BAC Information

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BAC

Clone NameB6Ng01-278P08
Chromosome2 (Build37)
Map Location 123,290,215 - 123,291,320
singlet/doubletsinglet
Overlap genenone
Upstream geneBambi-ps1, Rp23-357i14.1, Gatm, Spata5l1, AA467197, Slc30a4, Pldn, Sqrdl
Downstream gene4930517E11Rik, LOC100043360
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-278P08.bB6Ng01-278P08.g
ACCGA079065GA079066
length1,1021,219
definitionB6Ng01-278P08.b B6Ng01-278P08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatcagcgaagcccacctgggcctggaatattctagtgagaagta
gtctaaattactaattcaatcacttttacttgttatatgtattccaattt
cttgttttacttgagtcaaattcagtagtctttgtctctctaagaatttt
gagtttcatttatataacctaatttgttggcatacaatgtaggtaattct
gataatcctttttacttccccaaacttggcagcattactctcaatttcat
ttctcattgtagtatttcattattttctctgttagtctagctaaagagtc
ttcaattttgctgctcatttcaaagaaccaacttgtggcttcattgactt
tttcatttttctattctgtattttatatatttgctggcttctcttgacac
ccacaaggttttccattttcttcttccaaacatttctatgtattttcagg
tacgatggggcagtagggattgtgttaacctctgtggtatatcatagtga
gcaaaaccagacacaagtctcagacagtccatcttgttatttgaatagaa
agcagtgacattatcagacatgtttacttaaaattcagtatattttaagc
actccaattctaaaataatatataaacaattatttcttgacatagagtga
gaaaaagatttaagggggtggaaataaagaactaaggatcaatcaagagc
tggtctttgaaagtggacaaggggcctcaggaaagtgtcagtaagtggtt
ttcttgtataaggaactgaagtggggaagatgtagctggaatataggtaa
atgaagacatgctaagaagatcttttagtgctcgccattccacactgcac
ctgtcaacttttggcttcatagcagaatggatatagggataaacacagtt
tgagaaacagagtcaagaataattttgcttttgcttgtaaaattgggtgg
agtgatgtgtcatattaattgaactaggattctgtgggggaatcattgga
agttgcattaccctgattaatgagttaatctgtgttaagtggaaaataag
agccaatagctaaatgatcaatagtattcttaaagtgcctcattatagca
aa
gaattctttccttctcttctatggtgaaaaaaacctgcaaaagctattgg
caatcatctcaagtgggctgatgagagaacattaatgattctaccaggct
agttagtccagccagattttctgaaaaagtaggatggttaaatttccagt
tatagagatcagctgacaagaatggccagtactgaagagtctggagagag
tgagggtcttcaggtggccccactgcgcaaaggaaaggcagacatggtgt
caggaacctcatctacagagggtcactgggcatgtcggctttgggtccca
gcttctggtcctctgactgcgccgccactggccccagggacctctagatg
ttgtagaggcacagaaaccagagaggggcaagggatagagaggaggagga
gattctggccactcagaaggcccctcaatctcgggatagatcttgggggg
agctgagggccaaggcaaaggctccattttgggaggaacctttgatttca
cttttggtctgtggagagccagggcttgggatcctggtttctgctatggg
atccacggtttgacccatgggggtggattctggatgaggtcttgccacac
agttatgtagggctgctggtccaggtgagacccaggctcatcctgaaaga
caacagctttaacttcaaagatcacagtcaagtcaaaagtcccctctggt
ggccagcccatgttaaatgttggccacttggaaaaatgtctgccaaggtc
ccttcttgatttccactgaaaggttgtgggccctcaatctaactttggtc
caatgatctaatgtcaaacttaagggggttatcactgtctgtcccattgt
ctaagtcacgaaaaaacacaaacagacacagagatacccacccaaagact
gacaaatacacaaaacccatccaaggatacagaagatcgggcctggtatg
taggtcctttccaatcaaggaagacttactggagtcctcacccccagtcc
cagtcagactcttggagttcttccccttgcttccgaaggcaacccccaga
gtggcagtccagtgaatcccatattatgtcttgcgaatcaccactctggg
gtcttcatcttcaaagactaaggtctctccactctcccattgagagactc
aactgctaaaccggaactttcccagcctttcgacaggcaccacgagaaaa
tggtgttatccatgctact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_123290215_123291320
seq2: B6Ng01-278P08.b_45_1146

seq1  GAATTCATCAGCGAAGCCCACCTGGGCCTGGAATATTCTAGTGAGAAGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCAGCGAAGCCCACCTGGGCCTGGAATATTCTAGTGAGAAGTA  50

seq1  GTCTAAATTACTAATTCAATCACTTTTACTTGTTATATGTATTCCAATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAAATTACTAATTCAATCACTTTTACTTGTTATATGTATTCCAATTT  100

