BAC Information

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BAC

Clone NameB6Ng01-279D04
Chromosome2 (Build37)
Map Location 77,351,141 - 77,484,766
singlet/doubletdoublet
Overlap geneZfp533
Upstream geneOsbpl6, Prkra, Dfnb59, Fkbp7, Plekha3, Ttn, 2610301F02Rik, Sestd1, LOC623706, LOC667906
Downstream geneBC003993, LOC667920, OTTMUSG00000016703, LOC383717, LOC100040476
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-279D04.bB6Ng01-279D04.g
ACCGA079240GA079241
length1,1091,013
definitionB6Ng01-279D04.b B6Ng01-279D04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,351,141 - 77,352,255)(77,483,743 - 77,484,766)
sequence
gaattccttatatttaaatgcagaaagaatgagatttatttactatgtac
tgcacactgtggtttaggtaagtacgtgacaggctttgctgcagctggca
accttttgagacaaatgggagcatttcacaatttcagtttagacggccaa
agctgaattagaaatatgtcagttttattatagttcttctaacttgctcc
ccggtaggatgaagaacagacgtgcaagatggaagactcaaagatgggaa
aacaggcttctaacagatgcattctccggctttgaaagcagcgttttcat
acacctgacttatcaaaggggaatgccatgtgctggttcctgaattacca
agtgtttagagaagccagaaggaactccagacatggtcttactgaaagtg
tctgaggacaggcatggcctgagagacacacgagcctggtgacttttttt
ttttttcttttttggctaaacgactcagggagacggtcctaagttttgtc
tgcttagtttctcctggccttggcatccagacttcttgcagtctaacagt
ttaaagctatttagacaaacacagcaatggtttttgctgtctccacttag
aacgctagaaaactaactgtaccgtagagctatggcttattgtaggaagt
attctaaaaagactttcctaggaaagataactgtgtttcccaagtgatcg
aatattcctagacaagttctatcatagatattattaaggggaaatacagt
ttaggttaatacagtttagagttgatttgagtgaagtaagagttcaccat
gacacttgacaagtgaaccaactctgagtgcatagtccagtgtcactgct
ttgaatatttaagctggtgccccctaagctgtataagaattacaaggttt
attattgtaattattatcatctttcttggggaattagagaagggtcagaa
taaggtctcttacagcccaggctggccctgagtgaactcactgtgctgct
gagagatcatcatctattgttctgcctctacctctcagacagaggtacag
atgtgcacgctcaagaggcatcctaactcagtcagtttacgttcatagtg
ctcctgatt
gaattctgtgtttggctttgggagatgcagggtttttttttttttaatca
aagtgggatgaagtaattcctattctttgataagtactttgttccacaat
taattttataaagtatttgtctattagccattaagagacattcataaaat
gaaacagaaagagacaaaaacgggatggtgcataaccagcccctctctac
ctgccggctcctccctgtggtcaaggtccctgtcccccataccctagatc
tcatctcagggttagcctcagctatcaagggtataaatctacctcctaag
gcataaaaataagtttttaaagtaagagatgaaacgatggaaaacccttc
ctagtctaggagtaatttccgttttggatttaggaaaaatgaaaactcca
agccatgacagccaagatgtcactgacaaggagattctgtaggcctgcgc
catcttctgtctgcatgccagtaaataggtttatcagagaaaaacaatcc
tggagggaggcagaaggcttcagaaaagaaagtgcacaaaaaatgccatc
gctaggggttggagctcagaaagacccgatttacacataaaaggctgttt
acttcatatttataccaagaacagtagaaaatgggaagaagccttgggaa
tgatgcataggccctgacaatcatgctaatgccacacatgtaagcagaga
gctgggggcgaggaagtagagcaggaaagaaacgtccgaatgtgttctgg
acccacagaaggaggaagaagagtcaccgaagggaacaaggcaggtaggg
aaaccccgggatataaagacagactcctgggtatggaaaacactttctga
agatgtatgtagagggtgttgagacttagcactccttgtgtgaccttgtc
acatatacatacatgaccttgatacatcacacataaaaaataatgattgt
ttaaggataggactcatatatgggctgtctgataatattatctcatagat
atctaatcagcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_77351141_77352255
seq2: B6Ng01-279D04.b_45_1153

seq1  GAATTCCTTATATTTAAATGCAGAAAGAATGAGATTTATTTACTATGTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTATATTTAAATGCAGAAAGAATGAGATTTATTTACTATGTAC  50

seq1  TGCACACTGTGGTTTAGGTAAGTACGTGACAGGCTTTGCTGCAGCTGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACACTGTGGTTTAGGTAAGTACGTGACAGGCTTTGCTGCAGCTGGCA  100

seq1  ACCTTTTGAGACAAATGGGAGCATTTCACAATTTCAGTTTAGACGGCCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTTGAGACAAATGGGAGCATTTCACAATTTCAGTTTAGACGGCCAA  150

