MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-279C03
Chromosome	2 (Build37)
Map Location	58,133,369 - 58,133,537
singlet/doublet	singlet
Overlap gene	Acvr1c
Upstream gene	Gpd2, LOC271788, Galnt5, A330104H05Rik, LOC667026, Pscdbp, LOC100042926
Downstream gene	LOC667062, Acvr1, LOC674940, Upp2, BC062650, Pkp4
Link	Open Mouse BAC browser

Click to get alignment info.

name	Gpd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14571 MGI:99778
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC271788 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:271788
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins

name	Galnt5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:241391 MGI:2179403
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A330104H05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77767 MGI:1925017
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667026 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667026
definition	note : nudix (nucleoside diphosphate linked moiety X)-type motif 15 pseudogene pseudo : _no_value

name	Pscdbp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:227929 MGI:2183535
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042926 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042926
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 ESTs

name	Acvr1c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:269275 MGI:2661081
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667062 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667062
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 254 ESTs, 4 Proteins pseudo : _no_value

name	Acvr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11477 MGI:87911
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC674940 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:674940
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	Upp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76654 MGI:1923904
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC062650 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:227933 MGI:3039583
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 3 Proteins

name	Pkp4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:227937 MGI:109281
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981768 GeneID:14571 MGI:99778
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glycerol phosphate dehydrogenase 2, mitochondrial transcript_id : NM_010274.2

name	LOC271788 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249286 GeneID:271788
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins product : similar to Charged multivesicular body protein 6 (Chromatin-modifying protein 6) transcript_id : XM_001477205.1

name	Galnt5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367249 GeneID:241391 MGI:2179403
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 transcript_id : NM_172855.2

name	A330104H05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142361751 GeneID:77767 MGI:1925017
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A330104H05 gene transcript_id : NM_029972.3

name	Pscdbp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124378016 GeneID:227929 MGI:2183535
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pleckstrin homology, Sec7 and coiled-coil domains, binding protein transcript_id : NM_139200.4

name	LOC100042926 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249323 GeneID:100042926
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 ESTs product : hypothetical protein LOC100042926, transcript variant 2 transcript_id : XM_001479905.1

name	LOC100042926 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249325 GeneID:100042926
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 ESTs product : hypothetical protein LOC100042926, transcript variant 1 transcript_id : XM_001479902.1

name	Acvr1c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802377 GeneID:269275 MGI:2661081
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : activin A receptor, type IC transcript_id : NM_001033369.2

name	Acvr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254648 GeneID:11477 MGI:87911
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : activin A receptor, type 1 transcript_id : NM_007394.2

name	Upp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892991 GeneID:76654 MGI:1923904
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : uridine phosphorylase 2 transcript_id : NM_029692.2

name	BC062650 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149249292 GeneID:227933 MGI:3039583
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 3 Proteins product : cDNA sequence BC062650, transcript variant 3 transcript_id : XM_906580.3

name	Pkp4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51491820 GeneID:227937 MGI:109281
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : plakophilin 4 transcript_id : NM_026361.1

name	Gpd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981769 CCDS:CCDS16045.1 GeneID:14571 MGI:99778
definition	EC_number : 1.1.99.5 GO_component : GO:0009331 - glycerol-3-phosphate dehydrogenase complex [Evidence TAS]; GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IEA] [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0004368 - glycerol-3-phosphate dehydrogenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0006094 - gluconeogenesis [Evidence IMP]; GO:0006072 - glycerol-3-phosphate metabolism [Evidence IMP] codon_start : 1 exception : mismatches in translation note : FAD-linked glycerol-3-phosphate dehydrogenase; glycerol phosphate dehydrogenase 1, mitochondrial; glycerol-3-phosphate dehydrogenase product : glycerol phosphate dehydrogenase 2, mitochondrial protein_id : NP_034404.2

name	LOC271788 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249287 GeneID:271788
definition	codon_start : 1 product : similar to Charged multivesicular body protein 6 (Chromatin-modifying protein 6) protein_id : XP_001477255.1

name	Galnt5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370294 GeneID:241391 MGI:2179403
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0004653 - polypeptide N-acetylgalactosaminyltransferase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0005529 - sugar binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] codon_start : 1 exception : mismatches in translation note : ppGaNTase-T5 product : UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 protein_id : NP_766443.1

