BAC Information

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BAC

Clone NameB6Ng01-273D18
Chromosome2 (Build37)
Map Location 78,379,454 - 78,380,640
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp533, BC003993, LOC667920, OTTMUSG00000016703, LOC383717
Downstream geneLOC100040476, LOC100040494, 4930401B11Rik, Ube2e3, LOC100040526, Itga4, Cerkl, Neurod1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273D18.bB6Ng01-273D18.g
ACCGA074859GA074860
length1,1851,011
definitionB6Ng01-273D18.b B6Ng01-273D18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaagccaggcactagaattagagttaacagacatacatccctag
aatataaagtcaaatttggattaagttcaattgaagaaatcactattgaa
atttcttacggacactttaatcttcttctaaattaaatcagtcattcatg
aggggaaacctctgagacagcagtcgcatctggtcggtaggcagggctca
cgacttacaaagtgcggtttgttttaccgaaatacgctgtcttccaaact
agctaattttcttttagtctagatttagaaatataaatttaatgtttttt
aataatttgcataaaatatttagtccatacatattttggatcatttatta
tttatgtatttatagacacaaaaccctttcatatgttgggtaaatgttct
gccactgggctacgttgccaaccctaacttgtgggtttgtaatgcagtca
actttaaaactgttaccaaataggattagcttaactttcctgagtcatga
ggaaaaaatttccccaagatatgtcaaatttgactggctaacccagactc
taattatagcagcacagaaacttactttgcatctacacgtgaaatccatg
aattcagaaaggtcaaagactcgaggctcacttataagcattcattttta
ccattaccagcatataagcagatagaatgtctcttttctctattctgctc
ttactgtcaagccacaaatccagccatgccaaagtacttccagattcccc
gaaggacttgctggctcctttcccaacactaactttcccatggctttgct
acttagaatggtctttgttttcttcttacatcacgcctccgagtatttca
aggacattgggctgtgtcctctacagagattcctccctgagtcctctggt
gtgtgtaggtgacatctttcccctctctcaggaccctacagctctcacca
tcctggacctgagtgatttatttcttgtctgcttggggagcaggactgtg
tcatttatctcacctttggtggcatgcagtgattatcagtgaatgtttac
tgaaaggatggaataccttttcacttgaagctactcttggcttcatttta
ttcggagtgattttatcaccacgaatggataatggttactcttcaccttt
tcacagctgaagcttaactggggaacatgggacaa

gaattctcagcagaggaatttcaaatgaccaagaaacagttaaagaaatg
ttcaacattcttggccattggggaaatacaaatcaaaatgactctgagat
tccaccttacatccatcagaatgtctcagatcaaaagctcaaatggcagc
tcatgctggtgaggatgtggagcaaggggaactctcctccattgctggtg
agagtacatacttgtacagctactttggaaatcaatatggcagtttctca
aaaattgtcagtcaatctacctcaagacccagccatacctctgctgggaa
tatacgcaaaggtgttcttcctcctacaagggcacttgcttaactatgtt
tatagaagcaattcataatagtcagaaactagaaacaacctgtatgtcct
tcaaccacatttattttatccttacaatcaaaagataaagaaaattgtgg
tacatttaaaacatggaatataacttggctatttaaaaaataacatcatt
gaattttgaggcaagtggatggaactagaaaagaattatcttgattgtgt
taacctggacccaggaacataagcatggtatgtactcatttgtaagtgga
catttgctatgaagtaaaggataatcatgctacatcccacagacccagaa
agaatatgtaacaagaagagctcaagtgggtatgcaaggatagccctggg
aaggggaaatagaatagattttatgatttgatgtgtggactgaatgtgag
tggggacaagaacaggaggggaagggagatagagggagaaaataattaaa
taaataaaggaagcaagcagcccctcgggcctacagtcttagggcaaaat
acattaaggactttcaaggacaagttaaactaatgctccctaagttatcc
cccaaaatgaggaatgggagagggacattatttcatgatggccatatcca
ccgatgatactcaaagacattattaaatgttaaaaaataccgggctctcc
tctattgaaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_78379454_78380640
seq2: B6Ng01-273D18.b_40_1224

seq1  GAATTCAAAGCCAGGCACTAGAATTAGAGTTAACAGACATACATCCCTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGCCAGGCACTAGAATTAGAGTTAACAGACATACATCCCTAG  50

seq1  AATATAAAGTCAAATTTGGATTAAGTTCAATTGAAGAAATCACTATTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAAAGTCAAATTTGGATTAAGTTCAATTGAAGAAATCACTATTGAA  100

seq1  ATTTCTTACGGACACTTTAATCTTCTTCTAAATTAAATCAGTCATTCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTACGGACACTTTAATCTTCTTCTAAATTAAATCAGTCATTCATG  150

seq1  AGGGGAAACCTCTGAGACAGCAGTCGCATCTGGTCGGTAGGCAGGGCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAAACCTCTGAGACAGCAGTCGCATCTGGTCGGTAGGCAGGGCTCA  200

