BAC Information

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BAC

Clone NameB6Ng01-273H08
Chromosome2 (Build37)
Map Location 132,277,666 - 132,409,260
singlet/doubletdoublet
Overlap gene1700026D11Rik, Prei4, LOC100043781
Upstream geneSmox, Adra1d, Lamr1-ps1, Prnp, Prnd, Rassf2, Slc23a2, LOC626513, LOC100043470, EG329521, 5730494N06Rik, Pcna, Cds2, Prokr2
Downstream geneLOC383801, LOC668906, Chgb, 3300001M20Rik, Mcm8, Crls1, B430119L13Rik, 5830467P10Rik, LOC668908, LOC100043785, A430048G15Rik, Bmp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273H08.bB6Ng01-273H08.g
ACCGA075027GA075028
length1,1181,107
definitionB6Ng01-273H08.b B6Ng01-273H08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(132,408,145 - 132,409,260)(132,277,666 - 132,278,760)
sequence
gaattcattggtaaaattgataaatcctaagaggtttggataattcccac
tctgttgtctgcagcaggaaaatgcaaaaagaaacagaacagatgtgctc
ccgaagtctaaagggtccggttccctttaattcttccagtacaaggacaa
gcaggaatttgtttctgtagcttagaagtcaagcttagactggagaggtc
aagcaggaaatacattagggcagttggcaagttcacacagcatagtggag
gtctgtgttaagtggagccatgcatttacagatatacacacacacagaga
ttttaatttttttcctgagacaagatctcctataacctgcattggcctca
aacaccttcataaccaagaatggccttgaatttctgattctcggccacca
cctctcaagtgctaggattacagatgtgtgccactatttctgatcaaagc
tagaatggaccagagcaagccttttaatctctgcactgatgggagagagg
caagtgactcaccatgagttccagtccagtctgctctacatagcaagttc
tgggttagtcaaggttcctagtgagaccctgtctcaagggactaacaaag
aaaaagagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaa
aggaaggaagaaagaaagaaagaaagaaagagaaaaaagagggaagaaag
acagacagtagatcaagtcaccattactttaacattaataataaataata
aaatgacagcccgaattgacacagaacacttctgagctttttactgttct
ctgtacgtgtgtttatagctgctatgtaccagacatgatactgggtatga
tggtacatgccctgggtcctgctctggcagactgactctaggagggccca
gctgcagacacgacagataaacacctgccctgtcatctcctcactcccat
ctatgtttttataaggtaaaatataaaggagggggtggtggaatctgcaa
ggtcagagtagaacgagtgcagaaacaagcctctatcttctcatcaaaag
catgcaacaatatttatgcaccatgtttgccaagaagttctgcctccgga
gttcagtccagcttgctt
gaattctctctattgatcttttttttctttctttctttctactttcaggg
ttgcaggctgagctggctggtgacatggagaaagagacagcagaacaatg
gcgtagcagctgaggtgtcggcaggatgagctgtgaaagggataaggcag
cctgttgtttgatggcggaagaaagagcaactgaacagtttgagagcagc
cagggagggaaggaaggtcgtggaagtagaaaggtactaagagagctgag
gcaaatggacaaaggatacaaagagccagagaaaaagaaaccgcaggcct
tgatcctaaaagagttccagagagttctcaggtcttttgggacaagggtc
tcagacaccccaggacaagagctagctgctgtcaagaaccgaggagtccc
tgctacccaagtctgcccagaaatctgctgaagaacctgtggggctacag
gtttgggtatctgaggcttgcatgtgaactgtagcaatagaggaccctgc
ctgctgtggctcccactggcctatgcagtcattcactaaagccaaacact
aaaggaaacaagcagacaaggacccgtgctggaagtgtgtctccttaccg
tcacatgattctgtctgggtctaggacatcagattggaagcacacataca
ttcaacatctcttctgatacctaaggcaatcccttaatttgtatcctcct
ctttctgtctgtctctctttctttctttctgccaaatattgcggcgtatg
attgtaaaaccacacttggaagacagaggcagaagagtgaggctctcaaa
gtcagtatcagctaaataactaattccataccgactgggggtgacatgag
accatgtcgcaaaacaacagcaatttaatactttttagttaaaaactgga
agtgttacatgcttcccagtgacaaggtacacgggtaaacgatcctcatt
tccaaactggagggaatgaaagcacatgagtgaactaatctgacctaagc
gagccagaaacccagcccaggcaaatcactaagcctgcagcttccaggtt
ggaagctgactgtgtgtcatgcagtgcctgtgactgtacagcctccggga
atgacct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_132408145_132409260
seq2: B6Ng01-273H08.b_47_1164 (reverse)

