BAC Information

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BAC

Clone NameB6Ng01-270M10
Chromosome2 (Build37)
Map Location 74,693,920 - 74,695,085
singlet/doubletsinglet
Overlap geneMtx2
Upstream geneAtf2, Atp5g3, LOC667729, LOC100040172, Lnp, LOC100040519, Evx2, Hoxd13, Hoxd12, Hoxd11, Hoxd10, Hoxd9, Hoxd8, 1700109F18Rik, Hoxd3, Hoxd4, LOC667804, Hoxd1
Downstream geneLOC667817, A330043C09Rik, LOC667739, LOC545423, LOC100040324, LOC667828, Hnrpa3, Nfe2l2, E030042O20Rik, LOC623453, Agps
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-270M10.bB6Ng01-270M10.g
ACCGA073030GA073031
length1,164613
definitionB6Ng01-270M10.b B6Ng01-270M10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ttgtggccacgtggtgtcagatgaatatgaaggcctggaggtaaagagtt
gtggcaagaatcactttcatattcaagtgaggctctgccctttccatgcc
atctgagccaacaagatgtcctgtgctggggctgacaggcttcagacagg
tatgagtgagtggtgcctttgggaatcccaggtccagtggccagggttta
tgttggccaggtcatcatgtccatccataccaagctgcagagtaaggaac
atgtgattgagactacatagagccaagttcaagttctctgactaccagaa
gatccacgtctgagagaagtagggtatcaccaggtttaatgcagatgaat
tttgaagacatggtctctgaaaagcagctcatttctgatagcatcacaaa
aatccccaggagcagtcccctagacaagtggcaggccctgcatttttgag
ggtctctgtagtgctctcctgtaccctacaaagtcatgtttagtaaacat
tcagtaaaaaagaaattcagtacttatattgttctttcaaaaaaacaatt
catgtttttcatttatccctttaatatctaactaaagatacctgttttag
cctagaaatttgtttgttgttttatataaaaatgtgattacagtatataa
tacttttttcctaagtaagtacctaaagtaataacatatatgaggtcagc
tttcttttgaagtcatcaaaattaaagtccccctttctcaggtggataaa
caagttactatcaccaccaccaatagaatatcgtatatttattgaactac
tctgtgccagatggtatatagagtaatccaccttgctaattgttttattc
tagaacttagaaagtttgtggacttaagaaactttgaagctgatataatt
ctaagattcatctaagtattcatcccctcactgagagctgtctgctcggt
taacccttactgttttactggctttttggtgtatgcgcatgatagtctcc
ttctaggcagcttgctttgagatccattcttctgaggtactaaccaatga
tgggtaaggatgggagagcttgtcagacaggatgcctggaggactcataa
agaaaagttattactgtaaatggtggcttggaacagcaagttcacaggca
agaacttaccttat
gaattcacagattctgtgctagtatttcactagcagctgcccctttccct
tcccttcccttcccttcccttcccttaccttaccttcccttgccttccct
tcccttcccttcccctccttgtctgacagtacagtgctctgctctcatca
tatcgaatcacatcatgccatgcctgggtggcttcgcctctcatgacatg
ttatgatagggtttggttgggtgggtcgttgtgtctgggccggtgccgtg
catgtcttgtccccacagaacccaaattgaacagaatagaatagacaagt
gcagcttctttacttgcctgaggtggggtaggattgctttttttttttct
gagaaactgaatcaaatacacaaagccaggatttcaactcagataaggta
taccctgcgaacctagatcagacgagacaggattcccttcccttctaatc
gaggtcatagaatcgactcgattcgattcgtctcagtgcagtcctgtcct
gtcccgcacaactgaactgaagggactttgtctcctgaacgcagcgcaga
gccctgtcatgtcatcttacatttcaggacgggactgatgtgatatggta
gctgggcatgcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_74693920_74695085
seq2: B6Ng01-270M10.b_53_1216

seq1  TTGTGGCCACGTGGTGTCAGATGAATATGAAGGCCTGGAGGTAAAGAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGCCACGTGGTGTCAGATGAATATGAAGGCCTGGAGGTAAAGAGTT  50

seq1  GTGGCAAGAATCACTTTCATATTCAAGTGAGGCTCTGCCCTTTCCATGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCAAGAATCACTTTCATATTCAAGTGAGGCTCTGCCCTTTCCATGCC  100

seq1  ATCTGAGCCAACAAGATGTCCTGTGCTGGGGCTGACAGGCTTCAGACAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAGCCAACAAGATGTCCTGTGCTGGGGCTGACAGGCTTCAGACAGG  150

seq1  TATGAGTGAGTGGTGCCTTTGGGAATCCCAGGTCCAGTGGCCAGGGTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGTGAGTGGTGCCTTTGGGAATCCCAGGTCCAGTGGCCAGGGTTTA  200

