BAC Information

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BAC

Clone NameB6Ng01-271F19
Chromosome2 (Build37)
Map Location 155,650,395 - 155,743,781
singlet/doubletdoublet
Overlap geneItgb4bp, 5530400B04Rik, 2410003P15Rik
Upstream geneRaly, Eif2s2, a, Ahcy, Itch, LOC100043877, LOC668931, Dynlrb1, Map1lc3a, Cdc91l1, Trp53inp2, Ncoa6, LOC668938, Ggtl3, Acss2, Gss, Myh7b, Trpc4ap, Edem2, Procr, Mmp24
Downstream geneGdf5, Cep250, Ergic3, Fer1l4, Spag4, Cpne1, Rbm12, Nfs1, 2010100O12Rik, Rbm39, Phf20, Scand1, LOC632394, LOC628707, LOC669792, 2900097C17Rik, LOC668941, Epb4.1l1, 0610011L14Rik, Dlgap4, Myl9, LOC433546, Tgif2, LOC100043677, 1110008F13Rik, Sla2, LOC100043880
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-271F19.bB6Ng01-271F19.g
ACCGA073464GA073465
length1,003200
definitionB6Ng01-271F19.b B6Ng01-271F19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(155,743,211 - 155,743,781)(155,650,395 - 155,650,594)
sequence
gaattcaagacctgcttgagcctgcctctgccccactgtaccccattcca
agcacggggccccttcactttcaggaccttttggttgtcattgttctacg
tatttacttattatttattgttgactcatatctcccaggctggtcttgaa
ctcgccgtgtaggagcagatgactttgaactgctgtgtgcctgtcattgt
aggcttataccaccactgcagctttgtgtggcgctgaggatggggtccag
ggctttgtgtatgctagccaagcatccccagccctcagcctttttggaaa
tgaaaaataagtgtgagattgtttttcggatttcatttcttttactgtgt
gtgtgggtgcggctgtacatgtgcacagaactcatgggaaagtcagaaga
cagctctcaggacttcactgtaggcatagagtttttgcaacctactttta
ataagggttcaaccctcctccagctcaccacccagcagaggcagtaaaaa
attattaggatacggaggaagtggacctgctcagcaatagttctttaggg
gcgagcttgatctcctttggcagcagctctgtcctgtagcaaacaccaaa
catgattcagcagctgcagaccaggcctctagataggcagacaccaggca
tgaaccagcagctatagtctagtcctgaagaaaccaccaggcttgcccac
tagcctgaggtgaggctgcagaagtggcaagctgccccaggaacctcaag
agcaatgctagggtgagtttcttctctcaatggtggtgttaccacaagtt
gagctcaacaacagcatgtaagataaacaaatgtgtgtctttatcgaaga
atagtgaggtggagcaaaccaaatcaaggctcagtgctcacctcccactg
tctgtggggtcagatttctactccttcatcaggtgtcctttcacgtgttt
ggtatttcaaaacatccttatgcctgtgtctgcttcaggaaacagtcttc
cac
actctgtagaccaggctggcctcgaactcagaaatccacctgcctctgcc
ttccaagtgctgggattaaaggcatgcgctaccactgcctggccagtagt
actagtcttaagacaccaaactataaattgtctaaatactcattaacgta
agaatggcatttttaaaccgggtgtggtggcgcccaccttttatcccagc

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_155743211_155743781
seq2: B6Ng01-271F19.b_43_613 (reverse)

seq1  GCCAAAGGAGATCAAGCTCGCCCCTAAAGAACTATTGCTGAGCAGGTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAAGGAGATCAAGCTCGCCCCTAAAGAACTATTGCTGAGCAGGTCCA  50

seq1  CTTCCTCCGTATCCTAATAATTTTTTACTGCCTCTGCTGGGTGGTGAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCCGTATCCTAATAATTTTTTACTGCCTCTGCTGGGTGGTGAGCT  100

seq1  GGAGGAGGGTTGAACCCTTATTAAAAGTAGGTTGCAAAAACTCTATGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAGGGTTGAACCCTTATTAAAAGTAGGTTGCAAAAACTCTATGCCT  150

seq1  ACAGTGAAGTCCTGAGAGCTGTCTTCTGACTTTCCCATGAGTTCTGTGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGAAGTCCTGAGAGCTGTCTTCTGACTTTCCCATGAGTTCTGTGCA  200

seq1  CATGTACAGCCGCACCCACACACACAGTAAAAGAAATGAAATCCGAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTACAGCCGCACCCACACACACAGTAAAAGAAATGAAATCCGAAAAA  250

seq1  CAATCTCACACTTATTTTTCATTTCCAAAAAGGCTGAGGGCTGGGGATGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTCACACTTATTTTTCATTTCCAAAAAGGCTGAGGGCTGGGGATGC  300

seq1  TTGGCTAGCATACACAAAGCCCTGGACCCCATCCTCAGCGCCACACAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTAGCATACACAAAGCCCTGGACCCCATCCTCAGCGCCACACAAAG  350

seq1  CTGCAGTGGTGGTATAAGCCTACAATGACAGGCACACAGCAGTTCAAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGTGGTGGTATAAGCCTACAATGACAGGCACACAGCAGTTCAAAGT  400

seq1  CATCTGCTCCTACACGGCGAGTTCAAGACCAGCCTGGGAGATATGAGTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGCTCCTACACGGCGAGTTCAAGACCAGCCTGGGAGATATGAGTCA  450

seq1  ACAATAAATAATAAGTAAATACGTAGAACAATGACAACCAAAAGGTCCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATAAATAATAAGTAAATACGTAGAACAATGACAACCAAAAGGTCCTG  500

seq1  AAAGTGAAGGGGCCCCGTGCTTGGAATGGGGTACAGTGGGGCAGAGGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGAAGGGGCCCCGTGCTTGGAATGGGGTACAGTGGGGCAGAGGCAG  550

seq1  GCTCAAGCAGGTCTTGAATTC  571
      |||||||||||||||||||||
seq2  GCTCAAGCAGGTCTTGAATTC  571

seq1: chr2_155650395_155650594
seq2: B6Ng01-271F19.g_72_271

seq1  ACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCC  50

seq1  TTCCAAGTGCTGGGATTAAAGGCATGCGCTACCACTGCCTGGCCAGTAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAGTGCTGGGATTAAAGGCATGCGCTACCACTGCCTGGCCAGTAGT  100

seq1  ACTAGTCTTAAGACACCAAACTATAAATTGTCTAAATACTCATTAACGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTCTTAAGACACCAAACTATAAATTGTCTAAATACTCATTAACGTA  150

seq1  AGAATGGCATTTTTAAACCGGGTGTGGTGGCGCCCACCTTTAATCCCAGC  200
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AGAATGGCATTTTTAAACCGGGTGTGGTGGCGCCCACCTTTTATCCCAGC  200