BAC Information

Click to search

BAC

Clone NameB6Ng01-277O10
Chromosome2 (Build37)
Map Location 111,048,470 - 111,114,971
singlet/doubletdoublet
Overlap gene4930430A15Rik, Olfr1275, Olfr1276, Olfr1277
Upstream geneLOC668797, Bbox1, 1110018M03Rik, LOC668799, Slc5a12, Muc15, LOC668802, LOC623270, LOC623301
Downstream geneOlfr1278, Olfr1279, Olfr1280, Olfr1281, Olfr1282, Olfr1283, Olfr1284, LOC100043465, Olfr1285, Olfr1286, Olfr1287, Olfr1288, Olfr1289, Olfr1290, GA_x5J8B7W4T2P-95628-96096, Olfr1292-ps1, Olfr1293, Olfr1294, Olfr1295, LOC668822, Olfr1297, Olfr1298, Olfr1299, Olfr1300-ps1, Olfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825, Olfr1305, Olfr1306, LOC668827, Olfr1307, Olfr1308, Olfr1309, LOC433463, Olfr1310, Olfr1311, Olfr1312, Olfr1313, Olfr1314, Olfr1315-ps1, Olfr1316, Olfr1317, Olfr1318, GA_x5J8B7W3P0G-705890-705633, LOC100043187, Agpat7, Nut, Nola3, Slc12a6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-277O10.bB6Ng01-277O10.g
ACCGA078293GA078294
length1,0931,159
definitionB6Ng01-277O10.b B6Ng01-277O10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(111,048,470 - 111,049,573)(111,113,793 - 111,114,971)
sequence
gaattcaaatctgacaaattaagaaaagtagtggaaacatagtttttaat
tttgtattttatgatttctttctacagacctcatagattcagagctgtaa
ccaaattagaatataaattagagtgcaaataagctgcagataatcatgaa
tgtggtccaacttgatttcatgggtatgttctatcttcactgcagaagaa
actaccctataaatgggactaaaggaaaactctgctctctcagaaacact
tgctccaggccctaccatagctgaggacatgggtagatagctctgccatt
gccattccaagtcaacacaggaaatcttaagaaatattgggattcacaac
aagacattttagggtgcagacataaaaggacccacaggtggcttaaaatt
tagaattttaaacacctgctcatttccttcattttcgttctgttctacat
gtagcttttcacctttctcctcctcttcagtgctctcctaacattcctta
actgtgaaaatactcacaggacactcatacacctagtactaaccacaatt
gaaaatattttcttttaacttcctataacaaaaagaaagtcctacagcca
tttaatatactgtgtgattcaagaaacattacgtggataattttaatggc
aagaaaataatttctttccccttgttacattttatctcagtatttgtgat
gtgtattaatatatgagttgtctatgcatggtataggcatatgtgtcaat
gcagttgcatgcctgtgtaagcacaaataggccagaagaggacaacagga
aatcttgactatactacctacctacctacctacctacctacctacctacc
tacctacctacctattttattcccataagacaagaactatcagagtttgg
agctggacaagtagtcagaatatctcagtgatgcctatgacactttctcc
aaagtgctgagttactgataacacacaggatgcacactgtttatgtgact
ctagttatctgaacataagtcttcatgctttcacagcaacactgtttctt
tcaagaatcactcccagctctgtctgcctttgctctttagttt
gaattccccccaatgtccttattattccaagttatataatcatctctgaa
gactcatcctaggacgcagaaataagaaaaaaaaggtgtggtgttattca
aactcagaaagcataaacatttaaaaaatcttataagatgacttaagaga
ttacacaaaaataagtacatacattgttcttgcagatcacccttgttgtt
ttgtgactgaggatactattaacaatttagttcattattaattaatgtac
atgtgggaatgagactaaaatcaatgctttactgttgggtaacagatttt
aaatctagatatgcggcacacagtgcattgttcatgcctgagcacagata
ctttcctccccctgtagccattttcatgtatgcatgaatgaaaaacattg
gtgaccaattaactagatgaactcccaaagacagtcacctactgtttgag
aaaagtaatgtagcgtccacagtaatgtgtcagttcagtgctttaatata
ttagttcttctgaaactattaaacaaatactttaaaccatgcttagccat
tgtcacctaaagttactattaaatcaccaccttcttcttcttgacttagc
gacagatggatatactggtagctgctattctcaattctgaaactgtgagg
tctcaaagggacaagatatagatagaagaaagttcccttctcaagaggct
actctgcactaaatatataccttataattttacaagaacacttggcacaa
cagaaaatggattgttttgccttactttggtattatctcagaaagttgtt
ataaatatggaaaatcattgattcatgaaaaaaatttggtcaggttctta
tgtttttctgaagaaaatgtgatctatatactcttgtttatttcttattt
cttgtttatttcttatccctgtctctaggaattaagaaaattccatattg
ttttaatatcatcttactataatattaataggtgggattgaactctcaca
ctgatttcagaaatattaagattttgtgaatatctatgggatgtctgatc
tcaaagcatcagagagctttttttggtcatgtgaacctggcctgaagaca
tgttctcatgattgcacatggcgagtctcgttcatgaaataaggatttct
tacaaacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_111048470_111049573
seq2: B6Ng01-277O10.b_44_1136