seq1  AAGCAAGCTGGGACTGGACTCGGGGAGGCAGGACTTCTTGGCAGACATGG  50
      ||||||||| |||||| ||||  |||||||| ||||||||||| ||||||
seq2  AAGCAAGCT-GGACTGAACTC-CGGAGGCAGAACTTCTTGGCAAACATGG  48

seq1  TGCATTAATTATG-TGCATGCTTTTGATGAGAAGATTAGAGGCCTTGTTT  99
      ||||| |||  || ||||||||||||||||||||| |||||| |||||||
seq2  TGCATAAATATTGTTGCATGCTTTTGATGAGAAGA-TAGAGG-CTTGTTT  96

seq1  CTGCACTCTGTCTACTCCTGA-CTTGCAGATT-CAC--ACCCCTCCTTTA  145
      ||||||||  |||||| |||| |||||||||| |||   |||||||||||
seq2  CTGCACTCGTTCTACT-CTGACCTTGCAGATTCCACCACCCCCTCCTTTA  145

seq1  TTATTTTACC-TAT-AAAACATAGATGGGAGTGA-GAGATGACAGGGCAG  192
       ||||||||| ||| ||||||||||||||||||| |||||||||||||||
seq2  -TATTTTACCTTATAAAAACATAGATGGGAGTGAGGAGATGACAGGGCAG  194

seq1  GTGTTTATCTGTCGTGTCTGCAGCTGGGCCCTCCTAGAGTCAGTCTGCCA  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTATCTGTCGTGTCTGCAGCTGGGCCCTCCTAGAGTCAGTCTGCCA  244

seq1  GAGCAGGACCCAGGGCATGTACCATCATACCCAGTATCATGTCTGGTACA  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGGACCCAGGGCATGTACCATCATACCCAGTATCATGTCTGGTACA  294

seq1  TAGCAGCTATAAACACACGTACAGAGAACAGTAAAAAGCTCAGAAGTGTT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGCTATAAACACACGTACAGAGAACAGTAAAAAGCTCAGAAGTGTT  344

seq1  CTGTGTCAATTCGGGCTGTCATTTTATTATTTATTATTAATGTTAAAGTA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTCAATTCGGGCTGTCATTTTATTATTTATTATTAATGTTAAAGTA  394

seq1  ATGGTGACTTGATCTACTGTCTGTCTTTCTTCCCTCTTTTTTCTCTTTCT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGACTTGATCTACTGTCTGTCTTTCTTCCCTCTTTTTTCTCTTTCT  444

seq1  TTCTTTCTTTCTTTCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTTCTTTCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTT  494

seq1  CTTTCTTTCTTTCTTTCTCTTTTTCTTTGTTAGTCCCTTGAGACAGGGTC  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTCTTTCTTTCTCTTTTTCTTTGTTAGTCCCTTGAGACAGGGTC  544

seq1  TCACTAGGAACCTTGACTAACCCAGAACTTGCTATGTAGAGCAGACTGGA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTAGGAACCTTGACTAACCCAGAACTTGCTATGTAGAGCAGACTGGA  594

seq1  CTGGAACTCATGGTGAGTCACTTGCCTCTCTCCCATCAGTGCAGAGATTA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAACTCATGGTGAGTCACTTGCCTCTCTCCCATCAGTGCAGAGATTA  644

