BAC Information

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BAC

Clone NameB6Ng01-279J21
Chromosome2 (Build37)
Map Location 134,259,194 - 134,260,249
singlet/doubletsinglet
Overlap genenone
Upstream geneA430048G15Rik, Bmp2
Downstream geneHao1, Txndc13, LOC627897, LOC433478, Plcb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-279J21.bB6Ng01-279J21.g
ACCGA079553GA079554
length1,1561,050
definitionB6Ng01-279J21.b B6Ng01-279J21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatatcgaatggagaagaacctaaagaaatgttc
aacatccttagtcatcaggcaaatccaaacaaccctgaggtggaaacctc
acacctgtcagaatggctaagatcaaaaactcagtgacagcagatgctgc
aaggatgtggtgaaagaggaacacttctccattgctggtgggactgcaag
ctggtacaaccactctggaaatcagtctgatggttcctcagaaaattgga
catagcactacctgaggacccagctatatcactcctgggcatatacccag
aagatgttccaacatgtaataagggcacatgatccactatgttcatagca
gccttatttataagaaccagaaactggaaagaactcagatgtcctccaaa
agaggaatggatacagaaaatgtggtacatctacacaatggagtactact
taggtattaaaaacaatgaaattcttaggcaaatgagtggaattagaaaa
tattatcctgagtgaggtaacccaatcacaaaagaacacatgtggtatgc
atccactgattagtggatattagctcaaaagctcagcaattcacagaaca
catgaagctcaagaagaaggaagaccaaagtgttcatgcttcagtccttc
ttagaaggtgtaacaaaatactcatggaaggaaatatagagactaagtgt
gaagcagggactgaagaaaggccatccagagactttccctatctgaggat
gcatcccatatacagacatcaaacccagacactattgcggatgccataag
tacatgctgacaggagcctggtagagctgtcccctgaaagtctttgacag
agcctgacgaatatagaggtgcatgctcacagccaaccatcggactgagc
acagggtccccaatggaggagttagagaaagactaaaggatatgaaaggg
atttgcaaccccatagaagagcacaatatcacccaaccagacccccttat
atctctcaggaactaaccacaaccaaagagtacatggtggagtgaccaat
gcttagccgcatgggtagcagaggatggccttgtccagcatcatgaaagg
atcatgtaagccttagtctgtgaagctccaatggcccttatgatacggga
atgtga
gaattctctccacatgacttacaaacctgtctgctcctcccatgtacact
ggaaaaataaacaggcacaagtttatattcagtctggacaatggtaggca
cttgtcacaatcttggcccaaatgggatttctgagaggtaggagacatca
ctgaagttttccatgtccaggcaccagtatcggcttcattgaatcagact
ctggaatgagtcaatactggtgagtctatgccctctaccacagagcaaga
ccacatctaattggccaaccacagacacatcagaatcaaacctattctga
tggttctttggggaatatttcacaagttcagctattcattcatgtgtcat
atgattcctctcattacagggttctttcttgtgcccaatttctgaatttg
aatactcagcctactttcacggctacatttctgtagagatgagaaaagcc
cacttactgcctaatcagagccattaaaccccctttacccttgcagtgtt
cagttaacaaattaatctcttctttcaatttctctgattaaaacattcac
cttgatataactttttgagatcataatggtcacagtacctcttccagttg
gtactgggaaaggatttcccccttttattgaatatagattcttttcttac
ataatatatcctaataatggtttcctgtccttctactcctccagtagagg
atataaaaatatctcataagaaagcgggctcttttacaagctaatgttct
tccttcctcgcctaaatgaacttcccctcatttaattaaaacaaaaccta
gctttccaaaatatacatttgagaatagaaggcctcataaaaatatggct
atttggaagaatatggttattgttaagtgcaaggtaaattgtattattta
aagtctggaaaatgagaataaaaaccattgtgacttctccttactttcaa
gcaagctgttccacactacctgtgattctgtcagtagaggctgaacacag
tgcagcttgtgatcactttctgggtcttgctcagtttctggtggaaacaa

