BAC Information

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BAC

Clone NameB6Ng01-270O21
Chromosome2 (Build37)
Map Location 86,921,624 - 87,121,587
singlet/doubletdoublet
Overlap geneGA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923
Upstream geneOlfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047, Olfr1048, Olfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992, Olfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1, Olfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1, Olfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107
Downstream geneOlfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125, Olfr1126, Pramel7, Pramel6, LOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038, LOC668445, LOC668447, Olfr1129, Olfr1130, Olfr1131, Olfr1132, LOC100042076, Olfr1133, Olfr1134, Olfr1135, Olfr1136, Olfr1137, Olfr1138, GA_x5J8B7W3Y5M-1033291-1033773, Olfr1140, Olfr1141, Olfr152, Olfr1142-ps1, Olfr1143, GA_x5J8B7W3Y5M-1094074-1093275, Olfr1145, Olfr1146-ps1, Olfr1147-ps1, Olfr1148, Olfr1149-ps1, Olfr1150-ps1, Olfr1151, Olfr1152, Olfr1153, Olfr1154, Olfr1155, Olfr1156, Olfr1157, Olfr74, Olfr1158, Olfr1159-ps1, Olfr1160, Olfr1161, Olfr73, Olfr1162, Olfr1163, Olfr1164, Olfr1165, Olfr1166, Olfr1167, Olfr1168, Olfr1169-ps1, Olfr1170, Olfr1171-ps1, Olfr1172-ps1, Olfr1173
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-270O21.bB6Ng01-270O21.g
ACCGA073145GA073146
length8501,082
definitionB6Ng01-270O21.b B6Ng01-270O21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(87,120,740 - 87,121,587)(86,921,624 - 86,922,705)
sequence
gaattcataatcctaaattgactttataaaataaaagtataaacaccagt
attgtctttaacaaaatcattagacctttttaggtgtttatggatcacac
cttaaacacaacataatcactctacaattgtctcatgggagcagtaacat
tttttcattcatcatgcttacattcctatggctgtttgatagttctttaa
tgaaatcacattgtctttattttctgaatcctgctttgttttacaacaaa
atatttgccaagcactgtacctcgggacatgttttatcaaagtatgaatt
ctgttcattcaatattatcacaaaattataactaattttttggatttttt
ttgttttttgttttttgttttttgtgttttttgttttttggtttttttgt
ttttttgtgttttgttttgttttgttttgttttgttttgtttttcaagac
agggtttctctgtatagccctagctgtcctggaactcattcagcagacca
ggctagcctcgaactcagaaattggactgactctacctccctagtgcagg
aatgaaaggtatgtgccaccatgcccagcttccaactaaaatattttgtg
gttcccttattttatcacaatactagaactttatttcagaaactaaaatg
tagcatttgcctatgccagttatagttaaacaaataacttatcctacagt
acaatgtattacagttgtgtggttatagttaggaatttttggttctacca
tttctagatgataatcatcatcactagacgattggtatcttcaagataag
agtttaaaaacaccacttcatatgaaattacaagggtttctcattagtat

gaattcctctggttgaattaggggaaggattgaagaagctgaagggaaga
gtgaccccataggaagcctagaaatctcaactatcccagaccccagggag
cacccaaagatttagctaccaaccaagagcatacaaggactagattgagg
cacctgacacaaatatagcagagtttgcctggtcaggcctcagtggaaga
aggtgtgcttaatcctggagagacttgaagccccagggaaaggggaagcc
tcatgtctggggatcaccctcttcaaggaaagagggaagagtggatgagg
aactgtgggagggggaaccgagaagcaggggcaatgactggaatggaaat
aaacgaaataataaaaaagaaaggaaagaaaatgtctaaggaatgggaac
tggagagttggctctgcaattaagagcactaaatgcatttttagggatac
tgtgttcaattctcacttagcctctcataaccatgaataatgggatctga
tgtcttcttctgaccttcaggcattcatacagcccttatatccattataa
gtaaatgaaagaatgaataaataagtaaataaatgtctaaggatcatttc
agtggttggctcagtaaggaaaatgtttttcttgcaagtataagaaattg
agttctcaagtcactgaacatatatttaaaaaagaaagttgccaggaaat
acggaatgcatttaaatcctagcctttgggaggcagagaccgataaatta
ggagagtcattgaccataactgtgttaaaatattcagggcctgctgtgac
aggatagctgagttctagtggagagatatttgatactgattaaattttta
tgctgccctcttgtatgggaaatgattataggtctaggtgctggcttctg
gttttgatgtgttatttagatgttttattgtaaggtttctgtttccactc
tcaattttcacaggtgtcattcctatgtgttgccagttttctgctggtgt
agagacttgggatactgggctgttgttggggagaagaattgtggagttgg
aagttcttgtgatccattgagaatgggttcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_87120740_87121587
seq2: B6Ng01-270O21.b_46_895 (reverse)

