq1  TACACATGCAGATTAGAAACAGGTTTCCAGAAAGGACTCTTATGGACTAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACATGCAGATTAGAAACAGGTTTCCAGAAAGGACTCTTATGGACTAA  950

seq1  CCTCTGACCCAGTGCACCCCAGCACAGAGAACAAGGTGTGCTGTCAGCAG  1000
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CCTCTGACCCAGTGCA-CCCAGCACAGAGAACAAGGTGTGCTGTCAGCAG  999

seq1  GAGACTGCTGTGTTTGGCACAAGACTCTAAGCAAGGTGTTTTTTCTATGC  1050
      |||||||||||| || |||| ||||||||||||  || ||||||||||||
seq2  GAGACTGCTGTG-TTAGCAC-AGACTCTAAGCAGTGT-TTTTTTCTATGC  1046

seq1  TGTGGTTGTTTTCTCGCTTTACAAAAGTTAAGAA-TAACACACAGTGTAT  1099
      ||||  || |||||||| ||||||| ||  |||| |||||||||||||||
seq2  TGTG--TG-TTTCTCGCCTTACAAAGGT--AGAATTAACACACAGTGTAT  1091

seq1  A-TATAAAAAGCACT-ATAGAAATGAGAGCTAT-TATTACA  1137
      | ||||||||||||| |||| |||||||||||| |||||||
seq2  ATTATAAAAAGCACTAATAGGAATGAGAGCTATATATTACA  1132

seq1: chr2_70661483_70662548
seq2: B6Ng01-268P21.g_71_1127 (reverse)

seq1  AAAAAAAAAAAGCTGCTGAGGGAGGGGAGCAGGATTTCTGGTTATTTGG-  49
      |||| ||||||||||||||||   ||||||||   |||||| ||||||| 
seq2  AAAACAAAAAAGCTGCTGAGG--AGGGAGCAG--ATTCTGG-TATTTGGA  45

seq1  AAGTTTGAATTAAGTTATTCCAACCATTCAGAACATTTCATCATCAGGAA  99
      |||||||||||||| |||  | | ||||||||||||||||||||||||||
seq2  AAGTTTGAATTAAG-TAT--CCATCATTCAGAACATTTCATCATCAGGAA  92

seq1  GGGTGCAGAACGGCACACCTAAGACGGTCAGCTAGGGCTGACCTTCCTTA  149
      ||||||||||||||||| ||||||||||||||||||||||| ||||||||
seq2  GGGTGCAGAACGGCACA-CTAAGACGGTCAGCTAGGGCTGA-CTTCCTTA  140

seq1  GAAACTCCATCTGAATTTGGTGCCTGCCAAATTCCCAGGACTGATAACAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTCCATCTGAATTTGGTGCCTGCCAAATTCCCAGGACTGATAACAG  190

seq1  AAGTCAACTGTTAAACCAACACCATGTATTCAGCAGATTATCACATACGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAACTGTTAAACCAACACCATGTATTCAGCAGATTATCACATACGG  240

seq1  GTCCTGGCTCATAGTAATGGCTCAATAAACACTTGAGAAATCAATGAGGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGGCTCATAGTAATGGCTCAATAAACACTTGAGAAATCAATGAGGA  290

seq1  ATTATTTTTCAAAGGTATAGTACTCTAGAAACCACGATAATCTTTCAAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTTTCAAAGGTATAGTACTCTAGAAACCACGATAATCTTTCAAAA  340

seq1  CTCATACTACCATTAGACATCGTAATGAAACTACAAAGTGGAAACAAGCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATACTACCATTAGACATCGTAATGAAACTACAAAGTGGAAACAAGCA  390

seq1  AGCTACAAGCACCAACTGCCCTATTTACAACACACACTTTAAATTTTAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACAAGCACCAACTGCCCTATTTACAACACACACTTTAAATTTTAAA  440

seq1  CTTACAAATTTTCAAGCTTATACATGTACATAAACTTTCAAGAACAGAAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAAATTTTCAAGCTTATACATGTACATAAACTTTCAAGAACAGAAG  490

seq1  GAAAAACTCAGATTATTAATTTAAGTCATTCAATAAATAAGCTCTTATTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAACTCAGATTATTAATTTAAGTCATTCAATAAATAAGCTCTTATTT  540

seq1  CTTTTAATGAAAAATCAGTGTCAGGGTGAGATGAAAGGGGAAAATGTCTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAATGAAAAATCAGTGTCAGGGTGAGATGAAAGGGGAAAATGTCTG  590

seq1  TCAACGTATTCGGCATGTTTAATGGATGCCATAAATCAAATCTTCCCATG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACGTATTCGGCATGTTTAATGGATGCCATAAATCAAATCTTCCCATG  640

seq1  AATTTTCTAGAGCATATTCACGTCAATCTTTGAGCCTATTGTCACTTTCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCTAGAGCATATTCACGTCAATCTTTGAGCCTATTGTCACTTTCA  690

seq1  CACATGCTCACGGGAACAAAATGACAAAGAATGCTATGCCTCAACCACTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGCTCACGGGAACAAAATGACAAAGAATGCTATGCCTCAACCACTG  740

seq1  GATCCGGGCAAGAAACATTTGATTAGCAATTACCAAAGCTATGGATAATA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCGGGCAAGAAACATTTGATTAGCAATTACCAAAGCTATGGATAATA  790

seq1  AATATAGACATATTTTCAAAATACAATAATCCGAACGACTCATAAACCGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAGACATATTTTCAAAATACAATAATCCGAACGACTCATAAACCGA  840

seq1  AGCTCTGAATTTCTTTACAAGGCTTACTAGACTGCTGGACTTTCAAACGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTGAATTTCTTTACAAGGCTTACTAGACTGCTGGACTTTCAAACGT  890

seq1  TTTCTTCTTTTTTTTAAAGGTGCTGATAATCTCCTTGTGCGAGACAACCG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCTTTTTTTTAAAGGTGCTGATAATCTCCTTGTGCGAGACAACCG  940

seq1  GGAGCGAACAGCCCATTTACCGATTGCTAACGAATACGACTTCGCATTTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCGAACAGCCCATTTACCGATTGCTAACGAATACGACTTCGCATTTT  990

seq1  CCAGACAAAAGGGCGTTAAAAGAGATCCGATGCAAATTTATTCTTCCCTG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACAAAAGGGCGTTAAAAGAGATCCGATGCAAATTTATTCTTCCCTG  1040

seq1  GTAAAGGAGTGTTCTCC  1066
      |||||||||||||||||
seq2  GTAAAGGAGTGTTCTCC  1057