seq1  GAATTCAAATCTGACAAATTAAGAAAAGTAGTGGAAACATAGTTTTTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATCTGACAAATTAAGAAAAGTAGTGGAAACATAGTTTTTAAT  50

seq1  TTTGTATTTTATGATTTCTTTCTACAGACCTCATAGATTCAGAGCTGTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATTTTATGATTTCTTTCTACAGACCTCATAGATTCAGAGCTGTAA  100

seq1  CCAAATTAGAATATAAATTAGAGTGCAAATAAGCTGCAGATAATCATGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATTAGAATATAAATTAGAGTGCAAATAAGCTGCAGATAATCATGAA  150

seq1  TGTGGTCCAACTTGATTTCATGGGTATGTTCTATCTTCACTGCAGAAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTCCAACTTGATTTCATGGGTATGTTCTATCTTCACTGCAGAAGAA  200

seq1  ACTACCCTATAAATGGGACTAAAGGAAAACTCTGCTCTCTCAGAAACACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACCCTATAAATGGGACTAAAGGAAAACTCTGCTCTCTCAGAAACACT  250

seq1  TGCTCCAGGCCCTACCATAGCTGAGGACATGGGTAGATAGCTCTGCCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCAGGCCCTACCATAGCTGAGGACATGGGTAGATAGCTCTGCCATT  300

seq1  GCCATTCCAAGTCAACACAGGAAATCTTAAGAAATATTGGGATTCACAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTCCAAGTCAACACAGGAAATCTTAAGAAATATTGGGATTCACAAC  350

seq1  AAGACATTTTAGGGTGCAGACATAAAAGGACCCACAGGTGGCTTAAAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACATTTTAGGGTGCAGACATAAAAGGACCCACAGGTGGCTTAAAATT  400

seq1  TAGAATTTTAAACACCTGCTCATTTCCTTCATTTTCGTTCTGTTCTACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTTTAAACACCTGCTCATTTCCTTCATTTTCGTTCTGTTCTACAT  450

seq1  GTAGCTTTTCACCTTTCTCCTCCTCTTCAGTGCTCTCCTAACATTCCTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTTTTCACCTTTCTCCTCCTCTTCAGTGCTCTCCTAACATTCCTTA  500

seq1  ACTGTGAAAATACTCACAGGACACTCATACACCTAGTACTAACCACAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGAAAATACTCACAGGACACTCATACACCTAGTACTAACCACAATT  550

seq1  GAAAATATTTTCTTTTAACTTCCTATAACAAAAAGAAAGTCCTACAGCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATATTTTCTTTTAACTTCCTATAACAAAAAGAAAGTCCTACAGCCA  600

seq1  TTTAATATACTGTGTGATTCAAGAAACATTACGTGGATAATTTTAATGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATATACTGTGTGATTCAAGAAACATTACGTGGATAATTTTAATGGC  650