seq1  ATACAAATGAGAACCCTTTGTATTTTCATATGAAGTTGTTGTTTTTAAAC  50
      |||| |||||||| || ||||| |||||||||||| || |||||||||||
seq2  ATACTAATGAGAAACCCTTGTAATTTCATATGAAG-TGGTGTTTTTAAAC  49

seq1  TCTT-TCTTTGAGAT-CCAATCGTCTATGTGATGATGATTATCATCTAAG  98
      |||| ||||  |||| ||||||||||| ||||||||||||||||||| ||
seq2  TCTTATCTTGAAGATACCAATCGTCTA-GTGATGATGATTATCATCT-AG  97

seq1  AAATGGTAGAACC-AAAATTCCTAACTATTAACCACACAACTGTACTACA  147
      ||||||||||||| |||||||||||||| |||||||||||||||| ||||
seq2  AAATGGTAGAACCAAAAATTCCTAACTA-TAACCACACAACTGTAATACA  146

seq1  TTGTAACTGTAGGATAAGTTATTTGTTTAACTATAACTGGCATAGGC-AA  196
      |||| |||||||||||||||||||||||||||||||||||||||||| ||
seq2  TTGT-ACTGTAGGATAAGTTATTTGTTTAACTATAACTGGCATAGGCAAA  195

seq1  TGCTACATTTTAGTTTCTGAAAT-AAGTTCTAGTATTGTGAT-AAATAAG  244
      ||||||||||||||||||||||| |||||||||||||||||| |||||||
seq2  TGCTACATTTTAGTTTCTGAAATAAAGTTCTAGTATTGTGATAAAATAAG  245

seq1  GGAACCACAAAATA-TTTAGTTGGAAGCTGGGCATGGTGGCACATACCTT  293
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GGAACCACAAAATATTTTAGTTGGAAGCTGGGCATGGTGGCACATACCTT  295

seq1  TCATTCCTGCACTAGGGAGGTAGAGTCAGTCCAATTTCTGAGTTCGAGGC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCCTGCACTAGGGAGGTAGAGTCAGTCCAATTTCTGAGTTCGAGGC  345

seq1  TAGCCTGGTCTGCTGAATGAGTTCCAGGACAGCTAGGGCTATACAGAGAA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTGGTCTGCTGAATGAGTTCCAGGACAGCTAGGGCTATACAGAGAA  395

seq1  ACCCTGTCTTGAAAAACAAAACAAAACAAAACAAAACAAAACAAAACACA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGTCTTGAAAAACAAAACAAAACAAAACAAAACAAAACAAAACACA  445

seq1  AAAAAACAAAAAAACCAAAAAACAAAAAACACAAAAAACAAAAAACAAAA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACAAAAAAACCAAAAAACAAAAAACACAAAAAACAAAAAACAAAA  495

seq1  AACAAAAAAAATCCAAAAAATTAGTTATAATTTTGTGATAATATTGAATG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAAAAATCCAAAAAATTAGTTATAATTTTGTGATAATATTGAATG  545

seq1  AACAGAATTCATACTTTGATAAAACATGTCCCGAGGTACAGTGCTTGGCA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAATTCATACTTTGATAAAACATGTCCCGAGGTACAGTGCTTGGCA  595

seq1  AATATTTTGTTGTAAAACAAAGCAGGATTCAGAAAATAAAGACAATGTGA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTTGTTGTAAAACAAAGCAGGATTCAGAAAATAAAGACAATGTGA  645

seq1  TTTCATTAAAGAACTATCAAACAGCCATAGGAATGTAAGCATGATGAATG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTAAAGAACTATCAAACAGCCATAGGAATGTAAGCATGATGAATG  695

seq1  AAAAAATGTTACTGCTCCCATGAGACAATTGTAGAGTGATTATGTTGTGT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATGTTACTGCTCCCATGAGACAATTGTAGAGTGATTATGTTGTGT  745

seq1  TTAAGGTGTGATCCATAAACACCTAAAAAGGTCTAATGATTTTGTTAAAG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGTGTGATCCATAAACACCTAAAAAGGTCTAATGATTTTGTTAAAG  795

seq1  ACAATACTGGTGTTTATACTTTTATTTTATAAAGTCAATTTAGGATTATG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATACTGGTGTTTATACTTTTATTTTATAAAGTCAATTTAGGATTATG  845

seq1  AATTC  848
      |||||
seq2  AATTC  850

seq1: chr2_86921624_86922705
seq2: B6Ng01-270O21.g_66_1147

seq1  GAATTCCTCTGGTTGAATTAGGGGAAGGATTGAAGAAGCTGAAGGGAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTGGTTGAATTAGGGGAAGGATTGAAGAAGCTGAAGGGAAGA  50

seq1  GTGACCCCATAGGAAGCCTAGAAATCTCAACTATCCCAGACCCCAGGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACCCCATAGGAAGCCTAGAAATCTCAACTATCCCAGACCCCAGGGAG  100

