BAC Information

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BAC

Clone NameB6Ng01-274E15
Chromosome2 (Build37)
Map Location 46,254,867 - 46,399,065
singlet/doubletdoublet
Overlap geneLOC383690
Upstream geneLOC100042661, LOC100041337, LOC666604
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274E15.bB6Ng01-274E15.g
ACCGA075629GA075630
length1,1651,077
definitionB6Ng01-274E15.b B6Ng01-274E15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(46,397,891 - 46,399,065)(46,254,867 - 46,255,939)
sequence
gaattcacactgcatgaaaggctcatgtaaaataaggtaggataaagtca
gaaccaggagtcactgtaagtcctagacctttcagtacactgctcattca
ctcagtgttctgtttggctagactctttctttcagtttcacatcacttcc
agcaaggtaagttaaataaattgtgattgtacagttataagattttaatg
gtaggatatgaaaaatcaattggccatgagaaaggagtttttaagggaaa
gcaatccattctggagccctctgaaatgaagtgggtaatagatgatcatt
tactcaacctgagaacaagttctgatctatatttaatatattcaatatac
tttcagaatagcattctaaatcttcttcatcttcatgtcactaagccaaa
ggcaatgcctgggctttaaaggaactacactataggattacatgctaacg
aattgttgactgtggtcatcacacaacagtttgaaattatgtgatattta
ggtgtttcttctccttacaaaaagtaaaaatgaatgaatgaatgaatgaa
tgaataaataaataaataaataaatacagtattttctcaatgctaaatag
taatagtgtgttagttatatggtctatgctttgatatcctgcttcagaac
taggaagcaacactaaatgcagctatgaaatatgagctagcaaactgaag
ctgacattattcaacataaaaaaaaccctacactgtccatttgtagaagt
acccctccccaagtagcaccacaagatgcatacgactttgaaacttaagg
aaccatttcttctcaagtcctctcaaacgtgacagtgatcagaaatataa
ataataaaaaataaagtataaaataaaggattagaatgagatggctatta
caagaatagtgtagccaaatttgttatggcaaggtctttaagaagtaaga
aatgtgttttaatacaaattttacactttgccatagctcccgggacagaa
aagagctgatgggctagactgactgtgccagctttcacttttcacagtag
cacctcagtacaaccccaaagcatccaatcctaatatttagtccatcagc
atataaacagctgatcatattcattcccagaagaacactttcacgttgat
tgaagtgtttgccat

gaattcagttggtagactgttttcctgaaatacatgaaaatctgggaact
ggtggggtggtgtatatctgtaattctaccagaacaggaagggaagcagg
aaactcagaaattcatgatcatcttgaaaatatatatatatttatattat
aaaaatatatatatatatttatattatataatatatatatatatataatt
tcaagcctcagatatgaaagaatatctctaaacaagaagtagaagaaaag
aaaataacaataatacatgataattgtatttaaaatttgttaagtgtaaa
gtgtatagtaagacagtaactggctcgttactcaagtttacctgagattt
gcatattttctggaaatgggtacttttatagtgtcaactacaatttcctt
gatacacatcagaattcgatattcattatatatttatttttaatagccca
agaaatgagaaaatgcaaggggaaaaaatgatccagtttttttatgaaat
cctaagttttttcagagagagagagagagagagagagagagagagagaga
gagagacctagagactcagttggatcatgtttagatgtatggtggattta
gtccacaatcatttgagtgttgaaccccaaatattcatttttcacacaag
acttgttaatggagtacattttcaaaacaaatgctgaattagatacaagc
acataatggtacaaaatttctgagaattgttagtatgtgaacatgtctaa
acatcaaaactgttagtaattatctagcatgaccctataataaacgcatg
tcctatgtttgtcccaccttgctaatttattttaagcatatggagattat
tagttcagtgggaggcaagaagtacctagttaagtcatggatttccagaa
atagaagccaattttgttttaaataaaaataaaagtaaacagacatcgag
cttaaatgatctagctaaatgtctgtgtgggaagttacaacatcttccac
actttctgcttctctctaatcacagcatagtcttcccgtgttcctgaaat
atccaattcacctgcaagtgcaaaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_46397891_46399065
seq2: B6Ng01-274E15.b_45_1209 (reverse)

seq1  ATGGCAAACATCTCATTCTCAGTGAAAGTG-TCTTCTTGGGAAATGAAAA  49
      ||||||||||  ||| ||   ||||||||| ||||||  || ||||  ||
seq2  ATGGCAAACACTTCAATCAACGTGAAAGTGTTCTTCT--GGGAATG--AA  46

seq1  TATGATCAGCTGTTTTATATGCTGAATGAAAATAAAAAATATAAGAAATT  99
      |||||||||||| ||||||||||||  |     |  |||||| ||  |||
seq2  TATGATCAGCTG-TTTATATGCTGATGG-----ACTAAATATTAG-GATT  89

seq1  GGATGCTTTGGGGTTGTACTGAGTGCCTACCTGTGGAAAAGTGAAGGCTG  149
      |||||||||||||||||||||||   ||| |||| |||||||||| ||||
seq2  GGATGCTTTGGGGTTGTACTGAGGTGCTA-CTGT-GAAAAGTGAAAGCTG  137

