BAC Information

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BAC

Clone NameB6Ng01-272A18
Chromosome2 (Build37)
Map Location 86,099,398 - 86,100,498
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr987, GA_x5J8B7W531T-1241080-1240524, Olfr988, GA_x5J8B7W531T-1286425-1285652, Olfr990-ps1, Olfr991-ps1, Olfr992, Olfr993, Olfr994, Olfr995, 4833423E24Rik, Olfr996, Olfr997-ps1, Olfr998, Olfr999-ps1, Olfr1000, Olfr1001-ps1, Olfr1002, GA_x5J8B7W531T-1558688-1559570, Olfr1004-ps1, Olfr154, GA_x5J8B7W531T-1577060-1577325, Olfr1006, GA_x5J8B7W531T-1588603-1588734, Olfr1008, Olfr1009, Olfr1010, Olfr1012, Olfr1013, Olfr1014, Olfr1015, Olfr1016, GA_x5J8B7W3KVV-518538-519236, Olfr1018, Olfr1019, Olfr1020, Olfr1021-ps1, Olfr1022, Olfr1023, Olfr1024, Olfr1025-ps1, Olfr1026, Olfr1027-ps1, Olfr1028, Olfr1029, Olfr1030, Olfr1031, Olfr1032, LOC100042075, Olfr1033, Olfr1034, Olfr1533-ps1, Olfr1035-ps1, Olfr1036, Olfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047, Olfr1048, Olfr1049
Downstream geneOlfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992, Olfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1, Olfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1, Olfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-272A18.bB6Ng01-272A18.g
ACCGA073969GA073970
length1,1851,108
definitionB6Ng01-272A18.b B6Ng01-272A18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatcatttttagaagctaaatagtattctgttgtgatataccaca
ttttctgtatcaattttacagttgatagacatctgtgttgtttccagttt
ctgaatattacctacgaaactgcagtggatatagtggaacctgtatcctt
gtgctataatggaccatcttttgggaatatgcccaggagaggtatagcta
ggtcttcaggcagaactttgccaattttctgagaaaatgccacattgatt
ttgagtggttatataagtttgtacttccacaagcaatggaagggtatttt
cctttctccagatcctctgcagcatgtactctcacttgagtttttatctt
agccattctgatggctgtaagatggactgtcatggatgttttgatttgcc
cttcccttgtgactttggagattgaagggttttttttttttaagttcttc
tcaacaatcttctgttgagaattctctgtttagctctgtagcccattttt
taattgggttatttggttttctggagtctaccttcttgagttcttcatat
attgtgtatattagtcctctgtcagatgtagaattagtaaagatattttc
ccaatctgtatactgccattttctcctattgacagcagtgtcctttgctt
tatagaagcttttcagtttcaggagggcctaggaggactgaaatggtaat
cgcagttagggcctcttttcgctggcagaccaacgaagaggacgaattag
tggactgatcccacaaatgaaaaaaaaaaaaaaaaaaactcttctgaatg
ataataaatcaatagaggaaccaattgcacaagaatgcaaaaatcagatt
ttttcttcaaaaaaggcactggctgagaggcaggggtgaggctatcaaga
caacccaccaaagtttcatttggaggaactaaatattggctactaatatc
aggtgcaagggcagtattactaagatgggcatactatgaagggtgtatta
gaagtcacacagagaccaaccctgagactgatagagagataaacattcac
tttccgctggcagcagtaatgtgagaatatttgttgcgtaattgcaggaa
cagcaatgcgtcataaagtggtgggcatgtaacaagcagcatctcagata
gggagtgccataggataaactttggatcaacctag
gaattccctatcaccaacaaaagtgctcagacaatgtctgatctccatca
agagatcatttgccaatttgaaatcccagcagccttatttataatagcca
ggagctggaaagaacacagatgtccttcaacagaggaatccatacagaaa
atgtggttcatttacataatggagtactctcagctattaaaaacaatgag
ttcgcccttctggtcggcgccagcactgggtcaccttgggcgctgagtct
gtggacacccctgaagtcccctagagaactctccatgtgatcttaggagc
acaggtgagtggaacacaacttctgttcctatccaatcatgtgggacatg
agacagcattagacaagcagtttttgtttcttatctcttaaaagactgat
cttttcatatgagagaaaaagtaggtgtgtctagatggaaaaggaagtgg
ggaggaacaagtaggggtatagggagggaaaaaaaagatcagaatatttt
atatgagaaaaaattataataaaaaataaaacaaatttcaccaaaaatag
caaaagtttagtcactttatgaacatgattacttcttaaatgataaattt
tttgtcattaaatttataagtaaacatttagaaagaaatgaaatatgatt
catgtttctattttctgtgttaaaaatcatatgtacatttggcattcata
ataatagggaaatgagatggccacacctcaattcagtaatagagaatgct
agaagtgtgggaaattttccactgaaaatcccaagatccagggattatgt
cctaatatttagagctaataaaatttgaatcagaataaacaaatttatag
gaatatttatgttgggatttccacgagaaccaagactacaatcttatcag
tagaagactttatatagataagaggcttgagacaacaaaagtaatcctgg
ccatgtgttgatttttcacagggaagctgatgattgatagaatttagcag
tatgccattgagtgtttcatgtatgtaaactcagttgcaggaacaaaaag
gtatggattaatacccattgctgggcattggggcaatgaattggttaatg
gggtaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_86099398_86100498
seq2: B6Ng01-272A18.g_64_1171 (reverse)

