BAC Information

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BAC

Clone NameB6Ng01-269O03
Chromosome2 (Build37)
Map Location 138,241,830 - 138,242,946
singlet/doubletsinglet
Overlap genenone
Upstream geneBtbd3
Downstream geneLOC628103
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-269O03.bB6Ng01-269O03.g
ACCGA072365GA072366
length1,2341,117
definitionB6Ng01-269O03.b B6Ng01-269O03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtactcactagccccctaggcaagctaggctctaaaaagacca
tggtgattggagccactggtagtaaattttacccctggacgaccgaacga
gccctacagataaacaagaacatagtgacccattccttcctggtgatacc
tgagtgtcctgctcccctcttggggcgcgatctgctaaccaaactaaagg
ctcaagtccaatttacttcagaaggcccacaagtaagctggggaaaagcc
cccgttgcctgccttgtcctcaacacagaggaagagtatcggttgcatga
agagcaacccaaaaatgcagtctcttcaggctggctaactgcgttcccca
atgtctgggcagaacaagcaggaatggggttggctaaacaagtgcctccg
gttgtggtagaacttaaagctgatgccacccccatctcggtaagacaata
ccccatgagcaaggaagctagggagggcatccggcctcatatccagaggt
tgctagaccaaggagttttagtggcctgtcagtccccctggaatacacca
cttctgccggttcgaaaaccagggactaatgactatcgcccggtgcaaga
cctccgggaagttaacaaaagggtcctggacattcaccccacagtcccga
acccatacaatttattaagctctctcccacccgagagaacatggtataca
gtcctggacttaaaagatgccttcttttgcctgtgcttgcaccccaagag
tcagctcctgtttgcctttgaatggagggacccagagggcggacagactg
gtcaactaacctggactaggctaccacaggggttcaaaaattcccccacc
ctgtttgacgaggccctccatcgggatctcgcgccttttcgcgctcgaaa
ccctcagcttaccctactacagtatgtggatgatctcttggtcgtggcgg
gcctcgaggagctgtgtcaccagggaactgagaggcctccttacagactg
agtgacttggggtatcgagttcggctaaaaaggcacaaatcttgttcaaa
ctgaggtaacctaccttggggtataccctccgagggggttaaagaaatgg
ctctcacagaagcctgggagaaagactgtttatgatgaattccctctgcc
caaccactcctcacggacaggtactgactctgggatctgctggccttgta
gaactctgtggcaattcaaggcatttgtgctaac

gaattcagttaatattacccaactaatcctgggacgggagcctaccctga
accgggtaggcccaggaagtgtcataccatcaaagaaaacggaagttccc
tctcctagcacctatcaaatggcaattgttcctcaaactggcggtgatat
ttaaagataccctcctcaccttcatgctgagatgttatgtggcttaggtt
tgtgcatgccaactgctgtgaatccatgtgtgtaactgccctaccgttga
tgattccataagccctcgggcctacgacttcccaaacttcagccagcgtg
cataaaatcatctgagaattttgagatatatacatgttggccttcatctc
ataagtcagtagttcaggtagagtacaagaaagtacatttcttacagtct
ttcggatggggctgctggtctgtggctgtactcacaatggtgtcactgtg
gaaatcagatgtttgcagttagttatataacaccaagtactaagtgaatt
ctttgaattcttctggaaggcttactggctagcctttagaggtctcaagc
ataggatgtactttatcattatcccccttcttatttccttcctgtgtcta
ctgtctatgcctcttttattctaggaacccaagcttgagatcttagggcc
cacttgcctgactgtctcatctttagtttttgctcccttgagtatcaggt
acagcacagctagctcatctttacaatgaccttttgactccccagtttgt
cacccacttgtgtggttctgggtgccttttccacacctaccttgtttatg
ctgtcttagccactcctatttctaaaatgcctctggtctatagttgcttt
ctcaacctgtaccatctgtgtccctttctacctctgactcagataaagtc
tcttagaggtcagagaggggtagagagctgggttacattatattaaagcc
tcctggccacctcagacttacagaggaaacttaaaataatcttagtcttc
cgatgggaaattcttagaataattggaggtaggcattaatcttgttttag
ctccattccttctgtttctgagactcaattccagccaacttaacctgaaa
gaaagtaaaccacattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_138241830_138242946
seq2: B6Ng01-269O03.g_68_1184

seq1  GAATTCAGTTAATATTACCCAACTAATCCTGGGACGGGAGCCTACCCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTAATATTACCCAACTAATCCTGGGACGGGAGCCTACCCTGA  50

seq1  ACCGGGTAGGCCCAGGAAGTGTCATACCATCAAAGAAAACGGAAGTTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGGGTAGGCCCAGGAAGTGTCATACCATCAAAGAAAACGGAAGTTCCC  100

seq1  TCTCCTAGCACCTATCAAATGGCAATTGTTCCTCAAACTGGCGGTGATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTAGCACCTATCAAATGGCAATTGTTCCTCAAACTGGCGGTGATAT  150

