BAC Information

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BAC

Clone NameB6Ng01-274B02
Chromosome2 (Build37)
Map Location 24,893,069 - 25,018,559
singlet/doubletdoublet
Overlap genePnpla7, Nelf, Entpd8, Noxa1
Upstream geneHnmt, Tbpl2, Il1f8, LOC215253, Il1f9, Il1f6, LOC620156, Il1f5, Il1f10, Il1rn, Psd4, Pax8, LOC433410, LOC664938, Cacna1b, Ehmt1, Arrdc1, Zmynd19, Wdr85, Mrpl41
Downstream geneNrarp, A830007P12Rik, A730008L03Rik, 4933433C11Rik, BC061039, Tubb2c, Slc34a3, Gm757, 2310002J15Rik, Rnf208, LOC100039232, Ndor1, C730025P13Rik, C430004E15Rik, Ssna1, Anapc2, 4930571C24Rik, BC004853, Grin1, Man1b1, Dpp7, Uap1l1, 2010317E24Rik, Entpd2, Npdc1, Fut7, Abca2, Clic3, BC029214, Ptgds, EG665070, Lcn12, C8g, Fbxw5, Traf2, Edf1, Mamdc4, Phpt1, Gm996, LOC100039887, B230208H17Rik, 4921530D09Rik, Tmem141, Fcna, Lcn8, Lcn5, LOC620709, Lcn10, Lcn13, Bmyc, LOC383678, Lcn3, Lcn11, LOC620858, Glt6d1, Lcn9, Sohlh1, Kcnt1, Camsap1, LOC100040100, LOC665199, Ubadc1, Btbd14a, C330006A16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274B02.bB6Ng01-274B02.g
ACCGA075468GA075469
length4791,099
definitionB6Ng01-274B02.b B6Ng01-274B02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(24,893,069 - 24,893,553)(25,017,465 - 25,018,559)
sequence
acttacctctgcctccccagtgttgggattaaagacaagtgccaccacag
ggtctcacgttgtatctctggctggcctggaactcccagaggtccacctc
cctctgcaagcaggtgccaccatgcctagctgcatttgtacagtttaact
tggaattgtgatagttacatcctagtagtcttcacgactgtaaagatccc
cttattctgtatgcctccaaggaacagctgctaatgaaaatttgatactg
ttgccagatgcagtggagtttgcttgtagtcccagcttctaaaaggcaga
gctgggtcaacttcttgaatttaggagttcaaggccagcttgagacactg
tttagagaaagggtggactcttataaattctctcttaattgcacactctt
agaagagcttgtttagaatgattttgttgttgttgttgttgttgtttgtt
tgtttgtttgttttcagggggtgggggtt
gaattcacatccaagaagccaattccagaccagcaggatcaggcccctta
catctgggaaccagaggatgcgcctcatcttccctccttcacaggtggga
agagtgctccagtatacatagtcaacagttgtgtgtgctggaggtcctcc
aggccctgagaacctgaagactttgcgccgcgttctcttggttcatccca
gaagcccctcaagggccagagtaaattccccaaaccagtggccatggggg
ccactaccttggtcatgctggcctagctgaaattctgtaaaaatactggc
ccaggctgtagtgacttccctgacatgcagcctgtgtgcaggtgtctagg
tggggatggaggatgacctgtggccactgctcccacgaacagaaactcag
agcacacatgcccaccaccatccagggaccaccatccagggacacaccgg
ttcctgccaacccgccagggtgtttcccacttggggggatgggcattcag
gacccacctggcagcggctgatgatacctgcatgaatgactcgtacactg
aagtgcctgagcatgcctttggcttgctgttgggccttgagggtactgtt
tacagagaggcagcgaccagccccaacttgggcacagagctgcagataca
tgaccagggactgctggggtgcatatatcccagaatctttcctggcttct
tctgggtctaccagggaagggcaagccctctctcatgaagagtgcctaag
ggaacccagtgggcctgaggtcccttggtagacagatggggcttagacgg
gaacaggtcccaactctatacttgtggtatggcatgatgaagaggccaaa
gatgatcctttctgtcccatctggccacctgtaataaccagcaggtaagg
ctgccccactgtccctctcacacactcaaggtgtctactttggtcaattg
gtatcaacctttggttccaccaaggcccgaaatcctggggcctgaagcac
atcttgttttacagataccacttaaagaacagtacgatattgtattttgg
gttacaacgaaattaaccttaaaaggcaatccccccaagacctggagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_24893069_24893553
seq2: B6Ng01-274B02.b_48_532