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_134259194_134260249
seq2: B6Ng01-279J21.g_66_1115 (reverse)

seq1  TTGTTTGTATCACCAGAAACCCTGAACCAAGA-CCAG-AAGTGATCACAA  48
      ||||||    |||||||||  ||| | ||||| |||| ||||||||||||
seq2  TTGTTT---CCACCAGAAA--CTG-AGCAAGACCCAGAAAGTGATCACAA  44

seq1  GCTGCACTGTGTTCAGCCTCTACTGACAGAATCACAGGTAGTGTGGAACC  98
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GCTGCACTGTGTTCAGCCTCTACTGACAGAATCACAGGTAGTGTGGAA-C  93

seq1  AGCTTGCTTGAAAGTAAGGAGAAGTCCACAATGG-TTTTATTCTCATTTT  147
      ||||||||||||||||||||||||| |||||||| |||||||||||||||
seq2  AGCTTGCTTGAAAGTAAGGAGAAGT-CACAATGGTTTTTATTCTCATTTT  142

seq1  CCAGACTTTAAATAATAACAATTTACCTTGCACTTAACAATAACCATATT  197
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CCAGACTTTAAATAAT-ACAATTTACCTTGCACTTAACAATAACCATATT  191

seq1  CTTCCAAATAGCCATATTTTTATGAGGCCTTCTATTCTCAAATGTATATT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAAATAGCCATATTTTTATGAGGCCTTCTATTCTCAAATGTATATT  241

seq1  TTGGAAAGCTAGGTTTTGTTTTAATTAAATGAGGGGAAGTTCATTTAGGC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAAGCTAGGTTTTGTTTTAATTAAATGAGGGGAAGTTCATTTAGGC  291

seq1  GAGGAAGGAAGAACATTAGCTTGTAAAAGAGCCCGCTTTCTTATGAGATA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAGGAAGAACATTAGCTTGTAAAAGAGCCCGCTTTCTTATGAGATA  341

seq1  TTTTTATATCCTCTACTGGAGGAGTAGAAGGACAGGAAACCATTATTAGG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATATCCTCTACTGGAGGAGTAGAAGGACAGGAAACCATTATTAGG  391

seq1  ATATATTATGTAAGAAAAGAATCTATATTCAATAAAAGGGGGAAATCCTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTATGTAAGAAAAGAATCTATATTCAATAAAAGGGGGAAATCCTT  441

seq1  TCCCAGTACCAACTGGAAGAGGTACTGTGACCATTATGATCTCAAAAAGT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGTACCAACTGGAAGAGGTACTGTGACCATTATGATCTCAAAAAGT  491

seq1  TATATCAAGGTGAATGTTTTAATCAGAGAAATTGAAAGAAGAGATTAATT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCAAGGTGAATGTTTTAATCAGAGAAATTGAAAGAAGAGATTAATT  541

seq1  TGTTAACTGAACACTGCAAGGGTAAAGGGGGTTTAATGGCTCTGATTAGG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAACTGAACACTGCAAGGGTAAAGGGGGTTTAATGGCTCTGATTAGG  591

seq1  CAGTAAGTGGGCTTTTCTCATCTCTACAGAAATGTAGCCGTGAAAGTAGG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAGTGGGCTTTTCTCATCTCTACAGAAATGTAGCCGTGAAAGTAGG  641

seq1  CTGAGTATTCAAATTCAGAAATTGGGCACAAGAAAGAACCCTGTAATGAG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTATTCAAATTCAGAAATTGGGCACAAGAAAGAACCCTGTAATGAG  691

seq1  AGGAATCATATGACACATGAATGAATAGCTGAACTTGTGAAATATTCCCC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATCATATGACACATGAATGAATAGCTGAACTTGTGAAATATTCCCC  741

seq1  AAAGAACCATCAGAATAGGTTTGATTCTGATGTGTCTGTGGTTGGCCAAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAACCATCAGAATAGGTTTGATTCTGATGTGTCTGTGGTTGGCCAAT  791

seq1  TAGATGTGGTCTTGCTCTGTGGTAGAGGGCATAGACTCACCAGTATTGAC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGTGGTCTTGCTCTGTGGTAGAGGGCATAGACTCACCAGTATTGAC  841

seq1  TCATTCCAGAGTCTGATTCAATGAAGCCGATACTGGTGCCTGGACATGGA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCCAGAGTCTGATTCAATGAAGCCGATACTGGTGCCTGGACATGGA  891

seq1  AAACTTCAGTGATGTCTCCTACCTCTCAGAAATCCCATTTGGGCCAAGAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTCAGTGATGTCTCCTACCTCTCAGAAATCCCATTTGGGCCAAGAT  941

seq1  TGTGACAAGTGCCTACCATTGTCCAGACTGAATATAAACTTGTGCCTGTT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACAAGTGCCTACCATTGTCCAGACTGAATATAAACTTGTGCCTGTT  991

seq1  TATTTTTCCAGTGTACATGGGAGGAGCAGACAGGTTTGTAAGTCATGTGG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTCCAGTGTACATGGGAGGAGCAGACAGGTTTGTAAGTCATGTGG  1041

seq1  AGAGAATTC  1056
      |||||||||
seq2  AGAGAATTC  1050