BAC Information

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BAC

Clone NameB6Ng01-271P22
Chromosome2 (Build37)
Map Location 120,394,814 - 120,395,740
singlet/doubletsinglet
Overlap geneSnap23
Upstream gene1500003O03Rik, LOC100043307, Oip5, Nusap1, Ndufaf1, LOC625328, LOC100043622, Rtf1, Itpka, Ltk, Rpap1, Tyro3, 6330405D24Rik, LOC625403, Mga, Mapkbp1, Pla2g4b, Spnb5, Ehd4, Pla2g4e, LOC100043635, Pla2g4d, Pla2g4f, Vps39, Tmem87a, Ganc, Capn3, Zfp106
Downstream geneLrrc57, Cep27, Stard9, Cdan1, Ttbk2, Ubr1, Tmem62, Rnu3b-ps2, Ccndbp1, Epb4.2, Tgm5, LOC640543, Lcmt2, Adal, Zscan29, D2Ertd435e, Trp53bp1, Mtap1a, Hisppd2a, Ckmt1, Strc, Catsper2, Pdia3, Ell3, Serf2, LOC574418, 2310003F16Rik, Mfap1b, Wdr76p, Mfap1a, Wdr76, Frmd5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-271P22.bB6Ng01-271P22.g
ACCGA073929GA073930
length9391,093
definitionB6Ng01-271P22.b B6Ng01-271P22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccctgagcacttgttatttgttcttttggtgagaggttatgcgaa
agaatacattcaagtagataatagcaaattggaaacactttcttaccatg
cttctgggacaggccatattaaagtaagttaaatgattaaactttgcctg
taccttaaataattatcattcttagcaggacttcttgtttcattttgctt
tttaggtggcttcttgttgggggtggggtctcctttctacattgtagcaa
ccataaaaccaagtgagactgggccagaattgggagtgggtagctggagt
cccaggtgagtatctagtgacaccctgtcctctgtcaacaggccccaatc
ctgagagtcttttgtgagtaattccagttgttctgattaagatggtaatg
cttatttatgctctgaggacagtgctccataatcacatatttaatacttc
tgagacggggttatataagccagcctcagcaacctcatgaaacctcatct
caaaacaacaattaaacaatagacctatattaaatatatgtctcccagtt
agttctctcaacctggtggttgagagatctgagctctcagctattgctca
agctccctctgcttgcttctgtgctccttggccatgatggtcggataaat
ggtttcttgtgtaagttgccatgttcatggtcctttgttccaggaatagt
aaaaatgaactaagatagaagctggtgccgggcggtggtaacgcacgcct
tttaatcccagcactcgggagggcagaggctggcagatttctgagttcga
ggctcagcctggtcctacagggtgagtttccaggacagccaggaactaca
cagagaaaccctggtctcgaaaaaaaaaaaaaaaaacaaacaaaaaaaag
atagaagctgggtactgttttagaacaagaccaaaatga
gaattctggtcaagactcaactttaatgttggcctgacatgctttataaa
ggagaggggaggcccattcccagtcatgcaaagttccttgtgaagttgtc
agatcagccttttagcaggaaccctcgaaaatcacagtttggtgttaact
ccagaagatctaggagaactggttcggcctcaggcaggtagcaggtagtg
gcacatcaaaggagagtgatgagaagcagcacagcaggtggctcagccta
agtggtggatggtctcagccagccttgctaggctggaaggaggttacact
gtagtaagttccagtgtgtcccacagtatatccctctgtccacacatctt
tacttgcaaatgttcattgcaatgagtcattggtctggttcaagatccct
ggcttttgtgacatcatgaatattggatccttatcaagatgcctctcaaa
tacctgtgtcatggagatcctccagctttgaaacagcaggtctggtcctt
tcacgtgtcccaactatttgcagatgataatagattttgggtaggccagt
tcagatccctggatctgggcctgggtggtagctgggctggtcagccctat
ccgtgttactagagtgagctgtctactgctccagctaggctacccaatca
atgctggtatcaggaggaggcagtcatctcttctgctttcatgccattgg
accagtcttacctgtacctacacctccagagccagctctactgtgctact
cagtcaaggtacagggcccattctccaagtgtagctggtgagaggctggg
ccagcctttaccactctcacactcttaggactggctcaccagtgcctttg
ccatcagggccagctccactgtgttgtccatgctaggggtagggttagcc
cttctgatctcatgcccccagggccatttctctgggctactgcaggtgtg
agaggtgtcggggaggcatcacctctgcacccacgccacctaatctcacc
ctctgaagggctagctcatctggtccctcttcacaaagccagctctactg
ttgctgcaactgctgaggggcgagctaagcttcatatcactct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_120394814_120395740
seq2: B6Ng01-271P22.b_48_986

