BAC Information

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BAC

Clone NameB6Ng01-274A19
Chromosome2 (Build37)
Map Location 67,716,400 - 67,829,614
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100039540, Gm1322, Cmya3, LOC621171
Downstream geneLOC227995, B3galt1, Stk39, LOC100039683, Gm1323, 4933409G03Rik, 4932414N04Rik, LOC667443, Lass6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274A19.bB6Ng01-274A19.g
ACCGA075454GA075455
length1,079599
definitionB6Ng01-274A19.b B6Ng01-274A19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,828,534 - 67,829,614)(67,716,400 - 67,716,998)
sequence
gaattccctcctccagagacagttgggatattgttagagtgattgtttaa
aaatataaaaccatgcacaaatccagttacttgaatggagtgagatgctg
gcagcccaagcaaagcagaaagggaaataaaaatactgaatgtgttaaaa
atgagaagaggcagaaaaatggcagtcatgaatgatgtgtttgaagaaaa
gtgaaaagcaaacaaagatggatagcatacacacatacacacatacacaa
tacactctcacacacacatatattataaatgtatatgggcatacacatgc
gaaaaattataggaatgaaagacccagagaagatatgacttttagaaagt
cagctgactttgagcaagccctttatcttccaccttaaatcctctatttg
atttagcagatataaaatccaggaatgatcttggagaaatggattgctag
attgttacaaagttactttaaaagagaactgctcagagtctattctctgt
tccttctgatccacatctgagaactttaaaaaacatgaccccatagctac
agagatgttctttacgtctttgtgtgcctccggtaaaatggattatgatc
gtgatttctcagccaaagagtcacatggtgtgtagagctcttcctcattc
atattttgctgtctgaggaaatgttcctaggcatgcagggcatgttcaca
gcaactgaaaaattgttcttgccttagagcaataatgggctggaactgga
aagaaattactttaacttcaagttacagtagcagccacaaggaacaaact
tataaactgcaaggaaatgagatcaaagaccaccactgttttttaagaaa
ttgtacatcaccgttaggatccatagtctctggaccaacgtatgtttgct
tcctgattaatttattctacaaatctgactagggagtatcttctagacat
tgcctggactagattttctgactctctatagcaactgacaattcacagaa
acagaaacatgactctgggatatcaggaaacactttttgttcattgcagc
tttgtaatggggggagggtggctgcctgc

gaattccatccatgagcattttttatcaggaatggttcattggacatgag
agatgtactatattaactcataacattttagcaaagatgaatcatgaagt
aagtgaggctactgcatggcactatttaaataaggagagttattagttac
tgctttcagaccaccagtgaaagagagtaaacttttcaggaagtatgcaa
ggggaagactcatttgtgctaacattttaaggacccccttagacaagtta
aattcattatgctaagcagagaacttctccaacaaaaccgtagaccatac
agtgatcacagtatcttgaaagacaatgagggccgaaacttggtaaaatc
aaaaatgagttgggataaaagtacccacctcaccaagttcattttcccag
gtcttccaaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgctgctaaagtt
tcagagtttagatatgtacatgtgacagtgtatgcatggaacatacaaga
gagaacaactgtgcttcagtcttctcattccaccttgtttaacgccaggg
ccaagaagtgggagtggatgggtaggggagcagggctgggggagggtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_67828534_67829614
seq2: B6Ng01-274A19.b_30_1108 (reverse)

seq1  GCAGGCAGCCACCCT-CCCCCATTACAAAGGCTGGCAATTGAAC-AAAAG  48
      ||||||||||||||| ||||||||||||| ||| |||| ||||| |||||
seq2  GCAGGCAGCCACCCTCCCCCCATTACAAA-GCT-GCAA-TGAACAAAAAG  47

seq1  TGTTTCCTGATATCCCAGAGTCATGTTTCTGTTTCTGTGAATTGTCAGTT  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCCTGATATCCCAGAGTCATGTTTCTGTTTCTGTGAATTGTCAGTT  97

seq1  GCTATAGAGAGTCAGAAAATCTAGTCCAGGCAATGTTCTAGAAGATACTC  148
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GCTATAGAGAGTCAGAAAATCTAGTCCAGGCAATG-TCTAGAAGATACTC  146

seq1  CCTAGTCAGATTTGTAGAATAAATTAATCAGGAAGCAAACATACGTTGGT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTCAGATTTGTAGAATAAATTAATCAGGAAGCAAACATACGTTGGT  196

seq1  CCAGAGACTATGGATCCTAACGGTGATGTACAATTTCTTAAAAAACAGTG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGACTATGGATCCTAACGGTGATGTACAATTTCTTAAAAAACAGTG  246

seq1  GTGGTCTTTGATCTCATTTCCTTGCAGTTTATAAGTTTGTTCCTTGTGGC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCTTTGATCTCATTTCCTTGCAGTTTATAAGTTTGTTCCTTGTGGC  296

seq1  TGCTACTGTAACTTGAAGTTAAAGTAATTTCTTTCCAGTTCCAGCCCATT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACTGTAACTTGAAGTTAAAGTAATTTCTTTCCAGTTCCAGCCCATT  346

seq1  ATTGCTCTAAGGCAAGAACAATTTTTCAGTTGCTGTGAACATGCCCTGCA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTCTAAGGCAAGAACAATTTTTCAGTTGCTGTGAACATGCCCTGCA  396

seq1  TGCCTAGGAACATTTCCTCAGACAGCAAAATATGAATGAGGAAGAGCTCT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTAGGAACATTTCCTCAGACAGCAAAATATGAATGAGGAAGAGCTCT  446

