BAC Information

Click to search

BAC

Clone NameB6Ng01-269D18
Chromosome2 (Build37)
Map Location 76,395,057 - 76,396,213
singlet/doubletsinglet
Overlap geneOsbpl6
Upstream geneLOC667828, Hnrpa3, Nfe2l2, E030042O20Rik, LOC623453, Agps, Ttc30b, Ttc30a2, Ttc30a1, Pde11a, Cyct, Drbp1
Downstream genePrkra, Dfnb59, Fkbp7, Plekha3, Ttn, 2610301F02Rik, Sestd1, LOC623706, LOC667906, Zfp533
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-269D18.bB6Ng01-269D18.g
ACCGA071887GA071888
length9421,164
definitionB6Ng01-269D18.b B6Ng01-269D18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagtcctgactttctttggtgatgcacagcaatgtggaactgta
atctgaataaaccctttcctccccaacttgcttcttggtcaggatgtttt
gtgcaggaatagaatccctgactaagacaagttggtaccagggactgggg
tattgctgggataggcctgaccatgcatttgtttggaggaatgtggatca
ggggactttggaaaggggtgaattgctttaagttgagctatcctagtggg
aaaatggaagactttgctgctgagttgatttgaactatgcagacctggcc
caagaggtttcagtagagaagaattttagaatgtggcctagagactgttt
ttatggtattttgttgaggaatgtggctgctttttgcccttgtctgaaga
gtctgcctgaagctaaggtgaggagactcagattaatttgcattgacaaa
ggaagcctcagaaatgcccatccatagactttgttttttggttaagtgtc
atgaagaggactttaaacaagcatagcaagcttagaaaggaaaaatagaa
aatatatggtttgagtattaaaggggcagcaggaagtgaaatggagccga
atcctgtgtttaaggagataaatttagggagtggaactttgggccaagat
cccactcagctaaatttagatacaggcacggtggtacacacctttaatcc
ctggagataaaatcacagatctctgagttcaaggccagcctgggacagag
caagttctaggtgaagaaaagcttaaatccaggtgtggtggtacacacct
ttaatcccagcattgctaaagaataaggggggaggggtgttccagctccc
agcaagcagcagaactcagcagtttaagccatttggctctgactttagag
tcaagagggactattggaacaattggtgctggtagctgagct
gaattctcataaccaaacagctttgaacatgggaaggaaagacagctagg
gtgagaagtctatagtctactctggtaaaaattaatgttctgcctttctg
taggcaagagactgctgagtatggacatctctgctgcttagagacattgc
tagatgagcttactcatccccactaggtatgcatgttgaaggaggtccag
ccctgttctagtcagagagacccctgacaactcctggaagacctgctgcc
ttcagcaaacagaaaatgttcaaggggaatgagcaatttctgcagcactc
cagccaacaacatacactttaagtgcaagtggaagtagatgctctctggg
agtgattaatggattatccaaagtctacatttctacggaaaactgcatct
gctcctcttgaaaatgtaaagtgactgcagggatgaggtaatctctgatt
cctcatctaagtaagaatcacgaggtcgcttgtgtcactccttggtccaa
caaagcaagacaacaatgagaaatgcaaagaagccaatcaaagatctgcc
tgctctggcaccaatgacttctgatgactcaaaacaattcttgtgatttc
tctgcacatttattaagcagagttgcactgtgtttcctaaaggggaaaga
tggaccatgtgggcttgtggtaagagtcctggctccacagacagccaagg
gtattgtgttccgacttgctaagagccagtcagtccactcacaatggcta
tggaaggaatctgttcagaggcatgcattaaataacccgattgaaacagt
atctatcataagagggtatgttcttagggtgctaacattccccagctctt
ttatttaaagaaaagtttcttctggttgcaaaaatgattctactctctta
gtcatgagaacatgaatacaaagcctgaaaataagacaaattgtaagctc
aaaacaaacgaccatcttgtgagttttcttgtagaatcatttggcatatt
ttcccccatagcactaattttatgaacacaatgagaaacacacaaaagta
cattgctcaaggaacacatgtatacattcacagaatgcagaatttctaaa
tagaaaaccactgttgtttaggtgccttatggaaaactaacatggattta
caccagaatttagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_76395057_76396213
seq2: B6Ng01-269D18.g_64_1227 (reverse)

seq1  CCTAA--TCTGGTGT-AATTCATGGTAATTTTTCATAA-GCA-CTAAAC-  44
      |||||  |||||||| ||| |||| || |||| ||||| ||| |||||| 
seq2  CCTAAATTCTGGTGTAAATCCATGTTAGTTTTCCATAAGGCACCTAAACA  50

seq1  ACAGTG--TTTCTATTTAGAATATCTGCATTCTGTGAATGTAATTACATG  92
      ||||||  |||||||||||||  |||||||||||||||||||  ||||||
seq2  ACAGTGGTTTTCTATTTAGAAATTCTGCATTCTGTGAATGTA--TACATG  98

