BAC Information

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BAC

Clone NameB6Ng01-272C06
Chromosome2 (Build37)
Map Location 8,388,892 - 8,389,993
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040648, LOC672230
Downstream geneLOC100040710
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-272C06.bB6Ng01-272C06.g
ACCGA074041GA074042
length1,0861,100
definitionB6Ng01-272C06.b B6Ng01-272C06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaatgaaaatgaacaaacaacatacccaaacatatgagactgaag
gaaagcagtgctaagaagaaaattcatagcactaagtaccttcataaaat
aaaaaactgaagagatcttatccaagcaacataaaagcacatgtgaaagc
tctagaacaaaaagaagcaaagacacctaagaggagcagatgggaggaaa
tagtcaaactcagggctgaaatcaatcattttgaaacaaaaagaacaata
ctaaaaatcaacaagcccaagagctggtcctttgagaacatcaacaagat
agacaaacccttagccaaacttattaaaaggcatagaggcagtatccaaa
ttaacaaaatcagaaatgaaaagggaaacataacaacagaaattgagaaa
aatcaaaacatcattaggtcttacttcaaaagcctgtagtccacaaaact
ggaaaatcaaatgattttctagacagatgccactttcaaagttaaatcaa
ggtcaggtaaactatctaaacagtctcataactcctataaaaattgaacc
agtccttaaactcaagagaacgaagaccaaagtgtggacactttgcccct
tcttagaataggaaacaaaacacccatggaaggagttacagagacaaaat
ttggaagtgtgacgaaaggatggaccatctagtgattgccatatccagag
atccatcccatgatcagcttccaaacgctgacaccattgcatacactagc
aagattttgctgaaaggacccagatatagctgtctcttgtgagactatgc
cggggcctagcaaacacagaagtggatgctcacagtcagctattgaatgg
ttcacagggcccccaatggaggagctagagaaagcacccaaggaactaaa
gggaactgcaaccctatagtggaacaacaatatgaactaaccagtaccca
ggagctcttatctctagctgcatatgtatcaaagatggcctataggccat
cactggaaagagagcccatgactgcaactttatatgcccagtacagggga
cgccagggccaaaaaagtagtgcggttggtattggg
gaattcctgtttggctctgtacctcatgctttaattggcttatttgggtt
tttttttttttttttttttttttttttggagtcgaacttcttcactaacc
ctatacctgtagaggactaaaatctaaaatgttattttaaagcagcagtt
ttagaactatattcaagagatctctagattgcctgtgaaaaacttaataa
tttaaagggggtagaaaaagggagacttaactgagcagttctaccattca
ctgctttatgggtaggattaaactaagagcagatgtaaaggcatactaat
ttaaaatagaatggatttctgtcaggatttccaaggctgcattggcagac
cattgctctgtgcttgtgatttccataatcaaggcttttgagacagacat
ctgttttccaatcctgtaagagtttaagtatggaagggaagccttttgtg
gattctttgttttgctctcctaggataatcccagggtgtctacatattga
atatcactcctccttaccagtaaggacaaacagaaacctacgaatgaaga
gaaatctagggaaagcagctttaagatgactccagggttattctcattac
atcatttgtgttctatgggctcaaacttagtattccagtaatactgagcc
aggagaaagactcagtgtaattagtacttgtaataaggtgccaagctaag
gcttagcggttctcattttaaaaaaatggctagaatgaaaattgaaattt
gatggagaaaaaatatccctctatcacacagtcttttgcttttttttttg
tctcaaattataatgttacagaatttttttattaaattaagaattttatg
taaggcttcagacaatcatggcagaggatttataacaatgacattagaag
caaatattaagcttaatgtcagttaatggtgagaaatatccaggcttggt
gttttagaatactatctatgaattcttctggaaatggttttcaaatcttt
acattatttctgggagagaatttctaagcaaactatgtgcctgcatttga
tatggaaaaggaaaaaaatttaagggcatggatttagttaacatttagct

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_8388892_8389993
seq2: B6Ng01-272C06.g_67_1166 (reverse)

seq1  AGCTAAATGGTTTAACTTATATCATGCCTTTTAAATTTTTTTCTTTTTCA  50
      |||||||||  |||||| |   |||||| || || |||||| ||||| ||
seq2  AGCTAAATG--TTAACTAAATCCATGCCCTTAAATTTTTTTCCTTTTCCA  48

seq1  TATCAAATGCAAGCAACATTAGTTTGCTTAGAAATTTCTCTCCAGAAAAT  100
      ||||||||||| || ||| ||||||||||||||| ||||||||   ||||
seq2  TATCAAATGCAGGC-ACA-TAGTTTGCTTAGAAA-TTCTCTCCCAGAAAT  95

seq1  AAATGTTAAAGATTTGAAAA-CATTT-CAGAAGAATTCATAAGATAGTA-  147
       |||| |||||||||||||| ||||| ||||||||||||| |||||||| 
seq2  -AATG-TAAAGATTTGAAAACCATTTCCAGAAGAATTCAT-AGATAGTAT  142

