BAC Information

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BAC

Clone NameB6Ng01-276D13
Chromosome7 (Build37)2 (Build37)
Map Location 62,551,881 - 62,552,325123,817,147 - 123,818,287
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneMrps33p, LOC622146, Luzp2
Downstream geneLOC668796, Siglech, Tubgcp5, Cyfip1, Nipa2, Nipa1, LOC672959, Herc2, p
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-276D13.bB6Ng01-276D13.g
ACCGA077056GA077057
length6541,137
definitionB6Ng01-276D13.b B6Ng01-276D13.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(62,551,881 - 62,552,325)(123,817,147 - 123,818,287)
sequence
gaattctcacctgaggaatatcaaatgcctgagaagcacctgaaaaaaaa
tggagagcatccttttttttttttttttttttttttttttgacgagttac
ttactttttattttttccagtgttggggaatcaaactcagggttaggtag
gcgctgtagcacaaatggacactctccacccaagatttatttttttttca
aggtatttttttccatttattattaggtatttagctcatttacatttcca
atgctataccaaaagtcccccatacccacccaccccccactcccctaccc
acccactccccctttttggccctggcattcccctgtactggggcatataa
agtttgcaagtccaatgggcctctctttccagggatggccaactaggcca
tcttttgatacatatgcagctagagacaagagctccagggtactggttag
ttcataatgttgttccacctatagggtggcaaatccctttagctccttgg
gtactttctctagctcctccattgggggccctgtgatccatccaataact
gactgtgagcatccacttatgtgtttgctaggccccggcatattctcaca
aagagacagctaatatctgggtccttttcaacaaaatcttgctagtcgta
tgca
gaattcttgtagttagtctaagaattcacttcatgaactcagaatgagtt
agaatgatgtccatgttcctcatgtcttcaggctgatgttcatatctcac
cattctccttgggttgggttaaaatatgtatttgttctctcagcctcaac
atggcccttttaatgatctctctgatgaggagtcagaacatctatgaata
tgtgcatatgtataaagtgatatacacagggatccttcaccttatagatc
cttcacctcttctattgtctctacccacactgtggccatggtgcacaagg
cagaatattggctttagtcttccaaacagaccactgctgtgataagatat
tgggacacattggttagcattagatataattctttaaaacagcctgaatt
aactgtcaattgttagcacaattcactctgctgatgttctatttgctgtt
ttaacaaacaactcagataaaaacatacctcatacagaaatagtaaaata
ataccctctctgcccatgtggaatatacttcatgttaaatagtgggaaac
aacaagggcgatatgacaagaaaagataggacagagaatataccgcatca
attagctttgagttacaaaggtaacagcatctgtaaaacctgttccatta
aatcaaagaggactctgctgacatgcagatgcagagagagatacaaggag
agataatgcagcttagtgcaagtgtcaggtgagtacagtgtatgaaaagg
gagcttaccatagataagaaagaatataaatacctcaaacatatcacact
agaaacagcaagatgatgaatgtatcctttagcaaaagaaatgaaatatg
agcaggaaaatgcaagcaaaacaattcagaaactcatacatgacaggggc
agacatatttaaagctctttgaagaaggaggaccctgaccaatctttgtg
gtcatgtgttggcattacccaggttgtagtcttatatctgcttgagggtt
agttagtcagcagttacttttatcacgtacccaaatacattttcaacgta
aaggctcaattctaaagcataggatttttattaattgctttaattaatga
tggagttaaaagaatttataccatcgtgatgcattaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_62551881_62552325
seq2: B6Ng01-276D13.b_251_699

seq1  TTTTTTTCCATTTTTTATTAGGTATTTAGCTCATTTACATTTCCAACGCT  50
      ||||||||||||| |||||||||||||||||||||||||||||||| |||
seq2  TTTTTTTCCATTTATTATTAGGTATTTAGCTCATTTACATTTCCAATGCT  50