seq1  TGTTCCTTTGAGCAATGTACTTTTGTGTGTTTCTCATTGTGTTCATAAAA  142
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCC-TTGAGCAATGTACTTTTGTGTGTTTCTCATTGTGTTCATAAAA  147

seq1  TTAGTGCTATGGGGG-AAATATGCCAAATGATTCTACAAG-AAACTCACA  190
      ||||||||||||||| |||||||||||||||||||||||| |||||||||
seq2  TTAGTGCTATGGGGGAAAATATGCCAAATGATTCTACAAGAAAACTCACA  197

seq1  AGATGGTCGTTTGTTTTGAGCTTACAATTTGTCTTATTTTCAGGCTTTGT  240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGTCGTTTGTTTTGAGCTTACAATTTGTCTTATTTTCAGGCTTTGT  247

seq1  ATTCATGTTCTCATGACTAAGAGAGTAGAATCATTTTTGCAACCAGAAGA  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATGTTCTCATGACTAAGAGAGTAGAATCATTTTTGCAACCAGAAGA  297

seq1  AACTTTTCTTTAAATAAAAGAGCTGGGGAATGTTAGCACCCTAAGAACAT  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTCTTTAAATAAAAGAGCTGGGGAATGTTAGCACCCTAAGAACAT  347

seq1  ACCCTCTTATGATAGATACTGTTTCAATCGGGTTATTTAATGCATGCCTC  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCTTATGATAGATACTGTTTCAATCGGGTTATTTAATGCATGCCTC  397

seq1  TGAACAGATTCCTTCCATAGCCATTGTGAGTGGACTGACTGGCTCTTAGC  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACAGATTCCTTCCATAGCCATTGTGAGTGGACTGACTGGCTCTTAGC  447

seq1  AAGTCGGAACACAATACCCTTGGCTGTCTGTGGAGCCAGGACTCTTACCA  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCGGAACACAATACCCTTGGCTGTCTGTGGAGCCAGGACTCTTACCA  497

seq1  CAAGCCCACATGGTCCATCTTTCCCCTTTAGGAAACACAGTGCAACTCTG  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCCACATGGTCCATCTTTCCCCTTTAGGAAACACAGTGCAACTCTG  547

seq1  CTTAATAAATGTGCAGAGAAATCACAAGAATTGTTTTGAGTCATCAGAAG  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATAAATGTGCAGAGAAATCACAAGAATTGTTTTGAGTCATCAGAAG  597

seq1  TCATTGGTGCCAGAGCAGGCAGATCTTTGATTGGCTTCTTTGCATTTCTC  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGGTGCCAGAGCAGGCAGATCTTTGATTGGCTTCTTTGCATTTCTC  647

seq1  ATTGTTGTCTTGCTTTGTTGGACCAAGGAGTGACACAAGCGACCTCGTGA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTGTCTTGCTTTGTTGGACCAAGGAGTGACACAAGCGACCTCGTGA  697

seq1  TTCTTACTTAGATGAGGAATCAGAGATTACCTCATCCCTGCAGTCACTTT  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTACTTAGATGAGGAATCAGAGATTACCTCATCCCTGCAGTCACTTT  747

seq1  ACATTTTCAAGAGGAGCAGATGCAGTTTTCCGTAGAAATGTAGACTTTGG  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTCAAGAGGAGCAGATGCAGTTTTCCGTAGAAATGTAGACTTTGG  797

seq1  ATAATCCATTAATCACTCCCAGAGAGCATCTACTTCCACTTGCACTTAAA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCCATTAATCACTCCCAGAGAGCATCTACTTCCACTTGCACTTAAA  847

seq1  GTGTATGTTGTTGGCTGGAGTGCTGCAGAAATTGCTCATTCCCCTTGAAC  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATGTTGTTGGCTGGAGTGCTGCAGAAATTGCTCATTCCCCTTGAAC  897

seq1  ATTTTCTGTTTGCTGAAGGCAGCAGGTCTTCCAGGAGTTGTCAGGGGTCT  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTGTTTGCTGAAGGCAGCAGGTCTTCCAGGAGTTGTCAGGGGTCT  947

seq1  CTCTGACTAGAACAGGGCTGGACCTCCTTCAACATGCATACCTAGTGGGG  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGACTAGAACAGGGCTGGACCTCCTTCAACATGCATACCTAGTGGGG  997

seq1  ATGAGTAAGCTCATCTAGCAATGTCTCTAAGCAGCAGAGATGTCCATACT  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTAAGCTCATCTAGCAATGTCTCTAAGCAGCAGAGATGTCCATACT  1047

seq1  CAGCAGTCTCTTGCCTACAGAAAGGCAGAACATTAATTTTTACCAGAGTA  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGTCTCTTGCCTACAGAAAGGCAGAACATTAATTTTTACCAGAGTA  1097

seq1  GACTATAGACTTCTCACCCTAGCTGTCTTTCCTTCCCATGTTCAAAGCTG  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTATAGACTTCTCACCCTAGCTGTCTTTCCTTCCCATGTTCAAAGCTG  1147

seq1  TTTGGTTATGAGAATTC  1157
      |||||||||||||||||
seq2  TTTGGTTATGAGAATTC  1164