seq1  GAATTCACTTACCTCTGCCTCCCCAGTGTTGGGATTAAAGACAAGTGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTACCTCTGCCTCCCCAGTGTTGGGATTAAAGACAAGTGCCA  50

seq1  CCACAGGGTCTCACGTTGTATCTCTGGCTGGCCTGGAACTCCCAGAGGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGGGTCTCACGTTGTATCTCTGGCTGGCCTGGAACTCCCAGAGGTC  100

seq1  CACCTCCCTCTGCAAGCAGGTGCCACCATGCCTAGCTGCATTTGTACAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCCCTCTGCAAGCAGGTGCCACCATGCCTAGCTGCATTTGTACAGT  150

seq1  TTAACTTGGAATTGTGATAGTTACATCCTAGTAGTCTTCACGACTGTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTTGGAATTGTGATAGTTACATCCTAGTAGTCTTCACGACTGTAAA  200

seq1  GATCCCCTTATTCTGTATGCCTCCAAGGAACAGCTGCTAATGAAAATTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCCCTTATTCTGTATGCCTCCAAGGAACAGCTGCTAATGAAAATTTG  250

seq1  ATACTGTTGCCAGATGCAGTGGAGTTTGCTTGTAGTCCCAGCTTCTAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGTTGCCAGATGCAGTGGAGTTTGCTTGTAGTCCCAGCTTCTAAAA  300

seq1  GGCAGAGCTGGGTCAACTTCTTGAATTTAGGAGTTCAAGGCCAGCTTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGCTGGGTCAACTTCTTGAATTTAGGAGTTCAAGGCCAGCTTGAG  350

seq1  ACACTGTTTAGAGAAAGGGTGGACTCTTATAAATTCTCTCTTAATTGCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGTTTAGAGAAAGGGTGGACTCTTATAAATTCTCTCTTAATTGCAC  400

seq1  ACTCTTAGAAGAGCTTGTTTAGAATGATTTTGTTGTTGTTGTTGTTGTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTAGAAGAGCTTGTTTAGAATGATTTTGTTGTTGTTGTTGTTGTTG  450

seq1  TTTGTTTGTTTGTTTGTTTTCAGGGGGTGGGGGTT  485
      |||||||||||||||||||||||||||||||||||
seq2  TTTGTTTGTTTGTTTGTTTTCAGGGGGTGGGGGTT  485

seq1: chr2_25017465_25018559
seq2: B6Ng01-274B02.g_65_1163 (reverse)

seq1  TTCTTCAGGTCTTTGGGGGATTGCTTTTAAAGTTTAATTTTGTTTGTAAC  50
      |||| |||||||| |||||||||| ||| ||| ||||||| | |||||||
seq2  TTCTCCAGGTCTTGGGGGGATTGCCTTTTAAGGTTAATTTCG-TTGTAAC  49

seq1  C--AAATACAATATCTGTACTGTTCCTTAAGT-GTATCTGTAAAACAAGA  97
      |  |||||||||||| ||||||||| |||||| |||||||||||||||||
seq2  CCAAAATACAATATC-GTACTGTTCTTTAAGTGGTATCTGTAAAACAAGA  98

seq1  TGTGCTTCAGGCCCCAGGA-TTCGGGCCTTGGTGGGAACAAAGGTTGATA  146
      ||||||||||||||||||| ||||||||||||||| | ||||||||||||
seq2  TGTGCTTCAGGCCCCAGGATTTCGGGCCTTGGTGGAACCAAAGGTTGATA  148

seq1  CCAATTGA-CAAAGTAGACAACCTTGAGTGTGTGAGAGGGACAGTGGGGC  195
      |||||||| |||||||||| ||||||||||||||||||||||||||||||
seq2  CCAATTGACCAAAGTAGAC-ACCTTGAGTGTGTGAGAGGGACAGTGGGGC  197