seq1  AAGAAAATAATTTCTTTCCCCTTGTTACATTTTATCTCAGTATTTGTGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAATAATTTCTTTCCCCTTGTTACATTTTATCTCAGTATTTGTGAT  700

seq1  GTGTATTAATATATGAGTTGTCTATGCATGGTATAGGCATATGTGTCAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATTAATATATGAGTTGTCTATGCATGGTATAGGCATATGTGTCAAT  750

seq1  GCAGTTGCATGCCTGTGTAAGCACAAATAGGCCAGAAGAGGACAACAGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTGCATGCCTGTGTAAGCACAAATAGGCCAGAAGAGGACAACAGGA  800

seq1  AATCTTGACTATACTACCTACCTACCTACCTACCTACCTACCTACCTACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTGACTATACTACCTACCTACCTACCTACCTACCTACCTACCTACC  850

seq1  TACCTACCTACCTATTTTATTCCCATAAGACAAGAACTATCAGAGTTTGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTACCTACCTATTTTATTCCCATAAGACAAGAACTATCAGAGTTTGG  900

seq1  AGCTGGACAAGTAGTCAGAATATCTCAGTGATGCCTATGACACTTTCTCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGACAAGTAGTCAGAATATCTCAGTGATGCCTATGACACTTTCTCC  950

seq1  AAAGTGCTGAGTTACTGATACACACAAGGAATGCACAACTGTTTATGTGA  1000
      |||||||||||||||||||| |||||  | |||||| |||||||||||||
seq2  AAAGTGCTGAGTTACTGATA-ACACACAGGATGCAC-ACTGTTTATGTGA  998

seq1  CTCTAGTTATCTGAACATAAGTCTTCATGCTTTCACAGCAAACACTGTTT  1050
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTCTAGTTATCTGAACATAAGTCTTCATGCTTTCACAGC-AACACTGTTT  1047

seq1  CCTTTTCAAAGAATCAACTCCCCAGCCTTCTGTCCTGCTTTTGCTCTTTA  1100
      |  |||| ||||||| ||| ||||||  ||||| |||| |||||||||||
seq2  C--TTTC-AAGAATC-ACT-CCCAGC--TCTGT-CTGCCTTTGCTCTTTA  1089

seq1  GTTT  1104
      ||||
seq2  GTTT  1093

seq1: chr2_111113793_111114971
seq2: B6Ng01-277O10.g_66_1224 (reverse)

seq1  ATGTTTGTAAGAAATCCCTTATTTCATGAACACTATGCATCCCCATGGTT  50
      ||||||||||||||| |||||||||||||||     |  || |||| || 
seq2  ATGTTTGTAAGAAAT-CCTTATTTCATGAAC---GAGACTCGCCAT-GTG  45

seq1  CAGAATCATTGAGAACATGTCTTTCAGCCAGG-TCACCAATGA-CAAAAA  98
      |  ||||| ||||||||||||||   |||||| ||||  |||| ||||||
seq2  C--AATCA-TGAGAACATGTCTTCAGGCCAGGTTCAC--ATGACCAAAAA  90

seq1  AAGCTCTTCTTGATGCTTTTGGAGATCAGACATCCCATAAGATTATTTCA  148
      |||||||   |||||||||  ||||||||||||||||| ||||   ||||
seq2  AAGCTCT--CTGATGCTTT--GAGATCAGACATCCCAT-AGAT--ATTCA  133

seq1  CAAAATCTTAATATTTCTGAAATCAGTGTGAGAGTTTCAAATCCCACCTA  198
      ||||||||||||||||||||||||||||||||||||   |||||||||||
seq2  CAAAATCTTAATATTTCTGAAATCAGTGTGAGAGTT--CAATCCCACCTA  181

seq1  TTAATATTTATAGTAAGATGATATTAAAACAATATGGAATTTTCTTAAAT  248
      |||||| |||||||||||||||||||||||||||||||||||||||||  
seq2  TTAATA-TTATAGTAAGATGATATTAAAACAATATGGAATTTTCTTAA--  228

seq1  TTCCTAGAGACAGGGATAAGAAATAAACAAGAAATAAGAAATAAACAAGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAGAGACAGGGATAAGAAATAAACAAGAAATAAGAAATAAACAAGA  278