seq1  AGCTGAATTAGAAATATGTCAGTTTTATTATAGTTCTTCTAACTTGCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAATTAGAAATATGTCAGTTTTATTATAGTTCTTCTAACTTGCTCC  200

seq1  CCGGTAGGATGAAGAACAGACGTGCAAGATGGAAGACTCAAAGATGGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGTAGGATGAAGAACAGACGTGCAAGATGGAAGACTCAAAGATGGGAA  250

seq1  AACAGGCTTCTAACAGATGCATTCTCCGGCTTTGAAAGCAGCGTTTTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGCTTCTAACAGATGCATTCTCCGGCTTTGAAAGCAGCGTTTTCAT  300

seq1  ACACCTGACTTATCAAAGGGGAATGCCATGTGCTGGTTCCTGAATTACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTGACTTATCAAAGGGGAATGCCATGTGCTGGTTCCTGAATTACCA  350

seq1  AGTGTTTAGAGAAGCCAGAAGGAACTCCAGACATGGTCTTACTGAAAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTAGAGAAGCCAGAAGGAACTCCAGACATGGTCTTACTGAAAGTG  400

seq1  TCTGAGGACAGGCATGGCCTGAGAGACACACGAGCCTGGTGACTTTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGGACAGGCATGGCCTGAGAGACACACGAGCCTGGTGACTTTTTTT  450

seq1  TTTTTTCTTTTTTGGCTAAACGACTCAGGGAGACGGTCCTAAGTTTTGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTTTTTTGGCTAAACGACTCAGGGAGACGGTCCTAAGTTTTGTC  500

seq1  TGCTTAGTTTCTCCTGGCCTTGGCATCCAGACTTCTTGCAGTCTAACAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTAGTTTCTCCTGGCCTTGGCATCCAGACTTCTTGCAGTCTAACAGT  550

seq1  TTAAAGCTATTTAGACAAACACAGCAATGGTTTTTGCTGTCTCCACTTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGCTATTTAGACAAACACAGCAATGGTTTTTGCTGTCTCCACTTAG  600

seq1  AACGCTAGAAAACTAACTGTACCGTAGAGCTATGGCTTATTGTAGGAAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGCTAGAAAACTAACTGTACCGTAGAGCTATGGCTTATTGTAGGAAGT  650

seq1  ATTCTAAAAAGACTTTCCTAGGAAAGATAACTGTGTTTCCCAAGTGATCG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAAAAAGACTTTCCTAGGAAAGATAACTGTGTTTCCCAAGTGATCG  700

seq1  AATATTCCTAGACAAGTTCTATCATAGATATTATTAAGGGGAAATACAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCCTAGACAAGTTCTATCATAGATATTATTAAGGGGAAATACAGT  750

seq1  TTAGGTTAATACAGTTTAGAGTTGATTTGAGTGAAGTAAGAGTTCACCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTTAATACAGTTTAGAGTTGATTTGAGTGAAGTAAGAGTTCACCAT  800

seq1  GACACTTGACAAGTGAACCAACTCTGAGTGCATAGTCCAGTGTCACTGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTTGACAAGTGAACCAACTCTGAGTGCATAGTCCAGTGTCACTGCT  850

seq1  TTGAATATTTAAGCTGGTGCCCCCTAAGCTGTATAAGAATTAC-AGGTTT  899
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TTGAATATTTAAGCTGGTGCCCCCTAAGCTGTATAAGAATTACAAGGTTT  900

seq1  ATTATTGTAATTATTATCATCTTTCTTGGGGAATTAGAGAAGGGTCAGAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTGTAATTATTATCATCTTTCTTGGGGAATTAGAGAAGGGTCAGAA  950

seq1  TAAGGTCTCTTACAGCCCAGGCTGGCCCTGAGTGAACTCACTGTGCTGCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTCTCTTACAGCCCAGGCTGGCCCTGAGTGAACTCACTGTGCTGCT  1000

seq1  GAGGAGATCATTCATCTATTGTTCTTGCCTCTACCTCTCAGGAACAGAGG  1049
      || ||||||| ||||||||||||| ||||||||||||||||  |||||||
seq2  GA-GAGATCA-TCATCTATTGTTC-TGCCTCTACCTCTCAG--ACAGAGG  1045

seq1  TTACAGATGTGCACCGCCTCAGAGGCATCCTTACCTTCAGTCA-TTTACG  1098
       |||||||||||| |||   ||||||||||| ||  ||||||| ||||||
seq2  -TACAGATGTGCA-CGCTCAAGAGGCATCCTAAC--TCAGTCAGTTTACG  1091

seq1  TTCATAGTGCT-CTGATT  1115
      ||||||||||| ||||||
seq2  TTCATAGTGCTCCTGATT  1109

seq1: chr2_77483743_77484766
seq2: B6Ng01-279D04.g_66_1078 (reverse)