seq1  CGACTTACAAAGTGCGGTTTGTTTTACCGAAATACGCTGTCTTCCAAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACTTACAAAGTGCGGTTTGTTTTACCGAAATACGCTGTCTTCCAAACT  250

seq1  AGCTAATTTTCTTTTAGTCTAGATTTAGAAATATAAATTTAATGTTTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAATTTTCTTTTAGTCTAGATTTAGAAATATAAATTTAATGTTTTTT  300

seq1  AATAATTTGCATAAAATATTTAGTCCATACATATTTTGGATCATTTATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTTGCATAAAATATTTAGTCCATACATATTTTGGATCATTTATTA  350

seq1  TTTATGTATTTATAGACACAAAACCCTTTCATATGTTGGGTAAATGTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTATTTATAGACACAAAACCCTTTCATATGTTGGGTAAATGTTCT  400

seq1  GCCACTGGGCTACGTTGCCAACCCTAACTTGTGGGTTTGTAATGCAGTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTGGGCTACGTTGCCAACCCTAACTTGTGGGTTTGTAATGCAGTCA  450

seq1  ACTTTAAAACTGTTACCAAATAGGATTAGCTTAACTTTCCTGAGTCATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAAAACTGTTACCAAATAGGATTAGCTTAACTTTCCTGAGTCATGA  500

seq1  GGAAAAAATTTCCCCAAGATATGTCAAATTTGACTGGCTAACCCAGACTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAATTTCCCCAAGATATGTCAAATTTGACTGGCTAACCCAGACTC  550

seq1  TAATTATAGCAGCACAGAAACTTACTTTGCATCTACACGTGAAATCCATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATAGCAGCACAGAAACTTACTTTGCATCTACACGTGAAATCCATG  600

seq1  AATTCAGAAAGGTCAAAGACTCGAGGCTCACTTATAAGCATTCATTTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAGAAAGGTCAAAGACTCGAGGCTCACTTATAAGCATTCATTTTTA  650

seq1  CCATTACCAGCATATAAGCAGATAGAATGTCTCTTTTCTCTATTCTGCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTACCAGCATATAAGCAGATAGAATGTCTCTTTTCTCTATTCTGCTC  700

seq1  TTACTGTCAAGCCACAAATCCAGCCATGCCAAAGTACTTCCAGATTCCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGTCAAGCCACAAATCCAGCCATGCCAAAGTACTTCCAGATTCCCC  750

seq1  GAAGGACTTGCTGGCTCCTTTCCCAACACTAACTTTCCCATGGCTTTGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGACTTGCTGGCTCCTTTCCCAACACTAACTTTCCCATGGCTTTGCT  800

seq1  ACTTAGAATGGTCTTTGTTTTCTTCTTACATCAGGCCTCCGAGTATTTCA  850
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ACTTAGAATGGTCTTTGTTTTCTTCTTACATCACGCCTCCGAGTATTTCA  850

seq1  AGGACATT-GGCTGTGTCCTCTACAGAGATTCCTCCCTGAGTCCTCTGGT  899
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AGGACATTGGGCTGTGTCCTCTACAGAGATTCCTCCCTGAGTCCTCTGGT  900

seq1  GTGTGTAGGTGACATCTTTCCCCTCTCTCAGGACCCTACAGCTCTCACCA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTAGGTGACATCTTTCCCCTCTCTCAGGACCCTACAGCTCTCACCA  950

seq1  TCCTGGACCTGAGTGATTTATTTCTTGTCTGCTT-GGGAGCAGGGACTGT  998
      |||||||||||||||||||||||||||||||||| ||||||| |||||||
seq2  TCCTGGACCTGAGTGATTTATTTCTTGTCTGCTTGGGGAGCA-GGACTGT  999

seq1  GTCATTTATCTCACCTTTGGTGGCATGCAGTGATTAATCAGTGAATGTTT  1048
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GTCATTTATCTCACCTTTGGTGGCATGCAGTGATT-ATCAGTGAATGTTT  1048

seq1  ACTGAAGGGATGG-ATACCTTTTCACTTGAAAGCTACTCTTGGCTTTCAT  1097
      |||||| |||||| ||||||||||||||| |||||||||||||| |||||
seq2  ACTGAAAGGATGGAATACCTTTTCACTTG-AAGCTACTCTTGGC-TTCAT  1096

seq1  TTTATTCGGAGTTGATTTTATCAACACGAATGGGATAAATGGTTACTC-T  1146
      ||||||||||| ||||||||||| ||||||| |||| ||||||||||| |
seq2  TTTATTCGGAG-TGATTTTATCACCACGAAT-GGAT-AATGGTTACTCTT  1143

seq1  CACCTTTTCACAGCTGGAAAGCTT-ACTGGGG-ACAT-GGACAA  1187
      ||||||||||||||||  |||||| ||||||| |||| ||||||
seq2  CACCTTTTCACAGCTG--AAGCTTAACTGGGGAACATGGGACAA  1185


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