seq1  TTAAAGATACCCTCCTCACCTTCATGCTGAGATGTTATGTGGCTTAGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGATACCCTCCTCACCTTCATGCTGAGATGTTATGTGGCTTAGGTT  200

seq1  TGTGCATGCCAACTGCTGTGAATCCATGTGTGTAACTGCCCTACCGTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCATGCCAACTGCTGTGAATCCATGTGTGTAACTGCCCTACCGTTGA  250

seq1  TGATTCCATAAGCCCTCGGGCCTACGACTTCCCAAACTTCAGCCAGCGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCCATAAGCCCTCGGGCCTACGACTTCCCAAACTTCAGCCAGCGTG  300

seq1  CATAAAATCATCTGAGAATTTTGAGATATATACATGTTGGCCTTCATCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAATCATCTGAGAATTTTGAGATATATACATGTTGGCCTTCATCTC  350

seq1  ATAAGTCAGTAGTTCAGGTAGAGTACAAGAAAGTACATTTCTTACAGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTCAGTAGTTCAGGTAGAGTACAAGAAAGTACATTTCTTACAGTCT  400

seq1  TTCGGATGGGGCTGCTGGTCTGTGGCTGTACTCACAATGGTGTCACTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGGATGGGGCTGCTGGTCTGTGGCTGTACTCACAATGGTGTCACTGTG  450

seq1  GAAATCAGATGTTTGCAGTTAGTTATATAACACCAAGTACTAAGTGAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCAGATGTTTGCAGTTAGTTATATAACACCAAGTACTAAGTGAATT  500

seq1  CTTTGAATTCTTCTGGAAGGCTTACTGGCTAGCCTTTAGAGGTCTCAAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAATTCTTCTGGAAGGCTTACTGGCTAGCCTTTAGAGGTCTCAAGC  550

seq1  ATAGGATGTACTTTATCATTATCCCCCTTCTTATTTCCTTCCTGTGTCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGATGTACTTTATCATTATCCCCCTTCTTATTTCCTTCCTGTGTCTA  600

seq1  CTGTCTATGCCTCTTTTATTCTAGGAACCCAAGCTTGAGATCTTAGGGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTATGCCTCTTTTATTCTAGGAACCCAAGCTTGAGATCTTAGGGCC  650

seq1  CACTTGCCTGACTGTCTCATCTTTAGTTTTTGCTCCCTTGAGTATCAGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGCCTGACTGTCTCATCTTTAGTTTTTGCTCCCTTGAGTATCAGGT  700

seq1  ACAGCACAGCTAGCTCATCTTTACAATGACCTTTTGACTCCCCAGTTTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCACAGCTAGCTCATCTTTACAATGACCTTTTGACTCCCCAGTTTGT  750

seq1  CACCCACTTGTGTGGTTCTGGGTGCCTTTTCCACACCTACCTTGTTTATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCACTTGTGTGGTTCTGGGTGCCTTTTCCACACCTACCTTGTTTATG  800

seq1  CTGTCTTAGCCACTCCTATTTCTAAAATGCCTCTGGTCTATAGTTGCTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTAGCCACTCCTATTTCTAAAATGCCTCTGGTCTATAGTTGCTTT  850

seq1  CTCAACCTGTACCATCTGTGTCCCTTTCTACCTCTGACTCAGATAAAGTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACCTGTACCATCTGTGTCCCTTTCTACCTCTGACTCAGATAAAGTC  900

seq1  TCTTAGAGGTCAGAGAGGGGTAGAGAGCTGGGTTACATTATATTAAAGCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGAGGTCAGAGAGGGGTAGAGAGCTGGGTTACATTATATTAAAGCC  950

seq1  T-CTGGCCA-CTCAGACTTACAGAGGAAACTTAAAATAATC-TAGTCTTC  997
      | ||||||| ||||||||||||||||||||||||||||||| ||||||||
seq2  TCCTGGCCACCTCAGACTTACAGAGGAAACTTAAAATAATCTTAGTCTTC  1000

seq1  CGATGGGAAATTCTTAGGATAATTTGAGGTAGGCATTAATTCTTTTGTTT  1047
      ||||||||||||||||| |||||| ||||||||||||||   | ||||||
seq2  CGATGGGAAATTCTTAGAATAATTGGAGGTAGGCATTAA---TCTTGTTT  1047

seq1  TAGCTCCATTCC-TCTGTTTCTGAGACTCATTTCCAGCCAACCTTAACTG  1096
      |||||||||||| ||||||||||||||||| ||||||||||| | | |||
seq2  TAGCTCCATTCCTTCTGTTTCTGAGACTCAATTCCAGCCAACTTAACCTG  1097

seq1  AACAGAAGTAAAACCACATTC  1117
      || ||||   |||||||||||
seq2  AA-AGAAAGTAAACCACATTC  1117


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