seq1  CTGCTGATTAGGAATATCTATGAGATAATATTTATCCAGACAAGCCAATA  50
      |||||||||||  ||||||||||||||||| |||| ||||| |||| || 
seq2  CTGCTGATTAG--ATATCTATGAGATAATA-TTAT-CAGAC-AGCCCAT-  44

seq1  ATATTGAAGTCCTATCCTTAAACAATCATTATTTTTTTATGTGTGATGTT  100
      ||||   |||||||||||||||||||||||| |||||||||||||||| |
seq2  ATAT--GAGTCCTATCCTTAAACAATCATTA-TTTTTTATGTGTGATG-T  90

seq1  ATCAAAGGTCATGTATGTATATGTGACAAGGTCACACAAGGAGTGCTAAG  150
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATC-AAGGTCATGTATGTATATGTGACAAGGTCACACAAGGAGTGCTAAG  139

seq1  TCTCAACACCCTCTACATACATCTTCAGAAAGTGTTTTCCATACCCAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAACACCCTCTACATACATCTTCAGAAAGTGTTTTCCATACCCAGGA  189

seq1  GTCTGTCTTTATATCCCGGGGTTTCCCTACCTGCCTTGTTCCCTTCGGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTCTTTATATCCCGGGGTTTCCCTACCTGCCTTGTTCCCTTCGGTG  239

seq1  ACTCTTCTTCCTCCTTCTGTGGGTCCAGAACACATTCGGACGTTTCTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTCTTCCTCCTTCTGTGGGTCCAGAACACATTCGGACGTTTCTTTC  289

seq1  CTGCTCTACTTCCTCGCCCCCAGCTCTCTGCTTACATGTGTGGCATTAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTACTTCCTCGCCCCCAGCTCTCTGCTTACATGTGTGGCATTAGC  339

seq1  ATGATTGTCAGGGCCTATGCATCATTCCCAAGGCTTCTTCCCATTTTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTGTCAGGGCCTATGCATCATTCCCAAGGCTTCTTCCCATTTTCTA  389

seq1  CTGTTCTTGGTATAAATATGAAGTAAACAGCCTTTTATGTGTAAATCGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCTTGGTATAAATATGAAGTAAACAGCCTTTTATGTGTAAATCGGG  439

seq1  TCTTTCTGAGCTCCAACCCCTAGCGATGGCATTTTTTGTGCACTTTCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTGAGCTCCAACCCCTAGCGATGGCATTTTTTGTGCACTTTCTTT  489

seq1  TCTGAAGCCTTCTGCCTCCCTCCAGGATTGTTTTTCTCTGATAAACCTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAGCCTTCTGCCTCCCTCCAGGATTGTTTTTCTCTGATAAACCTAT  539

seq1  TTACTGGCATGCAGACAGAAGATGGCGCAGGCCTACAGAATCTCCTTGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGGCATGCAGACAGAAGATGGCGCAGGCCTACAGAATCTCCTTGTC  589

seq1  AGTGACATCTTGGCTGTCATGGCTTGGAGTTTTCATTTTTCCTAAATCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACATCTTGGCTGTCATGGCTTGGAGTTTTCATTTTTCCTAAATCCA  639

seq1  AAACGGAAATTACTCCTAGACTAGGAAGGGTTTTCCATCGTTTCATCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGGAAATTACTCCTAGACTAGGAAGGGTTTTCCATCGTTTCATCTCT  689

seq1  TACTTTAAAAACTTATTTTTATGCCTTAGGAGGTAGATTTATACCCTTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTAAAAACTTATTTTTATGCCTTAGGAGGTAGATTTATACCCTTGA  739

seq1  TAGCTGAGGCTAACCCTGAGATGAGATCTAGGGTATGGGGGACAGGGACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGAGGCTAACCCTGAGATGAGATCTAGGGTATGGGGGACAGGGACC  789

seq1  TTGACCACAGGGAGGAGCCGGCAGGTAGAGAGGGGCTGGTTATGCACCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCACAGGGAGGAGCCGGCAGGTAGAGAGGGGCTGGTTATGCACCAT  839

seq1  CCCGTTTTTGTCTCTTTCTGTTTCATTTTATGAATGTCTCTTAATGGCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGTTTTTGTCTCTTTCTGTTTCATTTTATGAATGTCTCTTAATGGCTA  889

seq1  ATAGACAAATACTTTATAAAATTAATTGTGGAACAAAGTACTTATCAAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACAAATACTTTATAAAATTAATTGTGGAACAAAGTACTTATCAAAG  939

seq1  AATAGGAATTACTTCATCCCACTTTGATTAAAAAAAAAAAAACCCTGCAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGAATTACTTCATCCCACTTTGATTAAAAAAAAAAAAACCCTGCAT  989

seq1  CTCCCAAAGCCAAACACAGAATTC  1024
      ||||||||||||||||||||||||
seq2  CTCCCAAAGCCAAACACAGAATTC  1013