seq1  GAATTCCCTGAGCACTTGTTATTTGTTCTTTTGGTGAGAGGTTATGCGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTGAGCACTTGTTATTTGTTCTTTTGGTGAGAGGTTATGCGAA  50

seq1  AGAATACATTCAAGTAGATAATAGCAAATTGGAAACACTTTCTTACCATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATACATTCAAGTAGATAATAGCAAATTGGAAACACTTTCTTACCATG  100

seq1  CTTCTGGGACAGGCCATATTAAAGTAAGTTAAATGATTAAACTTTGCCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGGGACAGGCCATATTAAAGTAAGTTAAATGATTAAACTTTGCCTG  150

seq1  TACCTTAAATAATTATCATTCTTAGCAGGACTTCTTGTTTCATTTTGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTAAATAATTATCATTCTTAGCAGGACTTCTTGTTTCATTTTGCTT  200

seq1  TTTAGGTGGCTTCTTGTTGGGGGTGGGGTCTCCTTTCTACATTGTAGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGTGGCTTCTTGTTGGGGGTGGGGTCTCCTTTCTACATTGTAGCAA  250

seq1  CCATAAAACCAAGTGAGACTGGGCCAGAATTGGGAGTGGGTAGCTGGAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAAAACCAAGTGAGACTGGGCCAGAATTGGGAGTGGGTAGCTGGAGT  300

seq1  CCCAGGTGAGTATCTAGTGACACCCTGTCCTCTGTCAACAGGCCCCAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGTGAGTATCTAGTGACACCCTGTCCTCTGTCAACAGGCCCCAATC  350

seq1  CTGAGAGTCTTTTGTGAGTAATTCCAGTTGTTCTGATTAAGATGGTAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAGTCTTTTGTGAGTAATTCCAGTTGTTCTGATTAAGATGGTAATG  400

seq1  CTTATTTATGCTCTGAGGACAGTGCTCCATAATCACATATTTAATACTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTATGCTCTGAGGACAGTGCTCCATAATCACATATTTAATACTTC  450

seq1  TGAGACGGGGTTATATAAGCCAGCCTCAGCAACCTCATGAAACCTCATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACGGGGTTATATAAGCCAGCCTCAGCAACCTCATGAAACCTCATCT  500

seq1  CAAAACAACAATTAAACAATAGACCTATATTAAATATATGTCTCCCAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAACAATTAAACAATAGACCTATATTAAATATATGTCTCCCAGTT  550

seq1  AGTTCTCTCAACCTGGTGGTTGAGAGATCTGAGCTCTCAGCTATTGCTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTCTCAACCTGGTGGTTGAGAGATCTGAGCTCTCAGCTATTGCTCA  600

seq1  AGCTCCCTCTGCTTGCTTCTGTGCTCCTTGGCCATGATGGTCGGATAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCCTCTGCTTGCTTCTGTGCTCCTTGGCCATGATGGTCGGATAAAT  650

seq1  GGTTTCTTGTGTAAGTTGCCATGTTCATGGTCCTTTGTTCCAGGAATAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCTTGTGTAAGTTGCCATGTTCATGGTCCTTTGTTCCAGGAATAGT  700

seq1  AAAAATGAACTAAGATAGAAGCTGGTGCCGGGCGGTGGTAACGCACGCC-  749
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AAAAATGAACTAAGATAGAAGCTGGTGCCGGGCGGTGGTAACGCACGCCT  750

seq1  TTTAATCCCAGCACTCGGGA-GGCAGAGGCTGGCAGATTTCTGAGTTCGA  798
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TTTAATCCCAGCACTCGGGAGGGCAGAGGCTGGCAGATTTCTGAGTTCGA  800

seq1  GGC-CAGCCTGGT-CTACAGGGTGAG-TTCCAGGACAGCCAGG-ACTACA  844
      ||| ||||||||| |||||||||||| |||||||||||||||| ||||||
seq2  GGCTCAGCCTGGTCCTACAGGGTGAGTTTCCAGGACAGCCAGGAACTACA  850

seq1  CAGAGAAACCCT-GTCTCG-AAAAAAAAAAAAAAAACAAAC-AAAAAAAG  891
      |||||||||||| |||||| ||||||||||||||||||||| ||||||||
seq2  CAGAGAAACCCTGGTCTCGAAAAAAAAAAAAAAAAACAAACAAAAAAAAG  900

seq1  ATAGAAGCT-GGTACTG-TTTAGACCAGGA-CAAAATGA  927
      ||||||||| ||||||| |||||| || || ||||||||
seq2  ATAGAAGCTGGGTACTGTTTTAGAACAAGACCAAAATGA  939