seq1  AAAGGCTTGCTCTGGTCCATTCTAGCTTTGATCAGAAATAGTGGCACACA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCTTGCTCTGGTCCATTCTAGCTTTGATCAGAAATAGTGGCACACA  694

seq1  TCTGTAATCCTAGCACTTGAGAGGTGGTGGCCGAGAATCAGAAATTCAAG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAATCCTAGCACTTGAGAGGTGGTGGCCGAGAATCAGAAATTCAAG  744

seq1  GCCATTCTTGGTTATGAAGGTGTTTGAGGCCAATGCAGGTTATAGGAGAT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTCTTGGTTATGAAGGTGTTTGAGGCCAATGCAGGTTATAGGAGAT  794

seq1  CTTGTCTCAGGAAAAAAATTAAAATCTCTGTGTGTGTGTATATCTGTAAA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCTCAGGAAAAAAATTAAAATCTCTGTGTGTGTGTATATCTGTAAA  844

seq1  TGCATGGCTCCACTTAACACAGACCTCCACTATGCTGTGTGAACTTGCCA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGGCTCCACTTAACACAGACCTCCACTATGCTGTGTGAACTTGCCA  894

seq1  ACTGCCCTAATGTATTTCCTGCTTGACCTCTCCAGTCTAAGCTTGACTTC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCCTAATGTATTTCCTGCTTGACCTCTCCAGTCTAAGCTTGACTTC  944

seq1  TAAGCTACAGAAACAAATTCCTGCTTGTCCTTGTACTGGAAGAATTAAAG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTACAGAAACAAATTCCTGCTTGTCCTTGTACTGGAAGAATTAAAG  994

seq1  GGAACCGGACCCTTTAGACTTCGGGAGCACATCTGTTCTGTTTCTTTTTG  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACCGGACCCTTTAGACTTCGGGAGCACATCTGTTCTGTTTCTTTTTG  1044

seq1  CATTTTCCTGCTGCAGACAACAGAGTGGGAATTATCCAAACCTCTTAGGA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCCTGCTGCAGACAACAGAGTGGGAATTATCCAAACCTCTTAGGA  1094

seq1  TTTATCAATTTTACCAATGAATTC  1116
      ||||||||||||||||||||||||
seq2  TTTATCAATTTTACCAATGAATTC  1118

seq1: chr2_132277666_132278760
seq2: B6Ng01-273H08.g_66_1172

seq1  GAATTCTCTCTATTGATCTTTTTTTTCTTTCTTTCTTTCTACTTTCAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTATTGATCTTTTTTTTCTTTCTTTCTTTCTACTTTCAGGG  50

seq1  TTGCAGGCTGAGCTGGCTGGTGACATGGAGAAAGAGACAGCAGAACAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGGCTGAGCTGGCTGGTGACATGGAGAAAGAGACAGCAGAACAATG  100

seq1  GCGTAGCAGCTGAGGTGTCGGCAGGATGAGCTGTGAAAGGGATAAGGCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTAGCAGCTGAGGTGTCGGCAGGATGAGCTGTGAAAGGGATAAGGCAG  150

seq1  CCTGTTGTTTGATGGCGGAAGAAAGAGCAACTGAACAGTTTGAGAGCAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTGTTTGATGGCGGAAGAAAGAGCAACTGAACAGTTTGAGAGCAGC  200

seq1  CAGGGAGGGAAGGAAGGTCGTGGAAGTAGAAAGGTACTAAGAGAGCTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAGGGAAGGAAGGTCGTGGAAGTAGAAAGGTACTAAGAGAGCTGAG  250

seq1  GCAAATGGACAAAGGATACAAAGAGCCAGAGAAAAAGAAACCGCAGGCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATGGACAAAGGATACAAAGAGCCAGAGAAAAAGAAACCGCAGGCCT  300

seq1  TGATCCTAAAAGAGTTCCAGAGAGTTCTCAGGTCTTTTGGGACAAGGGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCTAAAAGAGTTCCAGAGAGTTCTCAGGTCTTTTGGGACAAGGGTC  350