seq1  GCACAGTCAGTCTAGCCCATCAGCTCTTTCTTGT-CCGGGAGCTATGGCA  198
      |||||||||||||||||||||||||||||  ||| |||||||||||||||
seq2  GCACAGTCAGTCTAGCCCATCAGCTCTTTTCTGTCCCGGGAGCTATGGCA  187

seq1  AAGTGTAAAATTTGTATTAAAACACATTTCTTACTTCTTAAAGACCTTGC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTAAAATTTGTATTAAAACACATTTCTTACTTCTTAAAGACCTTGC  237

seq1  CATAAC-AATTTGGCTACACTATTCTTTGTAATAGCCATCTCATTCTAAT  297
      |||||| |||||||||||||||||| ||||||||||||||||||||||||
seq2  CATAACAAATTTGGCTACACTATTC-TTGTAATAGCCATCTCATTCTAAT  286

seq1  CC-TTATTTTATACCTTATTTTTTATTATTTATATTTCTGATCACTGTCA  346
      || ||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CCTTTATTTTATACTTTATTTTTTATTATTTATATTTCTGATCACTGTCA  336

seq1  CGTTTGAGAGGACTTGAGAAGAAATGGTTCCTTAAGTTTCAAAGTCGTAT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTGAGAGGACTTGAGAAGAAATGGTTCCTTAAGTTTCAAAGTCGTAT  386

seq1  GCATCTTGTGGTGCTACTTGGGGAGGGGTACTTCTACAAATGGACAGTGT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTTGTGGTGCTACTTGGGGAGGGGTACTTCTACAAATGGACAGTGT  436

seq1  AGGGTTTTTTTTATGTTGAATAATGTCAGCTTCAGTTTGCTAGCTCATAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTTTTTTTATGTTGAATAATGTCAGCTTCAGTTTGCTAGCTCATAT  486

seq1  TTCATAGCTGCATTTAGTGTTGCTTCCTAGTTCTGAAGCAGGATATCAAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAGCTGCATTTAGTGTTGCTTCCTAGTTCTGAAGCAGGATATCAAA  536

seq1  GCATAGACCATATAACTAACACACTATTACTATTTAGCATTGAGAAAATA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGACCATATAACTAACACACTATTACTATTTAGCATTGAGAAAATA  586

seq1  CTGTATTTATTTATTTATTTATTTATTCATTCATTCATTCATTCATTCAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATTTATTTATTTATTTATTTATTCATTCATTCATTCATTCATTCAT  636

seq1  TTTTACTTTTTGTAAGGAGAAGAAACACCTAAATATCACATAATTTCAAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACTTTTTGTAAGGAGAAGAAACACCTAAATATCACATAATTTCAAA  686

seq1  CTGTTGTGTGATGACCACAGTCAACAATTCGTTAGCATGTAATCCTATAG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGTGTGATGACCACAGTCAACAATTCGTTAGCATGTAATCCTATAG  736

seq1  TGTAGTTCCTTTAAAGCCCAGGCATTGCCTTTGGCTTAGTGACATGAAGA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTTCCTTTAAAGCCCAGGCATTGCCTTTGGCTTAGTGACATGAAGA  786

seq1  TGAAGAAGATTTAGAATGCTATTCTGAAAGTATATTGAATATATTAAATA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAAGATTTAGAATGCTATTCTGAAAGTATATTGAATATATTAAATA  836

seq1  TAGATCAGAACTTGTTCTCAGGTTGAGTAAATGATCATCTATTACCCACT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCAGAACTTGTTCTCAGGTTGAGTAAATGATCATCTATTACCCACT  886

seq1  TCATTTCAGAGGGCTCCAGAATGGATTGCTTTCCCTTAAAAACTCCTTTC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCAGAGGGCTCCAGAATGGATTGCTTTCCCTTAAAAACTCCTTTC  936

seq1  TCATGGCCAATTGATTTTTCATATCCTACCATTAAAATCTTATAACTGTA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGCCAATTGATTTTTCATATCCTACCATTAAAATCTTATAACTGTA  986

seq1  CAATCACAATTTATTTAACTTACCTTGCTGGAAGTGATGTGAAACTGAAA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCACAATTTATTTAACTTACCTTGCTGGAAGTGATGTGAAACTGAAA  1036

seq1  GAAAGAGTCTAGCCAAACAGAACACTGAGTGAATGAGCAGTGTACTGAAA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGTCTAGCCAAACAGAACACTGAGTGAATGAGCAGTGTACTGAAA  1086

seq1  GGTCTAGGACTTACAGTGACTCCTGGTTCTGACTTTATCCTACCTTATTT  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTAGGACTTACAGTGACTCCTGGTTCTGACTTTATCCTACCTTATTT  1136

seq1  TACATGAGCCTTTCATGCAGTGTGAATTC  1175
      |||||||||||||||||||||||||||||
seq2  TACATGAGCCTTTCATGCAGTGTGAATTC  1165


seq1: chr2_46254867_46255939
seq2: B6Ng01-274E15.g_66_1142

seq1  GAATTCAGTTGGTAGACTGTTTTCCTGAAATACATGAAAATCTGGGAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTGGTAGACTGTTTTCCTGAAATACATGAAAATCTGGGAACT  50

