BAC Information

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BAC

Clone NameB6Ng01-274P01
Chromosome2 (Build37)
Map Location 84,689,952 - 84,842,328
singlet/doubletdoublet
Overlap geneSlc43a1, Rtn4rl2, Slc43a3, Prg2, Prg3, P2rx3
Upstream geneD430039N05Rik, Zswim2, LOC668096, LOC668100, LOC545432, LOC668107, LOC668113, LOC668115, LOC668119, LOC383725, Calcrl, Tfpi, LOC672763, Ctnnd1, 2700094K13Rik, Txndc14, Med19, Zdhhc5, Clp1, Ypel4, Serping1, Ube2l6, Smtnl1, Timm10
Downstream geneSsrp1, Tnks1bp1, Agtrl1, LOC625033, Lrrc55, Olfr987, GA_x5J8B7W531T-1241080-1240524, Olfr988, GA_x5J8B7W531T-1286425-1285652, Olfr990-ps1, Olfr991-ps1, Olfr992, Olfr993, Olfr994, Olfr995, 4833423E24Rik, Olfr996, Olfr997-ps1, Olfr998, Olfr999-ps1, Olfr1000, Olfr1001-ps1, Olfr1002, GA_x5J8B7W531T-1558688-1559570, Olfr1004-ps1, Olfr154, GA_x5J8B7W531T-1577060-1577325, Olfr1006, GA_x5J8B7W531T-1588603-1588734, Olfr1008, Olfr1009, Olfr1010, Olfr1012, Olfr1013, Olfr1014, Olfr1015, Olfr1016, GA_x5J8B7W3KVV-518538-519236, Olfr1018, Olfr1019, Olfr1020, Olfr1021-ps1, Olfr1022, Olfr1023, Olfr1024, Olfr1025-ps1, Olfr1026, Olfr1027-ps1, Olfr1028, Olfr1029, Olfr1030, Olfr1031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274P01.bB6Ng01-274P01.g
ACCGA076110GA076111
length860454
definitionB6Ng01-274P01.b B6Ng01-274P01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,841,469 - 84,842,328)(84,689,952 - 84,690,411)
sequence
gaattctgccttagtactggcccgtgaaggcagagccgcataaggagagc
atatttgatttagagtccagaagtccaatgcaattccagttccaagacca
gcacttaggagctgcaaagccacaggcaactcccttccctgccataggca
tctgcaaaatggggtgagtgccacccttctgtgtgggtgccacctgagtc
cagggggagaatgaaatgtgatcattcctctaagtccccagctcatccca
aagtacccagcagccacaactgaggagcaaaggactgagcaaaggactgg
ggcagatgtaggccgagttccagtgggaagtcctgcatgagtcatgtaac
ctcgcagagcatcctctgaaaagtatgaattgtttcccttcgccatggga
cgcagtcgagggtagcaggcggtgagggatccggaaacacttttctcagt
tatatataaacataattcttcagcaaataacaatggccaaccgcaggaaa
tgtttccagtgcccagggctgctctccagcactgacccgtgtgcttttga
ctctcacagcaaccctgcggtgcaggactattgccgctcaagctgtggcc
gctgagtctcaggaaggctaaattgctggcacatggttctatgagtcagg
ttctgagcccgagtaggttaaagttgggtcctgtgatacccaagcaagta
gacctgaagaagcctagagccagctgtggtcagctgcagtccaagctttt
atgctcataaaaatcttggggagagaggttttcagagatggctcagtggg
tagagtatacttgttgctcaagcatgaaggcctgaattcagccccccccc
cccacccccc
tcatggaccgctttgggcccaggcctcttcgactggtgggcaggtgaggt
ggctgggttgtgcggagatgcagggccaggaaggtgatgcagaggaaggg
aggcaaaaaaaaaaaaaaaaaatcatgccccatgtttctgtgtccttaca
gtgcctgctttgccgcatcctgcactctaatggccttggcctccagggac
actgaaggtaagccacctgccttcgtgtgccttctctagaatgggtgaga
tgaaggtgggccttgactctcacggccccacaaatgccctcatctaccct
tctttctcttcccagttttgtctccattgatattcctggcactgtccttg
aatggatttgctggcatctgcttaacgtttacctcactcacggtgagtat
tactgatttgccctggctgccatccagacacctaggagtgggtggggtta
gaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_84841469_84842328
seq2: B6Ng01-274P01.b_45_904 (reverse)

seq1  GGGGGGGGGGGGGGGGGGGCTGAATTCAGGCCTTCATGCTTGAGCAACAA  50
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGTGGGGGGGGGGGGCTGAATTCAGGCCTTCATGCTTGAGCAACAA  50

seq1  GTATACTCTACCCACTGAGCCATCTCTGAAAACCTCTCTCCCCAAGATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATACTCTACCCACTGAGCCATCTCTGAAAACCTCTCTCCCCAAGATTT  100

seq1  TTATGAGCATAAAAGCTTGGACTGCAGCTGACCACAGCTGGCTCTAGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAGCATAAAAGCTTGGACTGCAGCTGACCACAGCTGGCTCTAGGCT  150

seq1  TCTTCAGGTCTACTTGCTTGGGTATCACAGGACCCAACTTTAACCTACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAGGTCTACTTGCTTGGGTATCACAGGACCCAACTTTAACCTACTC  200