name	A330104H05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:60097931 CCDS:CCDS16047.1 GeneID:77767 MGI:1925017
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008092 - cytoskeletal protein binding [Evidence IEA] codon_start : 1 product : hypothetical protein LOC77767 protein_id : NP_084248.2

name	Pscdbp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21105855 CCDS:CCDS16048.1 GeneID:227929 MGI:2183535
definition	GO_component : GO:0005938 - cell cortex [Evidence ISS]; GO:0005737 - cytoplasm [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence ISS] [Evidence IEA] GO_process : GO:0030155 - regulation of cell adhesion [Evidence ISS] codon_start : 1 note : cytohesin binding protein; tamalin; pleckstrin homology Sec7 and coiled-coil domains binding protein product : pleckstrin homology, Sec7 and coiled-coil domains, binding protein protein_id : NP_631939.1

name	LOC100042926 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249324 GeneID:100042926
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001479955.1

name	LOC100042926 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249326 GeneID:100042926
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001479952.1

name	Acvr1c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701866 CCDS:CCDS16049.1 GeneID:269275 MGI:2661081
definition	GO_component : GO:0048179 - activin receptor complex [Evidence ISS]; GO:0009986 - cell surface [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0048185 - activin binding [Evidence ISS]; GO:0016361 - activin receptor activity, type I [Evidence ISS]; GO:0005524 - ATP binding [Evidence IEA] [Evidence ISS]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0005024 - transforming growth factor beta receptor activity [Evidence IEA]; GO:0004675 - transmembrane receptor protein serine/threonine kinase activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0030154 - cell differentiation [Evidence ISS]; GO:0007368 - determination of left/right symmetry [Evidence IMP]; GO:0001701 - embryonic development (sensu Mammalia) [Evidence IMP]; GO:0043065 - positive regulation of apoptosis [Evidence ISS]; GO:0006468 - protein amino acid phosphorylation [Evidence ISS] [Evidence IEA]; GO:0042981 - regulation of apoptosis [Evidence ISS]; GO:0001834 - trophectodermal cell proliferation [Evidence ISS] codon_start : 1 note : activin receptor-like kinase 7 product : activin A receptor, type IC protein_id : NP_001028541.1

name	Acvr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254649 CCDS:CCDS16050.1 GeneID:11477 MGI:87911
definition	GO_component : GO:0045177 - apical part of cell [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0048185 - activin binding [Evidence IPI]; GO:0016361 - activin receptor activity, type I [Evidence IDA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0019838 - growth factor binding [Evidence IDA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004702 - receptor signaling protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0050431 - transforming growth factor beta binding [Evidence IDA]; GO:0005024 - transforming growth factor beta receptor activity [Evidence IEA]; GO:0005025 - transforming growth factor beta receptor activity, type I [Evidence IDA]; GO:0004675 - transmembrane receptor protein serine/threonine kinase activity [Evidence IEA] GO_process : GO:0007368 - determination of left/right symmetry [Evidence IMP]; GO:0009790 - embryonic development [Evidence IMP]; GO:0001701 - embryonic development (sensu Mammalia) [Evidence IMP]; GO:0007369 - gastrulation [Evidence IMP]; GO:0007281 - germ cell development [Evidence IMP]; GO:0007507 - heart development [Evidence IMP]; GO:0001707 - mesoderm formation [Evidence IMP]; GO:0001755 - neural crest cell migration [Evidence IMP]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0007179 - transforming growth factor beta receptor signaling pathway [Evidence TAS] [Evidence IDA]; GO:0007178 - transmembrane receptor protein serine/threonine kinase signaling pathway [Evidence IEA]; GO:0001655 - urogenital system development [Evidence ISS] codon_start : 1 note : activin A receptor type 1 product : activin A receptor, type 1 protein_id : NP_031420.2

name	Upp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27597065 CCDS:CCDS16051.1 GeneID:76654 MGI:1923904
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005829 - cytosol [Evidence ISS]; GO:0045098 - type III intermediate filament [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA]; GO:0004850 - uridine phosphorylase activity [Evidence IEA] [Evidence ISS] GO_process : GO:0009116 - nucleoside metabolism [Evidence ISS]; GO:0009166 - nucleotide catabolism [Evidence IEA]; GO:0046108 - uridine metabolism [Evidence ISS] codon_start : 1 product : liver-specific uridine phosphorylase protein_id : NP_083968.1

