BAC Information

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BAC

Clone NameB6Ng01-270I23
Chromosome2 (Build37)
Map Location 114,642,776 - 114,643,850
singlet/doubletsinglet
Overlap geneLOC100043222
Upstream geneScg5, Arhgap11a, LOC100043526, Gja9, A530058N18Rik, Actc1, Aqr, Zfp770, Atpbd4, LOC100043219
Downstream geneLOC100043232, LOC100043236, BC052040
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-270I23.bB6Ng01-270I23.g
ACCGA072869GA072870
length1,0631,172
definitionB6Ng01-270I23.b B6Ng01-270I23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgcagaatgcatgatttctctattatttcctggttttcacaac
cactaaaagctataaattttccttcttttcttgtgagagagaggtagaga
tggaaaaggcactgaacagtagtctagatttttcctgttttttttttttt
ccaaaatactgcaattgcttttcttactttctctttacaaagaaaaaaag
atgaagagcaaaatggaaattctaaaataaaactggaccaagtttaatgc
ttttaatgtgaagagctgcaatgttcataccttcagttgggccagtagga
tcttcattttagaatatccacgaggtactatgattcggttgaggatgccc
tctcattacaatggaactacaatgaaagtccagaaagaatcaatgagtcc
cctatgttccacagacttcacttgcctaaagaaagggctgtttcttcatt
tcatagaagacaataggaagcctgacacagtaaaaagaaaacaagttaaa
acatattctactgccaggtctggtggcacatgcctgtcatcccagtactt
cagattgggacattaaaactgtgattttgaagctagtccgggacacatag
taagttccaggctagcctgtgttatcaaatgttctttaaataggtcacac
aacaaaaattatcgtagataaattaagtaaagagaaactaattaaaggca
tttgagttgacttacaaatatgaaatcacataattggtcaaacattaaag
ataatctaagctacagcatacgattctgactcctattttctttatataac
acaattcttcatagccgaatattatggcacatgcctataattccagaaag
aatgtggcagaggcaggaggattataagtttaaagtcaaattgtgcttca
cagtcaaagtcaatggtgtctcaaaagagtgataaattatggcttacatc
tctattgccagaaaattttactgctcagtttcacaacatcctatcatagt
tatgttctcccaagaatgccatcatctctaaatgtcactcattttcttgt
ttagttcttctaa
gaattcacacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ctcagcatccttactcatcagagaaatgcaaatcaaaacaaccctgagat
tccatctcataccagtcagaatgcctaagatcaaaaattcatgtgacagc
agatgctggcaaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggtcatagtactcccggaggatcctgaaatacctctcttgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttacaatagccagaagctggaaaaaacccagat
gcccctcaacagaggaatggatacagaaaatgtggcacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atgtttggacctggagggtattgtcctgagtgaggtaacacaatcacaaa
agaactcaaatgatatgaactcactgataagtggatattagcccagaaac
ttagtatacctgagatataagatacaatttgtaaaacacatgaaactgaa
gaagaacgaagaccaaagtgtggacactttgccccttcttagaatgggaa
acaatcacccatggaaggagttacagagacaaagtttggagttgagaaaa
aaagaatggaccatctagagactgccatatccaggtatccatgccataat
tagcctccaaacgatgacaccattgcatacactagtaagattttgctgaa
aggaccctgatatagctgtctcttgtgagactatgccgtggccctagcaa
acacagaagtggatgctcacagtcagctcttagacggatcacagggcccc
aatggaggagctagagaaatatccagagctaagagatcttcaaccctgta
ggtgcaacaacattatgaactaaccagtaccccggagctctgacttctag
ctgtgtatgtctcaaaaagatgcccttagtcgccatcatttgaaagagag
ccattggaactgcactttaatgccaagatacaggcaaacgcctcaaggct
cataaaagagtgggcaaataga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_114642776_114643850
seq2: B6Ng01-270I23.b_43_1105

seq1  GAATTCCTGCAGAATGCATGATTTCTCTATTATTTCCTGGTTTTCACAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGCAGAATGCATGATTTCTCTATTATTTCCTGGTTTTCACAAC  50

seq1  CACTAAAAGCTATAAATTTTCCTTCTTTTCTTGTGAGAGAGAGGTAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAAAGCTATAAATTTTCCTTCTTTTCTTGTGAGAGAGAGGTAGAGA  100

seq1  TGGAAAAGGCACTGAACAGTAGTCTAGATTTTTCCTGTTTTTTTTTTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAAGGCACTGAACAGTAGTCTAGATTTTTCCTGTTTTTTTTTTTTT  150