seq1  ATACCAAAAGTCCCCCATAGCCACCCA-CCCCCACTCCCCTACCCACCCA  99
      ||||||||||||||||||| ||||||| ||||||||||||||||||||||
seq2  ATACCAAAAGTCCCCCATACCCACCCACCCCCCACTCCCCTACCCACCCA  100

seq1  CTCCCCTTTTTTGGCCCTGGCACGTTCCCCTGTACTGGGGCATATAAAGT  149
      |||||| |||||||||||||||  ||||||||||||||||||||||||||
seq2  CTCCCCCTTTTTGGCCCTGGCA--TTCCCCTGTACTGGGGCATATAAAGT  148

seq1  TTGCGTGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGCCTAGGCCATCT  199
      ||||  ||||||||||||||||||||||| |||||||  |||||||||||
seq2  TTGCAAGTCCAATGGGCCTCTCTTTCCAGGGATGGCCAACTAGGCCATCT  198

seq1  TTTGATACATATGCAGCTAGAGTCAAGAGCTCTGGGGTACTGGTTAGTTC  249
      |||||||||||||||||||||| |||||||||  ||||||||||||||||
seq2  TTTGATACATATGCAGCTAGAGACAAGAGCTCCAGGGTACTGGTTAGTTC  248

seq1  ATAATGTTGTTCCACCTATAGGGTTGCAGATCCCTTTAGCTTCTTGGGTA  299
      |||||||||||||||||||||||| ||| |||||||||||| ||||||||
seq2  ATAATGTTGTTCCACCTATAGGGTGGCAAATCCCTTTAGCTCCTTGGGTA  298

seq1  CTTTCTCTAGCTCCATCATTGGGGGCCATGTGATCCATCCAATAGCCGAC  349
      ||||||||||||||  ||||||||||| |||||||||||||||| | |||
seq2  CTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGATCCATCCAATAACTGAC  348

seq1  TGTGAGCATCCACTTCTATGTTTGCTAGGCCCAGGCATACTCTGAC-AAG  398
      ||||||||||||||| | |||||||||||||| |||||| ||| || |||
seq2  TGTGAGCATCCACTTATGTGTTTGCTAGGCCCCGGCATATTCTCACAAAG  398

seq1  AGACAGCT-ATATCAGGGTCCTTT--CACATAATCTTGCTAGT-GTATGC  444
      |||||||| ||||| |||||||||   ||| |||||||||||| ||||||
seq2  AGACAGCTAATATCTGGGTCCTTTTCAACAAAATCTTGCTAGTCGTATGC  448

seq1  A  445
      |
seq2  A  449

seq1: chr2_123817147_123818287
seq2: B6Ng01-276D13.g_65_1201 (reverse)

seq1  TTAATGCATCACGAT-GTATAATATCTTTTAAACTCATTCAATAATAAAA  49
      ||||||||||||||| ||||||  |||||| |||||  ||| |||| |||
seq2  TTAATGCATCACGATGGTATAAATTCTTTT-AACTCCATCATTAATTAAA  49

seq1  GCAAATTATAAAAATTCTAATGCTTTTGGAAATGAGCCTTTACGTTTGAA  99
      |||| | |||||||| || |||| ||| ||| ||||||||||||||   |
seq2  GCAATTAATAAAAATCCT-ATGC-TTTAGAATTGAGCCTTTACGTT--GA  95

seq1  AAATGTATTTGGGTACGTGAT-AAAGTAACTGCTGACTAACTAACCCTCA  148
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AAATGTATTTGGGTACGTGATAAAAGTAACTGCTGACTAACTAACCCTCA  145

seq1  AGCAGATATAAGACTACAAACCTGGGTAATGCCAACACATGACCACAAAG  198
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AGCAGATATAAGACTAC-AACCTGGGTAATGCCAACACATGACCACAAAG  194

seq1  ATTGGTCAGGGTCCTCCTTCTTCAAAGAGCTTTAAATATGTCTGCCCCTG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTCAGGGTCCTCCTTCTTCAAAGAGCTTTAAATATGTCTGCCCCTG  244