seq1  AGCCTTACCTGCTGG-TATTACAGGTGGCCAGATGGGACAG-AAGGATCA  243
      ||||||||||||||| ||||||||||||||||||||||||| ||||||||
seq2  AGCCTTACCTGCTGGTTATTACAGGTGGCCAGATGGGACAGAAAGGATCA  247

seq1  TCTTTGGCCTCTTCATCATGCCATACCACAAGTATAGAGTTGGGACCTGT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGGCCTCTTCATCATGCCATACCACAAGTATAGAGTTGGGACCTGT  297

seq1  TCCCGTCTAAGCCCCATCTGTCTACCAAGGGACCTCAGGCCCACTGGGTT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGTCTAAGCCCCATCTGTCTACCAAGGGACCTCAGGCCCACTGGGTT  347

seq1  CCCTTAGGCACTCTTCATGAGAGAGGGCTTGCCCTTCCCTGGTAGACCCA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTAGGCACTCTTCATGAGAGAGGGCTTGCCCTTCCCTGGTAGACCCA  397

seq1  GAAGAAGCCAGGAAAGATTCTGGGATATATGCACCCCAGCAGTCCCTGGT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGCCAGGAAAGATTCTGGGATATATGCACCCCAGCAGTCCCTGGT  447

seq1  CATGTATCTGCAGCTCTGTGCCCAAGTTGGGGCTGGTCGCTGCCTCTCTG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTATCTGCAGCTCTGTGCCCAAGTTGGGGCTGGTCGCTGCCTCTCTG  497

seq1  TAAACAGTACCCTCAAGGCCCAACAGCAAGCCAAAGGCATGCTCAGGCAC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAGTACCCTCAAGGCCCAACAGCAAGCCAAAGGCATGCTCAGGCAC  547

seq1  TTCAGTGTACGAGTCATTCATGCAGGTATCATCAGCCGCTGCCAGGTGGG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTGTACGAGTCATTCATGCAGGTATCATCAGCCGCTGCCAGGTGGG  597

seq1  TCCTGAATGCCCATCCCCCCAAGTGGGAAACACCCTGGCGGGTTGGCAGG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAATGCCCATCCCCCCAAGTGGGAAACACCCTGGCGGGTTGGCAGG  647

seq1  AACCGGTGTGTCCCTGGATGGTGGTCCCTGGATGGTGGTGGGCATGTGTG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCGGTGTGTCCCTGGATGGTGGTCCCTGGATGGTGGTGGGCATGTGTG  697

seq1  CTCTGAGTTTCTGTTCGTGGGAGCAGTGGCCACAGGTCATCCTCCATCCC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGTTTCTGTTCGTGGGAGCAGTGGCCACAGGTCATCCTCCATCCC  747

seq1  CACCTAGACACCTGCACACAGGCTGCATGTCAGGGAAGTCACTACAGCCT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTAGACACCTGCACACAGGCTGCATGTCAGGGAAGTCACTACAGCCT  797

seq1  GGGCCAGTATTTTTACAGAATTTCAGCTAGGCCAGCATGACCAAGGTAGT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCAGTATTTTTACAGAATTTCAGCTAGGCCAGCATGACCAAGGTAGT  847

seq1  GGCCCCCATGGCCACTGGTTTGGGGAATTTACTCTGGCCCTTGAGGGGCT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCCCATGGCCACTGGTTTGGGGAATTTACTCTGGCCCTTGAGGGGCT  897

seq1  TCTGGGATGAACCAAGAGAACGCGGCGCAAAGTCTTCAGGTTCTCAGGGC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGATGAACCAAGAGAACGCGGCGCAAAGTCTTCAGGTTCTCAGGGC  947

seq1  CTGGAGGACCTCCAGCACACACAACTGTTGACTATGTATACTGGAGCACT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGGACCTCCAGCACACACAACTGTTGACTATGTATACTGGAGCACT  997

seq1  CTTCCCACCTGTGAAGGAGGGAAGATGAGGCGCATCCTCTGGTTCCCAGA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCACCTGTGAAGGAGGGAAGATGAGGCGCATCCTCTGGTTCCCAGA  1047

seq1  TGTAAGGGGCCTGATCCTGCTGGTCTGGAATTGGCTTCTTGGATGTGAAT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGGGGCCTGATCCTGCTGGTCTGGAATTGGCTTCTTGGATGTGAAT  1097

seq1  TC  1095
      ||
seq2  TC  1099