seq1  CCAAAATACTGCAATTGCTTTTCTTACTTTCTCTTTACAAAGAAAAAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAATACTGCAATTGCTTTTCTTACTTTCTCTTTACAAAGAAAAAAAG  200

seq1  ATGAAGAGCAAAATGGAAATTCTAAAATAAAACTGGACCAAGTTTAATGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGAGCAAAATGGAAATTCTAAAATAAAACTGGACCAAGTTTAATGC  250

seq1  TTTTAATGTGAAGAGCTGCAATGTTCATACCTTCAGTTGGGCCAGTAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATGTGAAGAGCTGCAATGTTCATACCTTCAGTTGGGCCAGTAGGA  300

seq1  TCTTCATTTTAGAATATCCACGAGGTACTATGATTCGGTTGAGGATGCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATTTTAGAATATCCACGAGGTACTATGATTCGGTTGAGGATGCCC  350

seq1  TCTCATTACAATGGAACTACAATGAAAGTCCAGAAAGAATCAATGAGTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTACAATGGAACTACAATGAAAGTCCAGAAAGAATCAATGAGTCC  400

seq1  CCTATGTTCCACAGACTTCACTTGCCTAAAGAAAGGGCTGTTTCTTCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGTTCCACAGACTTCACTTGCCTAAAGAAAGGGCTGTTTCTTCATT  450

seq1  TCATAGAAGACAATAGGAAGCCTGACACAGTAAAAAGAAAACAAGTTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGAAGACAATAGGAAGCCTGACACAGTAAAAAGAAAACAAGTTAAA  500

seq1  ACATATTCTACTGCCAGGTCTGGTGGCACATGCCTGTCATCCCAGTACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTCTACTGCCAGGTCTGGTGGCACATGCCTGTCATCCCAGTACTT  550

seq1  CAGATTGGGACATTAAAACTGTGATTTTGAAGCTAGTCCGGGACACATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTGGGACATTAAAACTGTGATTTTGAAGCTAGTCCGGGACACATAG  600

seq1  TAAGTTCCAGGCTAGCCTGTGTTATCAAATGTTCTTTAAATAGGTCACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTCCAGGCTAGCCTGTGTTATCAAATGTTCTTTAAATAGGTCACAC  650

seq1  AACAAAAATTATCGTAGATAAATTAAGTAAAGAGAAACTAATTAAAGGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAATTATCGTAGATAAATTAAGTAAAGAGAAACTAATTAAAGGCA  700

seq1  TTTGAGTTGACTTACAAATATGAAATCACATAATTGGTCAAACATTAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGTTGACTTACAAATATGAAATCACATAATTGGTCAAACATTAAAG  750

seq1  ATAATCTAAGCTACAGCATACGATTCTGACTCCTATTTTCTTTATATAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCTAAGCTACAGCATACGATTCTGACTCCTATTTTCTTTATATAAC  800

seq1  ACAATTCTTCATAGCCGAATATTATGGCACATGCCTATAATTCCAGAAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTCTTCATAGCCGAATATTATGGCACATGCCTATAATTCCAGAAAG  850

seq1  AATGTGGCAGAGGCAGGAGGATTATAAGTTTAAAGTCAAATTGTGCTTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGGCAGAGGCAGGAGGATTATAAGTTTAAAGTCAAATTGTGCTTCA  900

seq1  CAGTCAAAGTCAATGGTGTCTCAAAAAGAGTGATAAATTATGGCTTACAA  950
      |||||||||||||||||||||| ||||||||||||||||||||||||| |
seq2  CAGTCAAAGTCAATGGTGTCTC-AAAAGAGTGATAAATTATGGCTTAC-A  948

seq1  TCTCTATTGCCAGAAAAATTTTACTGCTCAGTTTTCACAACATCCTAATC  1000
      ||||||||||||| ||||||||||||||||| |||||||||||||| |||
seq2  TCTCTATTGCCAG-AAAATTTTACTGCTCAG-TTTCACAACATCCT-ATC  995

seq1  ATTAGTTTATTGTTTCTTCCCAAGAATGCCATCATCTCTAAAATGTCACT  1050
      | |||||   ||||   |||||||||||||||||||||| ||||||||||
seq2  A-TAGTT--ATGTT--CTCCCAAGAATGCCATCATCTCT-AAATGTCACT  1039

seq1  CATTTTCTGGTTTAGTTTCTTCTAA  1075
      |||||||| |||||| |||||||||
seq2  CATTTTCTTGTTTAG-TTCTTCTAA  1063