name	BC062650 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149249293 GeneID:227933 MGI:3039583
definition	codon_start : 1 product : hypothetical protein LOC227933 isoform 3 protein_id : XP_911673.3

name	Pkp4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51491821 CCDS:CCDS16052.1 GeneID:227937 MGI:109281
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA] codon_start : 1 product : plakophilin 4 protein_id : NP_080637.1

name	LOC674940 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674940
definition	number : 1 pseudo : _no_value

name	LOC674940 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674940
definition	number : 2 pseudo : _no_value

name	LOC674940 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674940
definition	number : 3 pseudo : _no_value

name	LOC667062 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149249327 GeneID:667062
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 254 ESTs, 4 Proteins product : similar to ribosomal protein L29 pseudo : _no_value transcript_id : XR_034449.1

clone name	MSMg01-434C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130D10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-195I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-198N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-170H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-202D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153K11
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-279C03.b	B6Ng01-279C03.g
ACC	GA079191	GA079192
length	1,214	169
definition	B6Ng01-279C03.b	B6Ng01-279C03.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattccaactcaattcttcaacgaattaaaaagagcaatctgcaaattc atctggaataaaaaaacctatgatagcaaaaactctttttaaggataaaa gaacctctggtggaatcaccatgcctgacctaaagctgtactacagggca attgtgataaaaactgcatggtactggtatagcaacagacaagtagacca atgaaacagaattgaagacccagaaatgaacccacacacctatggccact tgatcgtcgacaagggagctaaaaccatccagtggaaacaagacagcatt ttcaacaaatggtgctggcacaactgttggttatcatgtagaagaatgcg aattgatccattcctatctccttgttctaaggtcaaatctaagtggatta aggaactccacataaaaccagagacactgaaacttatagaggagaaagta gggaaaagcctcaaagatatgggtacaggggaaaagttcctgaatagaac agcaatggcttgtgctgtaagattgagaatcgattaatgggacctcataa agttgcaaatcttctgcaaggaaaaagacaccgtcaaccagacaaaaaga ccaccaaaagtttgggaaagtatctttacctatcctaaatcagatagggg actaatatccaatatatataaagaactcaagaaggtgggctccagaaaat caaataaccccattaaaaaatggggctcagagctgaacaaaaaattctca cctgaggaatactgaatggctgagaagcaccttaaaaaatgttcaacatc cttaatcatcagggaaatgcaaatcaaaacaacactgagatttcacctta taccagtcagaatggctaagatcaaaaattcaggtgacagcagatgctgg cgaggatgtggagaaagaggaacactcctccattgttggtgggattgcaa gcttgtacaaccactctggaaatcagtctggcagttcctcagaaaaattg ggacatagtactaccggaggatctgcatactctctgggcatatatccagg agaagtcccaacagttaagaagaacacatgatccacttatgttcatagcc agccttattttataataagcaggagctgggaaagaaccagaaatggcctt cacagaggattgcatacgagaaatgtgggttacactcttacacacatgtg gagatacttatcct	taagagaaatgagagtaatgaaattgctgtatcagtggagaaaagttaaa tgctgcttaaagcagtttacaggtattcccttgtaagtgagatgcaggta ggatgcagcttggcttaggatttcctatgtgcatgtgtgtgtgcatgcat gtatgtgtgtgtgtgtgtg