seq1  GTATATAGATCACATTTTCTTCAGAAAAACATAAGAACCTGACCAAATTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATAGATCACATTTTCTTCAGAAAAACATAAGAACCTGACCAAATTT  328

seq1  TTTTCATGAATCAATGATTTTCCATATTTATAACAACTTTCTGAGATAAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATGAATCAATGATTTTCCATATTTATAACAACTTTCTGAGATAAT  378

seq1  ACCAAAGTAAGGCAAAACAATCCATTTTCTGTTGTGCCAAGTGTTCTTGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAGTAAGGCAAAACAATCCATTTTCTGTTGTGCCAAGTGTTCTTGT  428

seq1  AAAATTATAAGGTATATATTTAGTGCAGAGTAGCCTCTTGAGAAGGGAAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTATAAGGTATATATTTAGTGCAGAGTAGCCTCTTGAGAAGGGAAC  478

seq1  TTTCTTCTATCTATATCTTGTCCCTTTGAGACCTCACAGTTTCAGAATTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCTATCTATATCTTGTCCCTTTGAGACCTCACAGTTTCAGAATTG  528

seq1  AGAATAGCAGCTACCAGTATATCCATCTGTCGCTAAGTCAAGAAGAAGAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAGCAGCTACCAGTATATCCATCTGTCGCTAAGTCAAGAAGAAGAA  578

seq1  GGTGGTGATTTAATAGTAACTTTAGGTGACAATGGCTAAGCATGGTTTAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTGATTTAATAGTAACTTTAGGTGACAATGGCTAAGCATGGTTTAA  628

seq1  AGTATTTGTTTAATAGTTTCAGAAGAACTAATATATTAAAGCACTGAACT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTGTTTAATAGTTTCAGAAGAACTAATATATTAAAGCACTGAACT  678

seq1  GACACATTACTGTGGACGCTACATTACTTTTCTCAAACAGTAGGTGACTG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACATTACTGTGGACGCTACATTACTTTTCTCAAACAGTAGGTGACTG  728

seq1  TCTTTGGGAGTTCATCTAGTTAATTGGTCACCAATGTTTTTCATTCATGC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGGGAGTTCATCTAGTTAATTGGTCACCAATGTTTTTCATTCATGC  778

seq1  ATACATGAAAATGGCTACAGGGGGAGGAAAGTATCTGTGCTCAGGCATGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATGAAAATGGCTACAGGGGGAGGAAAGTATCTGTGCTCAGGCATGA  828

seq1  ACAATGCACTGTGTGCCGCATATCTAGATTTAAAATCTGTTACCCAACAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGCACTGTGTGCCGCATATCTAGATTTAAAATCTGTTACCCAACAG  878

seq1  TAAAGCATTGATTTTAGTCTCATTCCCACATGTACATTAATTAATAATGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCATTGATTTTAGTCTCATTCCCACATGTACATTAATTAATAATGA  928

seq1  ACTAAATTGTTAATAGTATCCTCAGTCACAAAACAACAAGGGTGATCTGC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAATTGTTAATAGTATCCTCAGTCACAAAACAACAAGGGTGATCTGC  978

seq1  AAGAACAATGTATGTACTTATTTTTGTGTAATCTCTTAAGTCATCTTATA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACAATGTATGTACTTATTTTTGTGTAATCTCTTAAGTCATCTTATA  1028

seq1  AGATTTTTTAAATGTTTATGCTTTCTGAGTTTGAATAACACCACACCTTT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTTTAAATGTTTATGCTTTCTGAGTTTGAATAACACCACACCTTT  1078

seq1  TTTTTCTTATTTCTGCGTCCTAGGATGAGTCTTCAGAGATGATTATATAA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTATTTCTGCGTCCTAGGATGAGTCTTCAGAGATGATTATATAA  1128

seq1  CTTGGAATAATAAGGACATTGGGGGGAATTC  1179
      |||||||||||||||||||||||||||||||
seq2  CTTGGAATAATAAGGACATTGGGGGGAATTC  1159