seq1  TGTTGGCCAGGTCATCATGTCCATCCATACCAAGCTGCAGAGTAAGGAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGCCAGGTCATCATGTCCATCCATACCAAGCTGCAGAGTAAGGAAC  250

seq1  ATGTGATTGAGACTACATAGAGCCAAGTTCAAGTTCTCTGACTACCAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGATTGAGACTACATAGAGCCAAGTTCAAGTTCTCTGACTACCAGAA  300

seq1  GATCCACGTCTGAGAGAAGTAGGGTATCACCAGGTTTAATGCAGATGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCACGTCTGAGAGAAGTAGGGTATCACCAGGTTTAATGCAGATGAAT  350

seq1  TTTGAAGACATGGTCTCTGAAAAGCAGCTCATTTCTGATAGCATCACAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGACATGGTCTCTGAAAAGCAGCTCATTTCTGATAGCATCACAAA  400

seq1  AATCCCCAGGAGCAGTCCCCTAGACAAGTGGCAGGCCCTGCATTTTTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCCAGGAGCAGTCCCCTAGACAAGTGGCAGGCCCTGCATTTTTGAG  450

seq1  GGTCTCTGTAGTGCTCTCCTGTACCCTACAAAGTCATGTTTAGTAAACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCTGTAGTGCTCTCCTGTACCCTACAAAGTCATGTTTAGTAAACAT  500

seq1  TCAGTAAAAAAGAAATTCAGTACTTATATTGTTCTTTCAAAAAAACAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTAAAAAAGAAATTCAGTACTTATATTGTTCTTTCAAAAAAACAATT  550

seq1  CATGTTTTTCATTTATCCCTTTAATATCTAACTAAAGATACCTGTTTTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTTTCATTTATCCCTTTAATATCTAACTAAAGATACCTGTTTTAG  600

seq1  CCTAGAAATTTGTTTGTTGTTTTATATAAAAATGTGATTACAGTATATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGAAATTTGTTTGTTGTTTTATATAAAAATGTGATTACAGTATATAA  650

seq1  TACTTTTTTCCTAAGTAAGTACCTAAAGTAATAACATATATGAGGTCAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTTTCCTAAGTAAGTACCTAAAGTAATAACATATATGAGGTCAGC  700

seq1  TTTCTTTTGAAGTCATCAAAATTAAAGTCCCCCTTTCTCAGGTGGATAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTGAAGTCATCAAAATTAAAGTCCCCCTTTCTCAGGTGGATAAA  750

seq1  CAAGTTACTATCACCACCACCAATAGAATATCGTATATTTATTGAACTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTACTATCACCACCACCAATAGAATATCGTATATTTATTGAACTAC  800

seq1  TCTGTGCCAGATGGTATATAGAGTAATCCACCTTGCTAATTGTTTTATTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGCCAGATGGTATATAGAGTAATCCACCTTGCTAATTGTTTTATTC  850

seq1  TAGAACTTAGAAAGTTTGTGGACTTAAGAAACTTTGAAGCTGATATAATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACTTAGAAAGTTTGTGGACTTAAGAAACTTTGAAGCTGATATAATT  900

seq1  CTAAGATTCATCTAAGTATTCATCCCCTCACTGAGAGCTGTCTGCTCGGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGATTCATCTAAGTATTCATCCCCTCACTGAGAGCTGTCTGCTCGGT  950

seq1  TAAACCCTTACTGTTTTACTGGCTTTTTGGTGTATGCGCATGATAGTCTC  1000
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  T-AACCCTTACTGTTTTACTGGCTTTTTGGTGTATGCGCATGATAGTCTC  999

seq1  CTTCTTAGGCAGCTTGCTTTGAGATCCATTCTTCTGAGGTACTTAACCCA  1050
      |||| ||||||||||||||||||||||||||||||||||||||  | |||
seq2  CTTC-TAGGCAGCTTGCTTTGAGATCCATTCTTCTGAGGTACT--AACCA  1046

seq1  ATGAT-GGTAAGGAATGGGAGAGGCTTGTCAGGACAGGGATGGCTGGAGG  1099
      ||||| ||||||| |||||||| |||||||| |||| ||||| |||||||
seq2  ATGATGGGTAAGG-ATGGGAGA-GCTTGTCA-GACA-GGATGCCTGGAGG  1092

seq1  ACTCATAAAG-AAAGTAAAATTACTGTAAATGGT-GCTGGGAACAGCA--  1145
      |||||||||| |||||   ||||||||||||||| ||| |||||||||  
seq2  ACTCATAAAGAAAAGT--TATTACTGTAAATGGTGGCTTGGAACAGCAAG  1140

seq1  GTCACAG--CAGCAC-TACCTTAT  1166
       ||||||   || || ||||||||
seq2  TTCACAGGCAAGAACTTACCTTAT  1164