seq1  TCTAAAACA-CAAGCCTGGATATTTCTCAACATTAACTGACATTAAGCTT  196
      ||||||||| ||||||||||||||||||| ||||||||||||||||||||
seq2  TCTAAAACACCAAGCCTGGATATTTCTCACCATTAACTGACATTAAGCTT  192

seq1  AATATTTGCTTCTTAATGTCATTGTTATAAAT-CTCTGCCATGATTGTCT  245
      |||||||||||| ||||||||||||||||||| |||||||||||||||||
seq2  AATATTTGCTTC-TAATGTCATTGTTATAAATCCTCTGCCATGATTGTCT  241

seq1  GAAGCCTTACATAAAATTCTTAA-TTAAT-AAAAAATTCTGTAACATTAT  293
      ||||||||||||||||||||||| ||||| ||||||||||||||||||||
seq2  GAAGCCTTACATAAAATTCTTAATTTAATAAAAAAATTCTGTAACATTAT  291

seq1  AATTTGAGACAAAAAAAAAAGCAAAAGACTGTGTGATAGAGGGATATTTT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGAGACAAAAAAAAAAGCAAAAGACTGTGTGATAGAGGGATATTTT  341

seq1  TTCTCCATCAAATTTCAATTTTCATTCTAGCCATTTTTTTAAAATGAGAA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCATCAAATTTCAATTTTCATTCTAGCCATTTTTTTAAAATGAGAA  391

seq1  CCGCTAAGCCTTAGCTTGGCACCTTATTACAAGTACTAATTACACTGAGT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCTAAGCCTTAGCTTGGCACCTTATTACAAGTACTAATTACACTGAGT  441

seq1  CTTTCTCCTGGCTCAGTATTACTGGAATACTAAGTTTGAGCCCATAGAAC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCCTGGCTCAGTATTACTGGAATACTAAGTTTGAGCCCATAGAAC  491

seq1  ACAAATGATGTAATGAGAATAACCCTGGAGTCATCTTAAAGCTGCTTTCC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATGATGTAATGAGAATAACCCTGGAGTCATCTTAAAGCTGCTTTCC  541

seq1  CTAGATTTCTCTTCATTCGTAGGTTTCTGTTTGTCCTTACTGGTAAGGAG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATTTCTCTTCATTCGTAGGTTTCTGTTTGTCCTTACTGGTAAGGAG  591

seq1  GAGTGATATTCAATATGTAGACACCCTGGGATTATCCTAGGAGAGCAAAA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGATATTCAATATGTAGACACCCTGGGATTATCCTAGGAGAGCAAAA  641

seq1  CAAAGAATCCACAAAAGGCTTCCCTTCCATACTTAAACTCTTACAGGATT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAATCCACAAAAGGCTTCCCTTCCATACTTAAACTCTTACAGGATT  691

seq1  GGAAAACAGATGTCTGTCTCAAAAGCCTTGATTATGGAAATCACAAGCAC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAACAGATGTCTGTCTCAAAAGCCTTGATTATGGAAATCACAAGCAC  741

seq1  AGAGCAATGGTCTGCCAATGCAGCCTTGGAAATCCTGACAGAAATCCATT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAATGGTCTGCCAATGCAGCCTTGGAAATCCTGACAGAAATCCATT  791

seq1  CTATTTTAAATTAGTATGCCTTTACATCTGCTCTTAGTTTAATCCTACCC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTAAATTAGTATGCCTTTACATCTGCTCTTAGTTTAATCCTACCC  841

seq1  ATAAAGCAGTGAATGGTAGAACTGCTCAGTTAAGTCTGCCTTTTTCTACC  893
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ATAAAGCAGTGAATGGTAGAACTGCTCAGTTAAGTCTCCCTTTTTCTACC  891

seq1  CACTTTAAATTATTAAGTTTTTCACAGGCAATCTAGAGATCTCTTGAATA  943
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTAAATTATTAAGTTTTTCACAGGCAATCTAGAGATCTCTTGAATA  941

seq1  TAGTTCTAAAACTGCTGCTTTAAAATAACATTTTAGATTTTAGTCCTCTA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCTAAAACTGCTGCTTTAAAATAACATTTTAGATTTTAGTCCTCTA  991

seq1  CAGGTATAGGGTTAGTGAAGAAGTTCGACTCCAAAAAAAAAAAAAAAAAA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTATAGGGTTAGTGAAGAAGTTCGACTCCAAAAAAAAAAAAAAAAAA  1041

seq1  AAAAAAAAAAACCCAAATAAGCCAATTAAAGCATGAGGTACAGAGCCAAA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAACCCAAATAAGCCAATTAAAGCATGAGGTACAGAGCCAAA  1091

seq1  CAGGAATTC  1102
      |||||||||
seq2  CAGGAATTC  1100