quality values	Open. Hide. 58 33 26 35 58 58 41 22 42 58 62 39 27 62 62 62 62 62 62 37 20 62 62 62 62 62 54 49 62 62 62 35 42 31 38 21 45 28 32 35 59 62 62 59 62 62 62 62 62 59 59 62 62 49 49 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 54 62 62 59 59 56 38 49 43 49 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 54 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 59 62 54 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 59 62 62 62 62 62 62 59 54 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 46 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 47 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 51 58 58 58 54 58 54 54 58 58 46 54 58 54 58 46 49 58 54 58 41 47 58 58 54 58 52 58 58 58 54 58 58 58 54 58 58 54 58 58 58 58 58 58 54 52 54 54 58 54 58 58 58 58 50 58 53 53 54 58 58 54 58 47 58 49 54 58 53 58 50 54 58 58 58 58 52 51 31 54 51 58 49 53 58 58 58 53 53 58 58 58 58 50 58 58 58 53 53 49 48 58 58 58 58 50 47 51 51 50 54 58 58 51 54 58 58 51 54 50 48 58 50 52 46 58 58 58 41 23 53 58 41 53 52 51 58 58 37 58 51 51 53 52 49 52 53 53 58 58 51 51 54 41 58 39 35 50 50 58 39 22 51 39 58 58 58 42 53 52 37 32 39 36 12 25 27 35 52 39 19 39 49 49 44 50 54 54 42 27 49 51 39 54 54 54 54 18 32 54 54 54 54 39 53 52 38 27 44 24 53 47 34 54 23 37 32 54 54 54 54 33 42 53 53 42 52 42 41 46 53 46 37 18 53 53 38 37 33 37 37 53 40 32 37 53 51 33 53 52 51 16 51 45 35 45 26 17 51 38 52 28 53 53 53 51 24 33 52 26 32 37 45 31 32 31 45 28 34 32 42 26 33 34 45 33 39 36 24 15 47 34 32 51 37 31 41 31 23 51 30 31 31 29 51 51 30 31 21 43 43 26 43 43 29 34 30 31 23 51 39 36 23 25 41 30 31 31 36 32 31 30 31 32 31 31 32 31 33 31 27 27 29 30 31 24 31 22 32 25 31 32 46 47 48 31 33 32 38 12 13 22 14 32 31 20 31 31 37 32 13 31 23 32 37 31 33 32 36 21 33 9 30 20 19 30 23 24 29 39 33 38 44 33 27 26 24 13 33 31 31 21 28 32 26 21 38 22 28 21 33 16 37 15 30 24 30 27 24 37 27 37 26 16 25 21 25 21 32 36 19 19 25 14 25 32 14 15 24 6 9 32 32 25 27 31 37 29 48 26 31 28 24 28 34 34 32 28 20 21 22 17 17 14 16 15 24 17 5 5 20 33 48 39 17 11 19 7 34 9 18 17 20 28 18 16 21 28 26 26 27 19 15 5 6 30 9 8 27 16 30 9 25 10 16 5 8 14 3 8 11 22 6 27 40 17 7 14 14 6 10 7 18 11 24 12 8 7 25 4 7 8 5 7 10 28 13 7 6 16 16 10 16 11 15 7 12 18 8 2 2 6 6 4 10 8 11 10 21 11 17 17 8 18 9 7 5 13 11 4 17 7 11 20 15 21 10 9 23 5 17 10 14 7 20 10 30 30 13 7 17 10 12 6 4 7 6 7 3 7 4 9 3 7 6 8 22 7 12 28 18 10 7 17 3 3 2 4 4 16 20 7 6 6 5 5 2 2 4 11 4 3 3 5 4 2 3 1 4 2 1 2 9 5 8 5 8 4 18 17 13 1 2 7 16 8 17 3 5 6 7 6 6 6 4 4 6 8 5 6 14 4 8 2 1 3 4 11 6 6 4 3 7 7 4 4 7 5 6 5 2 2	Open. Hide. 59 62 49 49 62 40 59 50 34 26 54 59 56 49 44 43 62 59 59 59 62 62 51 59 54 54 62 59 59 62 49 59 59 59 59 59 62 54 62 62 62 62 62 62 43 59 62 62 59 59 59 54 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 59 59 62 62 54 62 62 62 62 62 59 49 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 47 62 62 49 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 54 62 62 62 62 62 62 62 49 49 49 49 54 54 54 54 54 54 54 54 43 6 6 13

Alignment Information

BAC End 1

BAC End 2

seq1: chr2_58133369_58133537
seq2: B6Ng01-279C03.g_71_239 (reverse)

seq1  CACACACACACACACATACATGCATGCACACACACATGCACATAGGAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACATACATGCATGCACACACACATGCACATAGGAAAT  50

seq1  CCTAAGCCAAGCTGCATCCTACCTGCATCTCACTTACAAGGGAATACCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAGCCAAGCTGCATCCTACCTGCATCTCACTTACAAGGGAATACCTG  100

seq1  TAAACTGCTTTAAGCAGCATTTAACTTTTCTCCACTGATACAGCAATTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTGCTTTAAGCAGCATTTAACTTTTCTCCACTGATACAGCAATTTC  150

seq1  ATTACTCTCATTTCTCTTA  169
      |||||||||||||||||||
seq2  ATTACTCTCATTTCTCTTA  169

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information