seq1  CTTGTTTTACTTGAGTCAAATTCAGTAGTCTTTGTCTCTCTAAGAATTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTTTACTTGAGTCAAATTCAGTAGTCTTTGTCTCTCTAAGAATTTT  150

seq1  GAGTTTCATTTATATAACCTAATTTGTTGGCATACAATGTAGGTAATTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTCATTTATATAACCTAATTTGTTGGCATACAATGTAGGTAATTCT  200

seq1  GATAATCCTTTTTACTTCCCCAAACTTGGCAGCATTACTCTCAATTTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATCCTTTTTACTTCCCCAAACTTGGCAGCATTACTCTCAATTTCAT  250

seq1  TTCTCATTGTAGTATTTCATTATTTTCTCTGTTAGTCTAGCTAAAGAGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCATTGTAGTATTTCATTATTTTCTCTGTTAGTCTAGCTAAAGAGTC  300

seq1  TTCAATTTTGCTGCTCATTTCAAAGAACCAACTTGTGGCTTCATTGACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATTTTGCTGCTCATTTCAAAGAACCAACTTGTGGCTTCATTGACTT  350

seq1  TTTCATTTTTCTATTCTGTATTTTATATATTTGCTGGCTTCTCTTGACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTTTTCTATTCTGTATTTTATATATTTGCTGGCTTCTCTTGACAC  400

seq1  CCACAAGGTTTTCCATTTTCTTCTTCCAAACATTTCTATGTATTTTCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAGGTTTTCCATTTTCTTCTTCCAAACATTTCTATGTATTTTCAGG  450

seq1  TACGATGGGGCAGTAGGGATTGTGTTAACCTCTGTGGTATATCATAGTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGATGGGGCAGTAGGGATTGTGTTAACCTCTGTGGTATATCATAGTGA  500

seq1  GCAAAACCAGACACAAGTCTCAGACAGTCCATCTTGTTATTTGAATAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAACCAGACACAAGTCTCAGACAGTCCATCTTGTTATTTGAATAGAA  550

seq1  AGCAGTGACATTATCAGACATGTTTACTTAAAATTCAGTATATTTTAAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTGACATTATCAGACATGTTTACTTAAAATTCAGTATATTTTAAGC  600

seq1  ACTCCAATTCTAAAATAATATATAAACAATTATTTCTTGACATAGAGTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAATTCTAAAATAATATATAAACAATTATTTCTTGACATAGAGTGA  650

seq1  GAAAAAGATTTAAGGGGGTGGAAATAAAGAACTAAGGATCAATCAAGAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAGATTTAAGGGGGTGGAAATAAAGAACTAAGGATCAATCAAGAGC  700

seq1  TGGTCTTTGAAAGTGGACAAGGGGCCTCAGGAAAGTGTCAGTAAGTGGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTTTGAAAGTGGACAAGGGGCCTCAGGAAAGTGTCAGTAAGTGGTT  750

seq1  TTCTTGTATAAGGAACTGAAGTGGGGAAGATGTAGCTGGAATATAGGTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTATAAGGAACTGAAGTGGGGAAGATGTAGCTGGAATATAGGTAA  800

seq1  ATGAAGACATGCTAAGAAGATCTTTTAGTGCTCGCCATTCCACACTGCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGACATGCTAAGAAGATCTTTTAGTGCTCGCCATTCCACACTGCAC  850

seq1  CTGTCAAACTTTTGGCTTCATAGCAGAATGGATATAGGGATAAACACAG-  899
      ||||| ||||||||||||||||||||||||||||||||||||||||||| 
seq2  CTGTC-AACTTTTGGCTTCATAGCAGAATGGATATAGGGATAAACACAGT  899

seq1  TTGAGAAACAAGAGTCAAGAATAATTTTGCTTTTGCTTGTAAAATTGGGT  949
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAAAC-AGAGTCAAGAATAATTTTGCTTTTGCTTGTAAAATTGGGT  948

seq1  -GAGTGATGTGTCAATAATTAATTGAACTAGGATTCTGTGGGGGATTCAT  998
       |||||||||||||   |||||||||||||||||||||||||||| ||||
seq2  GGAGTGATGTGTCA--TATTAATTGAACTAGGATTCTGTGGGGGAATCAT  996

seq1  TGGA--GTGCATTACCCTGATATATTGAGTTTAATCTGTTGTTAAGT-GA  1045
      ||||   |||||||||||||| || |||| |||||||| |||||||| ||
seq2  TGGAAGTTGCATTACCCTGAT-TAATGAG-TTAATCTG-TGTTAAGTGGA  1043

seq1  AAATATAGAGCAAATAGCTAAATTGAATTAAATAGTATT-TATAAGTG-C  1093
      ||||| ||||| |||||||||| |||  | ||||||||| |  ||||| |
seq2  AAATA-AGAGCCAATAGCTAAA-TGA--TCAATAGTATTCTTAAAGTGCC  1089

seq1  TCATTATAGCAAA  1106
      |||||||||||||
seq2  TCATTATAGCAAA  1102