BAC Information

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BAC

Clone NameB6Ng01-275A19
Chromosome2 (Build37)
Map Location 78,055,005 - 78,055,179
singlet/doubletsinglet
Overlap geneLOC667920
Upstream geneSestd1, LOC623706, LOC667906, Zfp533, BC003993
Downstream geneOTTMUSG00000016703, LOC383717, LOC100040476, LOC100040494, 4930401B11Rik, Ube2e3, LOC100040526
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-275A19.bB6Ng01-275A19.g
ACCGA076191GA076192
length9851,154
definitionB6Ng01-275A19.b B6Ng01-275A19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatagagacccatgctccttgagagtgcattgagtgggatgcta
ttggatggcatgtttaagctgcccaaaaagaaaagttgggtaaaacgatc
ttgcattagttttggctttctgacattgtggcagaattttagaaacccca
ttgcacctggcatttaccctggagtgatgatggcctctaagccttgaaat
aatctcttataagtaatcagtgattttcatctcaaatttatggggatgtc
agacccttagtgtagctggcctctttgttcccagaataatgattctgaga
attaattacttatagagaaatgcctcggccataagctttagctcatcccc
caactagctcataacttatatgacctactctatctcttccacatggctgg
ctaattacctctcctaactatcttccaacatccccacatctctctctctc
ctctctctctctctctctttctctctctctccatatctaaccttctaatc
ctgcctcagcttactggacatcagcattttattgacaggtggtatttcca
catatttcacaagagattttctctacatcttccctttttagtccaataaa
aggctctttgtctaacatcaataaactaaatataataagaacaattatga
aaactatcaggtaaaaattatgtttatatcctagtccacatgcatttggc
aaccttggaaaaagttctctactatctatcctatcttggtgagttacagt
tctgtacctaaatcatgtgctatcataactttttcttaccaacttaaaat
atcttattacaccttaaaacattttcttaaatcctaaacgtcttaagctt
aattgtgagattataactatgtagtcttctaccccatcagagacctggga
aggataaacactaactgagtaaacaggaagtgctgagcaagcagcttcca
aaactacagagatgacagaggctcctggctacatg

gaattcagtgggcccagaaatgagagatgtgatcctccttttctgttttc
ttctaaaagcacttggagacttcatttgaatgtctgtgatatggaataaa
tgtgtggagcacccagaattatataaatatattctcagtgaaatgtacat
ttgcagtgcagtcattctcaccatttctattatgtacatgtgtgggatat
tttaggctgcggtgacctatgaagatgtgcatgtgaacttcactcatgaa
gaatgggctttgctggattcttcccagaagagtctctacaaagatgtgat
gctggaaacgtgcaggaacctcactgctataggtaagatgtaaagaagag
gacaagtgtttcttggttattggtgcacctctgtgatttctcttgtgaca
gaggaagaatgtggtaaatataaatactcagacatggttctcatgttcac
cagagactaacttaaaatttgcacagtatcaaataatacatcataaattt
tgtggtactgtattttagggtacagattggaagaccacaatattgaagaa
cactgtcaaagttctagaagacctgggaggtaatttttatgtgcaagcta
atacaaatgcatcactgtagacattttaatgtaccttgaagttttaatga
aaatcaacagtgtgaacagctttaagtatcctgatgattagtgaattctc
aaaagaccatgtacttggatttcaggtagctggccagtgtttgcaaggca
ttcctttaaggaaaaggagaaataatatcttagccaggcagtggtggtgc
atgcctttaaatcacagcacttgggaggcagaggcaggtggatttctgat
tttgaggccagcctggtctacagagtgagttccaggacagcccggctaaa
cagagaaaacctgtctcaaaaaacccaaaagagagagagagagaaagaga
gagagagagagagagagagagtgagagagcgctagagcgatagagtggac
agagcgagagagaaagtgagacgaatatctaccatgacacattttagtca
ggaagcttggtggaagacctgtagtccgttcgttcatcgatccgagtata
agaagcactgatatggacgatatgtctataaccatgtcgctccagtagta
cgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_78055005_78055179
seq2: B6Ng01-275A19.b_180_524

seq1  --------------------------------------------------  0
                                                        
seq2  TTTTAGAAACCCCATTGCACCTGGCATTTACCCTGGAGTGATGATGGCCT  50

seq1  --------------------------------------------------  0
                                                        
seq2  CTAAGCCTTGAAATAATCTCTTATAAGTAATCAGTGATTTTCATCTCAAA  100

seq1  --------------------------------------------------  0
                                                        
seq2  TTTATGGGGATGTCAGACCCTTAGTGTAGCTGGCCTCTTTGTTCCCAGAA  150

seq1  -------TTTTAGAAACCCCATTGCACATTACAAAACAGCCTTTTTTGTT  43
             | | ||||     ||| |  | || | ||  ||||      | 
seq2  TAATGATTCTGAGAA--TTAATTACTTA-TAGAGAAATGCCTCGGCCATA  197

seq1  TGTTTTTGCTCCACATTCTCATCTATTTCAT-GCCTCTCTCCATTTCTCT  92
       | ||| ||||  |   | || |||  ||||  | | | |    | ||||
seq2  AGCTTTAGCTCATC--CCCCAACTAGCTCATAACTTATATGACCTACTCT  245

seq1  CTCTCTCCC---------------TCCCTC-CCTTTCTCTCTCTC----T  122
       ||||| ||               | |||| |||  || |||  |    |
seq2  ATCTCTTCCACATGGCTGGCTAATTACCTCTCCTAACTATCTTCCAACAT  295

seq1  CCCTCCCTCTCTCCCTCCCCCTCTCTCTCCCTTTCTCTCTTTCTCTCTCT  172
      |||  | |||||| ||| |   ||||||| || |||||||||||||||||
seq2  CCCCACATCTCTCTCTCTC---CTCTCTCTCTCTCTCTCTTTCTCTCTCT  342

seq1  CTC  175
      |||
seq2  CTC  345


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