seq1  GGTGGGGTGGTGTATATCTGTAATTCTACCAGAACAGGAAGGGAAGCAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGGTGGTGTATATCTGTAATTCTACCAGAACAGGAAGGGAAGCAGG  100

seq1  AAACTCAGAAATTCATGATCATCTTGAAAATATATATATATTTATATTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCAGAAATTCATGATCATCTTGAAAATATATATATATTTATATTAT  150

seq1  AAAAATATATATATATATTTATATTATATAATATATATATATATATAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATATATATATATATTTATATTATATAATATATATATATATATAATT  200

seq1  TCAAGCCTCAGATATGAAAGAATATCTCTAAACAAGAAGTAGAAGAAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGCCTCAGATATGAAAGAATATCTCTAAACAAGAAGTAGAAGAAAAG  250

seq1  AAAATAACAATAATACATGATAATTGTATTTAAAATTTGTTAAGTGTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAACAATAATACATGATAATTGTATTTAAAATTTGTTAAGTGTAAA  300

seq1  GTGTATAGTAAGACAGTAACTGGCTCGTTACTCAAGTTTACCTGAGATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATAGTAAGACAGTAACTGGCTCGTTACTCAAGTTTACCTGAGATTT  350

seq1  GCATATTTTCTGGAAATGGGTACTTTTATAGTGTCAACTACAATTTCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATTTTCTGGAAATGGGTACTTTTATAGTGTCAACTACAATTTCCTT  400

seq1  GATACACATCAGAATTCGATATTCATTATATATTTATTTTTAATAGCCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACACATCAGAATTCGATATTCATTATATATTTATTTTTAATAGCCCA  450

seq1  AGAAATGAGAAAATGCAAGGGGAAAAAATGATCCAGTTTTTTTATGAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGAGAAAATGCAAGGGGAAAAAATGATCCAGTTTTTTTATGAAAT  500

seq1  CCTAAGTTTTTTCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAGTTTTTTCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  550

seq1  GAGAGACCTAGAGACTCAGTTGGATCATGTTTAGATGTATGGTGGATTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGACCTAGAGACTCAGTTGGATCATGTTTAGATGTATGGTGGATTTA  600

seq1  GTCCACAATCATTTGAGTGTTGAACCCCAAATATTCATTTTTCACACAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCACAATCATTTGAGTGTTGAACCCCAAATATTCATTTTTCACACAAG  650

seq1  ACTTGTTAATGGAGTACATTTTCAAAACAAATGCTGAATTAGATACAAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTTAATGGAGTACATTTTCAAAACAAATGCTGAATTAGATACAAGC  700

seq1  ACATAATGGTACAAAATTTCTGAGAATTGTTAGTATGTGAACATGTCTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAATGGTACAAAATTTCTGAGAATTGTTAGTATGTGAACATGTCTAA  750

seq1  ACATCAAAACTGTTAGTAATTATCTAGCATGACCCTATAATAAACGCATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAAAACTGTTAGTAATTATCTAGCATGACCCTATAATAAACGCATG  800

seq1  TCCTATGTTTGTCCCACCTTGCTAATTTATTTTAAGCATATGGAGA-TAT  849
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TCCTATGTTTGTCCCACCTTGCTAATTTATTTTAAGCATATGGAGATTAT  850

seq1  TAGTTCAGGTGGAGGC-AGAAGTACCTAGTTAAGTCATGGATTTCCAGAA  898
      ||||||||  |||||| |||||||||||||||||||||||||||||||||
seq2  TAGTTCAGTGGGAGGCAAGAAGTACCTAGTTAAGTCATGGATTTCCAGAA  900

seq1  ATAG-AGCCAATTTTGTTTTAAATAAAA--TAAAGT-AACAGACATCCGA  944
      |||| |||||||||||||||||||||||   ||||| ||||||||| |||
seq2  ATAGAAGCCAATTTTGTTTTAAATAAAAATAAAAGTAAACAGACAT-CGA  949

seq1  GCTTAAATGATCTAGCTAAATGTCTGTGTGGGGAAGTTCACACATCCTCC  994
      ||||||||||||||||||||||||||||| ||||||||   ||||| |||
seq2  GCTTAAATGATCTAGCTAAATGTCTGTGT-GGGAAGTTACAACATCTTCC  998

seq1  ACACTTTCTGCTTCTCTCTAATCACAGGCATTAGTCTTCCCGTGTTTCTG  1044
      |||||||||||||||||||||||||| ||| ||||||||||||||| |||
seq2  ACACTTTCTGCTTCTCTCTAATCACA-GCA-TAGTCTTCCCGTGTTCCTG  1046

seq1  -AATATCAAATTCACCTGC-AGTGCAAAAAT  1073
       |||||| ||||||||||| |||||||||||
seq2  AAATATCCAATTCACCTGCAAGTGCAAAAAT  1077


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