seq1  ACACACCATGTGACTCTTTGGCTGAGAAATCACGATCATAATCCATTTTA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACCATGTGACTCTTTGGCTGAGAAATCACGATCATAATCCATTTTA  496

seq1  CCGGAGGCACACAAAGACGTAAAGAACATCTCTGTAGCTATGGGGTCATG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGAGGCACACAAAGACGTAAAGAACATCTCTGTAGCTATGGGGTCATG  546

seq1  TTTTTTAAAGTTCTCAGATGTGGATCAGAAGGAACAGAGAATAGACTCTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAAAGTTCTCAGATGTGGATCAGAAGGAACAGAGAATAGACTCTG  596

seq1  AGCAGTTCTCTTTTAAAGTAACTTTGTAACAATCTAGCAATCCATTTCTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTTCTCTTTTAAAGTAACTTTGTAACAATCTAGCAATCCATTTCTC  646

seq1  CAAGATCATTCCTGGATTTTATATCTGCTAAATCAAATAGAGGATTTAAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATCATTCCTGGATTTTATATCTGCTAAATCAAATAGAGGATTTAAG  696

seq1  GTGGAAGATAAAGGGCTTGCTCAAAGTCAGCTGACTTTCTAAAAGTCATA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAGATAAAGGGCTTGCTCAAAGTCAGCTGACTTTCTAAAAGTCATA  746

seq1  TCTTCTCTGGGTCTTTCATTCCTATAATTTTTCGCATGTGTATGCCCATA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCTGGGTCTTTCATTCCTATAATTTTTCGCATGTGTATGCCCATA  796

seq1  TACATTTATAATATATGTGTGTGTGAGAGTGTATTGTGTATGTGTGTATG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTATAATATATGTGTGTGTGAGAGTGTATTGTGTATGTGTGTATG  846

seq1  TGTGTATGCTATCCATCTTTGTTTGCTTTTCACTTTTCTTCAAACACATC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATGCTATCCATCTTTGTTTGCTTTTCACTTTTCTTCAAACACATC  896

seq1  ATTCATGACTGCCATTTTTCTGCCTCTTCTCATTTTTAACACATTCAGTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATGACTGCCATTTTTCTGCCTCTTCTCATTTTTAACACATTCAGTA  946

seq1  TTTTTATTTCCCTTTCTGCTTTGCTTGGGCTGCCAGCATCTCACTCCATT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATTTCCCTTTCTGCTTTGCTTGGGCTGCCAGCATCTCACTCCATT  996

seq1  CAAGTAACTGGATTTGTGCATGGTTTTATATTTTTAAACAATCACTCTAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTAACTGGATTTGTGCATGGTTTTATATTTTTAAACAATCACTCTAA  1046

seq1  CAATATCCCAACTGTCTCTGGAGGAGGGAATTC  1081
      |||||||||||||||||||||||||||||||||
seq2  CAATATCCCAACTGTCTCTGGAGGAGGGAATTC  1079


seq1: chr2_67716400_67716998
seq2: B6Ng01-274A19.g_66_664

seq1  GAATTCCATCCATGAGCATTTTTTATCAGGAATGGTTCATTGGACATGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCCATGAGCATTTTTTATCAGGAATGGTTCATTGGACATGAG  50

seq1  AGATGTACTATATTAACTCATAACATTTTAGCAAAGATGAATCATGAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTACTATATTAACTCATAACATTTTAGCAAAGATGAATCATGAAGT  100

seq1  AAGTGAGGCTACTGCATGGCACTATTTAAATAAGGAGAGTTATTAGTTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAGGCTACTGCATGGCACTATTTAAATAAGGAGAGTTATTAGTTAC  150

seq1  TGCTTTCAGACCACCAGTGAAAGAGAGTAAACTTTTCAGGAAGTATGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTCAGACCACCAGTGAAAGAGAGTAAACTTTTCAGGAAGTATGCAA  200

seq1  GGGGAAGACTCATTTGTGCTAACATTTTAAGGACCCCCTTAGACAAGTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAGACTCATTTGTGCTAACATTTTAAGGACCCCCTTAGACAAGTTA  250

seq1  AATTCATTATGCTAAGCAGAGAACTTCTCCAACAAAACCGTAGACCATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATTATGCTAAGCAGAGAACTTCTCCAACAAAACCGTAGACCATAC  300

seq1  AGTGATCACAGTATCTTGAAAGACAATGAGGGCCGAAACTTGGTAAAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATCACAGTATCTTGAAAGACAATGAGGGCCGAAACTTGGTAAAATC  350

seq1  AAAAATGAGTTGGGATAAAAGTACCCACCTCACCAAGTTCATTTTCCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGAGTTGGGATAAAAGTACCCACCTCACCAAGTTCATTTTCCCAG  400

seq1  GTCTTCCAAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGCTAAAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCCAAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGCTAAAGTT  450

seq1  TCAGAGTTTAGATATGTACATGTGACAGTGTATGCATGGAACATACAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGTTTAGATATGTACATGTGACAGTGTATGCATGGAACATACAAGA  500

seq1  GAGAACAACTGTGCTTCAGTCTTCTCATTCCACCTTGTTTAACGCCAGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACAACTGTGCTTCAGTCTTCTCATTCCACCTTGTTTAACGCCAGGG  550

seq1  CCAAGAAGTGGGAGTGGATGGGTAGGGGAGCAGGGCTGGGGGAGGGTAT  599
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAAGTGGGAGTGGATGGGTAGGGGAGCAGGGCTGGGGGAGGGTAT  599


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