seq1  TCATGTATGAGTTTCTGAATTGTTTTGCTTGCATTTTCCTGCTCATATTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTATGAGTTTCTGAATTGTTTTGCTTGCATTTTCCTGCTCATATTT  294

seq1  CATTTCTTTTGCTAAAGGATACATTCATCATCTTGCTGTTTCTAGTGTGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTTTTGCTAAAGGATACATTCATCATCTTGCTGTTTCTAGTGTGA  344

seq1  TATGTTTGAGGTATTTATATTCTTTCTTATCTATGGTAAGCTCCCTTTTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTTGAGGTATTTATATTCTTTCTTATCTATGGTAAGCTCCCTTTTC  394

seq1  ATACACTGTACTCACCTGACACTTGCACTAAGCTGCATTATCTCTCCTTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACTGTACTCACCTGACACTTGCACTAAGCTGCATTATCTCTCCTTG  444

seq1  TATCTCTCTCTGCATCTGCATGTCAGCAGAGTCCTCTTTGATTTAATGGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCTCTCTGCATCTGCATGTCAGCAGAGTCCTCTTTGATTTAATGGA  494

seq1  ACAGGTTTTACAGATGCTGTTACCTTTGTAACTCAAAGCTAATTGATGCG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTTTTACAGATGCTGTTACCTTTGTAACTCAAAGCTAATTGATGCG  544

seq1  GTATATTCTCTGTCCTATCTTTTCTTGTCATATCGCCCTTGTTGTTTCCC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATTCTCTGTCCTATCTTTTCTTGTCATATCGCCCTTGTTGTTTCCC  594

seq1  ACTATTTAACATGAAGTATATTCCACATGGGCAGAGAGGGTATTATTTTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTTAACATGAAGTATATTCCACATGGGCAGAGAGGGTATTATTTTA  644

seq1  CTATTTCTGTATGAGGTATGTTTTTATCTGAGTTGTTTGTTAAAACAGCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTCTGTATGAGGTATGTTTTTATCTGAGTTGTTTGTTAAAACAGCA  694

seq1  AATAGAACATCAGCAGAGTGAATTGTGCTAACAATTGACAGTTAATTCAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAACATCAGCAGAGTGAATTGTGCTAACAATTGACAGTTAATTCAG  744

seq1  GCTGTTTTAAAGAATTATATCTAATGCTAACCAATGTGTCCCAATATCTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTTTAAAGAATTATATCTAATGCTAACCAATGTGTCCCAATATCTT  794

seq1  ATCACAGCAGTGGTCTGTTTGGAAGACTAAAGCCAATATTCTGCCTTGTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAGCAGTGGTCTGTTTGGAAGACTAAAGCCAATATTCTGCCTTGTG  844

seq1  CACCATGGCCACAGTGTGGGTAGAGACAATAGAAGAGGTGAAGGATCTAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATGGCCACAGTGTGGGTAGAGACAATAGAAGAGGTGAAGGATCTAT  894

seq1  AAGGTGAAGGATCCCTGTGTATATCACTTTATACATATGCACATATTCAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGAAGGATCCCTGTGTATATCACTTTATACATATGCACATATTCAT  944

seq1  AGATGTTCTGACTCCTCATCAGAGAGATCATTAAAAGGGCCATGTTGAGG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTTCTGACTCCTCATCAGAGAGATCATTAAAAGGGCCATGTTGAGG  994

seq1  CTGAGAGAACAAATACATATTTTAACCCAACCCAAGGAGAATGGTGAGAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAGAACAAATACATATTTTAACCCAACCCAAGGAGAATGGTGAGAT  1044

seq1  ATGAACATCAGCCTGAAGACATGAGGAACATGGACATCATTCTAACTCAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACATCAGCCTGAAGACATGAGGAACATGGACATCATTCTAACTCAT  1094

seq1  TCTGAGTTCATGAAGTGAATTCTTAGACTAACTACAAGAATTC  1141
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGTTCATGAAGTGAATTCTTAGACTAACTACAAGAATTC  1137