seq1  CCTTACCCCA-TAAC--AATCATT-TCCCAATGCCAAGCAATGGGGTATT  46
      |||||||||| ||||  | |||||  ||||||||| |||||| |||||||
seq2  CCTTACCCCATTAACCAATTCATTGCCCCAATGCCCAGCAAT-GGGTATT  49

seq1  -ATCCATA-CTTTTTGTTCCTGCAACTGAGTTTTACATACATTGAAACAC  94
       ||||||| ||||||||||||||||||||| |||||||||| ||||||||
seq2  AATCCATACCTTTTTGTTCCTGCAACTGAG-TTTACATACA-TGAAACAC  97

seq1  TCAAT-GCATACTGCTAATTTTCTATCAATCATCAGCTTCCTTGTGAAAA  143
      ||||| ||||||||||||  ||||||||||||||||||||| ||||||||
seq2  TCAATGGCATACTGCTAA-ATTCTATCAATCATCAGCTTCCCTGTGAAAA  146

seq1  ATC-ACACAT-GCCAGGATTAC-TTTGTTGTCTCAAG-CTCTTATCTATA  189
      ||| |||||| ||||||||||| |||||||||||||| ||||||||||||
seq2  ATCAACACATGGCCAGGATTACTTTTGTTGTCTCAAGCCTCTTATCTATA  196

seq1  TAAAGTCTTCTACTGATAAAGATTGTAGTCTTGGTTCTCGTGGAAAT-CC  238
      ||||||||||||||||| ||||||||||||||||||||||||||||| ||
seq2  TAAAGTCTTCTACTGAT-AAGATTGTAGTCTTGGTTCTCGTGGAAATCCC  245

seq1  AACATAAATATTCCTATAAATTTGTTTATTCTGATTCAAATTTTATTAGC  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAAATATTCCTATAAATTTGTTTATTCTGATTCAAATTTTATTAGC  295

seq1  TCTAAATATTAGGACATAATCCCTGGATCTTGGGATTTTCAGTGGAAAAT  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATATTAGGACATAATCCCTGGATCTTGGGATTTTCAGTGGAAAAT  345

seq1  TTCCCACACTTCTAGCATTCTCTATTACTGAATTGAGGTGTGGCCATCTC  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCACACTTCTAGCATTCTCTATTACTGAATTGAGGTGTGGCCATCTC  395

seq1  ATTTCCCTATTATTATGAATGCCAAATGTACATATGATTTTTAACACAGA  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCCTATTATTATGAATGCCAAATGTACATATGATTTTTAACACAGA  445

seq1  AAATAGAAACATGAATCATATTTCATTTCTTTCTAAATGTTTACTTATAA  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGAAACATGAATCATATTTCATTTCTTTCTAAATGTTTACTTATAA  495

seq1  ATTTAATGACAAAAAATTTATCATTTAAGAAGTAATCATGTTCATAAAGT  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATGACAAAAAATTTATCATTTAAGAAGTAATCATGTTCATAAAGT  545

seq1  GACTAAACTTTTGCTATTTTTGGTGAAATTTGTTTTATTTTTTATTATAA  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAAACTTTTGCTATTTTTGGTGAAATTTGTTTTATTTTTTATTATAA  595

seq1  TTTTTTCTCATATAAAATATTCTGATCTTTTTTTTCCCTCCCTATACCCC  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTCATATAAAATATTCTGATCTTTTTTTTCCCTCCCTATACCCC  645

seq1  TACTTGTTCCTCCCCACTTCCTTTTCCATCTAGACACACCTACTTTTTCT  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGTTCCTCCCCACTTCCTTTTCCATCTAGACACACCTACTTTTTCT  695

seq1  CTCATATGAAAAGATCAGTCTTTTAAGAGATAAGAAACAAAAACTGCTTG  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATATGAAAAGATCAGTCTTTTAAGAGATAAGAAACAAAAACTGCTTG  745

seq1  TCTAATGCTGTCTCATGTCCCACATGATTGGATAGGAACAGAAGTTGTGT  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATGCTGTCTCATGTCCCACATGATTGGATAGGAACAGAAGTTGTGT  795

seq1  TCCACTCACCTGTGCTCCTAAGATCACATGGAGAGTTCTCTAGGGGACTT  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTCACCTGTGCTCCTAAGATCACATGGAGAGTTCTCTAGGGGACTT  845

seq1  CAGGGGTGTCCACAGACTCAGCGCCCAAGGTGACCCAGTGCTGGCGCCGA  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGTGTCCACAGACTCAGCGCCCAAGGTGACCCAGTGCTGGCGCCGA  895

seq1  CCAGAAGGGCGAACTCATTGTTTTTAATAGCTGAGAGTACTCCATTATGT  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAGGGCGAACTCATTGTTTTTAATAGCTGAGAGTACTCCATTATGT  945

seq1  AAATGAACCACATTTTCTGTATGGATTCCTCTGTTGAAGGACATCTGTGT  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAACCACATTTTCTGTATGGATTCCTCTGTTGAAGGACATCTGTGT  995

seq1  TCTTTCCAGCTCCTGGCTATTATAAATAAGGCTGCTGGGATTTCAAATTG  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCAGCTCCTGGCTATTATAAATAAGGCTGCTGGGATTTCAAATTG  1045

seq1  GCAAATGATCTCTTGATGGAGATCAGACATTGTCTGAGCACTTTTGTTGG  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATGATCTCTTGATGGAGATCAGACATTGTCTGAGCACTTTTGTTGG  1095

seq1  TGATAGGGAATTC  1101
      |||||||||||||
seq2  TGATAGGGAATTC  1108