seq1  CACCCAAAGATTTAGCTACCAACCAAGAGCATACAAGGACTAGATTGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCAAAGATTTAGCTACCAACCAAGAGCATACAAGGACTAGATTGAGG  150

seq1  CACCTGACACAAATATAGCAGAGTTTGCCTGGTCAGGCCTCAGTGGAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGACACAAATATAGCAGAGTTTGCCTGGTCAGGCCTCAGTGGAAGA  200

seq1  AGGTGTGCTTAATCCTGGAGAGACTTGAAGCCCCAGGGAAAGGGGAAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTGCTTAATCCTGGAGAGACTTGAAGCCCCAGGGAAAGGGGAAGCC  250

seq1  TCATGTCTGGGGATCACCCTCTTCAAGGAAAGAGGGAAGAGTGGATGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTCTGGGGATCACCCTCTTCAAGGAAAGAGGGAAGAGTGGATGAGG  300

seq1  AACTGTGGGAGGGGGAACCGAGAAGCAGGGGCAATGACTGGAATGGAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTGGGAGGGGGAACCGAGAAGCAGGGGCAATGACTGGAATGGAAAT  350

seq1  AAACGAAATAATAAAAAAGAAAGGAAAGAAAATGTCTAAGGAATGGGAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGAAATAATAAAAAAGAAAGGAAAGAAAATGTCTAAGGAATGGGAAC  400

seq1  TGGAGAGTTGGCTCTGCAATTAAGAGCACTAAATGCATTTTTAGGGATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAGTTGGCTCTGCAATTAAGAGCACTAAATGCATTTTTAGGGATAC  450

seq1  TGTGTTCAATTCTCACTTAGCCTCTCATAACCATGAATAATGGGATCTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTCAATTCTCACTTAGCCTCTCATAACCATGAATAATGGGATCTGA  500

seq1  TGTCTTCTTCTGACCTTCAGGCATTCATACAGCCCTTATATCCATTATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCTTCTGACCTTCAGGCATTCATACAGCCCTTATATCCATTATAA  550

seq1  GTAAATGAAAGAATGAATAAATAAGTAAATAAATGTCTAAGGATCATTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATGAAAGAATGAATAAATAAGTAAATAAATGTCTAAGGATCATTTC  600

seq1  AGTGGTTGGCTCAGTAAGGAAAATGTTTTTCTTGCAAGTATAAGAAATTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTTGGCTCAGTAAGGAAAATGTTTTTCTTGCAAGTATAAGAAATTG  650

seq1  AGTTCTCAAGTCACTGAACATATATTTAAAAAAGAAAGTTGCCAGGAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTCAAGTCACTGAACATATATTTAAAAAAGAAAGTTGCCAGGAAAT  700

seq1  ACGGAATGCATTTAAATCCTAGCCTTTGGGAGGCAGAGACCGATAAATTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGAATGCATTTAAATCCTAGCCTTTGGGAGGCAGAGACCGATAAATTA  750

seq1  GGAGAGTCATTGACCATAACTGTGTTAAAATATTCAGGGCCTGCTGTGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGTCATTGACCATAACTGTGTTAAAATATTCAGGGCCTGCTGTGAC  800

seq1  AGGATAGCTGAGTTCTAGTGGAGAGATATTTGATACTGATTAAATTTTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAGCTGAGTTCTAGTGGAGAGATATTTGATACTGATTAAATTTTTA  850

seq1  TGCTGCCCTCTTGTATGGGAAATGATTATAGGTCTAGGTGCTGGCTTCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCCCTCTTGTATGGGAAATGATTATAGGTCTAGGTGCTGGCTTCTG  900

seq1  GTTTTGATGTGTTATTTAGATGTTTTATTGTAAGGTTTCTGTTTCCACTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGATGTGTTATTTAGATGTTTTATTGTAAGGTTTCTGTTTCCACTC  950

seq1  TCAATTTTCACAAGGTGTCATTCCTATGTGTTGCCAGTTTTCCTGCTGGT  1000
      ||||||||||| ||||||||||||||||||||||||||||| ||||||||
seq2  TCAATTTTCAC-AGGTGTCATTCCTATGTGTTGCCAGTTTT-CTGCTGGT  998

seq1  GTTAGAGACTT-GGATACTGGGCTG-TGTT-GGGAGAAGGAATGTTGAAG  1047
      | ||||||||| ||||||||||||| |||| |||||||| | ||| ||  
seq2  G-TAGAGACTTGGGATACTGGGCTGTTGTTGGGGAGAAGAATTGTGGAGT  1047

seq1  TTGAAGGTCTTGTGATCCATTTGAG-ATGGGTTCAA  1082
      | |||| |||||||||||| ||||| ||||||||||
seq2  TGGAAGTTCTTGTGATCCA-TTGAGAATGGGTTCAA  1082