seq1  GGGCTCAGAACCTGACTCATAGAACCATGTGCCAGCAATTTAGCCTTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTCAGAACCTGACTCATAGAACCATGTGCCAGCAATTTAGCCTTCCT  250

seq1  GAGACTCAGCGGCCACAGCTTGAGCGGCAATAGTCCTGCACCGCAGGGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTCAGCGGCCACAGCTTGAGCGGCAATAGTCCTGCACCGCAGGGTT  300

seq1  GCTGTGAGAGTCAAAAGCACACGGGTCAGTGCTGGAGAGCAGCCCTGGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGAGAGTCAAAAGCACACGGGTCAGTGCTGGAGAGCAGCCCTGGGC  350

seq1  ACTGGAAACATTTCCTGCGGTTGGCCATTGTTATTTGCTGAAGAATTATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAAACATTTCCTGCGGTTGGCCATTGTTATTTGCTGAAGAATTATG  400

seq1  TTTATATATAACTGAGAAAAGTGTTTCCGGATCCCTCACCGCCTGCTACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATATAACTGAGAAAAGTGTTTCCGGATCCCTCACCGCCTGCTACC  450

seq1  CTCGACTGCGTCCCATGGCGAAGGGAAACAATTCATACTTTTCAGAGGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGACTGCGTCCCATGGCGAAGGGAAACAATTCATACTTTTCAGAGGAT  500

seq1  GCTCTGCGAGGTTACATGACTCATGCAGGACTTCCCACTGGAACTCGGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGCGAGGTTACATGACTCATGCAGGACTTCCCACTGGAACTCGGCC  550

seq1  TACATCTGCCCCAGTCCTTTGCTCAGTCCTTTGCTCCTCAGTTGTGGCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCTGCCCCAGTCCTTTGCTCAGTCCTTTGCTCCTCAGTTGTGGCTG  600

seq1  CTGGGTACTTTGGGATGAGCTGGGGACTTAGAGGAATGATCACATTTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTACTTTGGGATGAGCTGGGGACTTAGAGGAATGATCACATTTCAT  650

seq1  TCTCCCCCTGGACTCAGGTGGCACCCACACAGAAGGGTGGCACTCACCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCCCTGGACTCAGGTGGCACCCACACAGAAGGGTGGCACTCACCCC  700

seq1  ATTTTGCAGATGCCTATGGCAGGGAAGGGAGTTGCCTGTGGCTTTGCAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGCAGATGCCTATGGCAGGGAAGGGAGTTGCCTGTGGCTTTGCAGC  750

seq1  TCCTAAGTGCTGGTCTTGGAACTGGAATTGCATTGGACTTCTGGACTCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAGTGCTGGTCTTGGAACTGGAATTGCATTGGACTTCTGGACTCTA  800

seq1  AATCAAATATGCTCTCCTTATGCGGCTCTGCCTTCACGGGCCAGTACTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAATATGCTCTCCTTATGCGGCTCTGCCTTCACGGGCCAGTACTAA  850

seq1  GGCAGAATTC  860
      ||||||||||
seq2  GGCAGAATTC  860

seq1: chr2_84689952_84690411
seq2: B6Ng01-274P01.g_67_526

seq1  GAATTCTCATGGACCGCTTTGGGCCCAGGCCTCTTCGACTGGTGGGCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATGGACCGCTTTGGGCCCAGGCCTCTTCGACTGGTGGGCAGG  50

seq1  TGAGGTGGCTGGGTTGTGCGGAGATGCAGGGCCAGGAAGGTGATGCAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTGGCTGGGTTGTGCGGAGATGCAGGGCCAGGAAGGTGATGCAGAG  100

seq1  GAAGGGAGGCAAAAAAAAAAAAAAAAAATCATGCCCCATGTTTCTGTGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGAGGCAAAAAAAAAAAAAAAAAATCATGCCCCATGTTTCTGTGTC  150

seq1  CTTACAGTGCCTGCTTTGCCGCATCCTGCACTCTAATGGCCTTGGCCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAGTGCCTGCTTTGCCGCATCCTGCACTCTAATGGCCTTGGCCTCC  200

seq1  AGGGACACTGAAGGTAAGCCACCTGCCTTCGTGTGCCTTCTCTAGAATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACACTGAAGGTAAGCCACCTGCCTTCGTGTGCCTTCTCTAGAATGG  250

seq1  GTGAGATGAAGGTGGGCCTTGACTCTCACGGCCCCACAAATGCCCTCATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGATGAAGGTGGGCCTTGACTCTCACGGCCCCACAAATGCCCTCATC  300

seq1  TACCCTTCTTTCTCTTCCCAGTTTTGTCTCCATTGATATTCCTGGCACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTTCTTTCTCTTCCCAGTTTTGTCTCCATTGATATTCCTGGCACTG  350

seq1  TCCTTGAATGGATTTGCTGGCATCTGCTTAACGTTTACCTCACTCACGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGAATGGATTTGCTGGCATCTGCTTAACGTTTACCTCACTCACGGT  400

seq1  GAGTATTACTGATTTGCCCTGGCTGCCATCCAGACACCTAGGAGTGGGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATTACTGATTTGCCCTGGCTGCCATCCAGACACCTAGGAGTGGGTG  450

seq1  GGGTTAGAAA  460
      ||||||||||
seq2  GGGTTAGAAA  460