seq1  TCAGACACCCCAGGACAAGAGCTAGCTGCTGTCAAGAACCGAGGAGTCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACACCCCAGGACAAGAGCTAGCTGCTGTCAAGAACCGAGGAGTCCC  400

seq1  TGCTACCCAAGTCTGCCCAGAAATCTGCTGAAGAACCTGTGGGGCTACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACCCAAGTCTGCCCAGAAATCTGCTGAAGAACCTGTGGGGCTACAG  450

seq1  GTTTGGGTATCTGAGGCTTGCATGTGAACTGTAGCAATAGAGGACCCTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGGTATCTGAGGCTTGCATGTGAACTGTAGCAATAGAGGACCCTGC  500

seq1  CTGCTGTGGCTCCCACTGGCCTATGCAGTCATTCACTAAAGCCAAACACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGTGGCTCCCACTGGCCTATGCAGTCATTCACTAAAGCCAAACACT  550

seq1  AAAGGAAACAAGCAGACAAGGACCCGTGCTGGAAGTGTGTCTCCTTACCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAACAAGCAGACAAGGACCCGTGCTGGAAGTGTGTCTCCTTACCG  600

seq1  TCACATGATTCTGTCTGGGTCTAGGACATCAGATTGGAAGCACACATACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATGATTCTGTCTGGGTCTAGGACATCAGATTGGAAGCACACATACA  650

seq1  TTCAACATCTCTTCTGATACCTAAGGCAATCCCTTAATTTGTATCCTCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACATCTCTTCTGATACCTAAGGCAATCCCTTAATTTGTATCCTCCT  700

seq1  CTTTCTGTCTGTCTCTCTTTCTTTCTTTCTGCCAAATATTGCGGCGTATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGTCTGTCTCTCTTTCTTTCTTTCTGCCAAATATTGCGGCGTATG  750

seq1  ATTGTAAAACCACACTTGGAAGACAGAGGCAGAAGAGTGAGGCTCTCAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAAAACCACACTTGGAAGACAGAGGCAGAAGAGTGAGGCTCTCAAA  800

seq1  GTCAGTATCAGCTAAATAACTAATTCCATACCGACT-GGGGTGACATGAG  849
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GTCAGTATCAGCTAAATAACTAATTCCATACCGACTGGGGGTGACATGAG  850

seq1  ACCATGTCGCAAAACAACAGCAA-TTAATAC-TTTTAGTTAAAAACTGGA  897
      ||||||||||||||||||||||| ||||||| ||||||||||||||||||
seq2  ACCATGTCGCAAAACAACAGCAATTTAATACTTTTTAGTTAAAAACTGGA  900

seq1  AGTGTTACATGCTT-CCAGTGACAAGGTACAC-GGTAAACGAT-CTCA-T  943
      |||||||||||||| ||||||||||||||||| |||||||||| |||| |
seq2  AGTGTTACATGCTTCCCAGTGACAAGGTACACGGGTAAACGATCCTCATT  950

seq1  TCCAAACTGGA-GGAATGAAAGCACATGAGTGAACT-ATCTGACCAAAGC  991
      ||||||||||| |||||||||||||||||||||||| |||||||| ||||
seq2  TCCAAACTGGAGGGAATGAAAGCACATGAGTGAACTAATCTGACCTAAGC  1000

seq1  GAGCCAGAAACCCAG-CCAGGCAAATCACTAAGCCTGCAGC-TCCAGGT-  1038
      ||||||||||||||| ||||||||||||||||||||||||| ||||||| 
seq2  GAGCCAGAAACCCAGCCCAGGCAAATCACTAAGCCTGCAGCTTCCAGGTT  1050

seq1  -GGAGCTGGACTTGTGGTGTCATGCAGTG-CTGTGACTGTACAG-CTCCG  1085
       | |||| ||| ||| ||||||||||||| |||||||||||||| |||||
seq2  GGAAGCT-GAC-TGT-GTGTCATGCAGTGCCTGTGACTGTACAGCCTCCG  1097

seq1  GGATTGACCT  1095
      ||| ||||||
seq2  GGAATGACCT  1107