BAC Information

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BAC

Clone NameB6Ng01-280G12
Chromosome2 (Build37)
Map Location 131,537,716 - 131,705,824
singlet/doubletdoublet
Overlap genenone
Upstream gene4930402H24Rik, LOC100043766, C030014O09Rik, LOC627316, Atrn, LOC100043768, Gfra4, Adam33, Siglec1, LOC100043457, Hspa12b, 1700037H04Rik, Spef1, Cenpb, Cdc25b, 2310035K24Rik, D430028G21Rik, Pank2, Rnf24, LOC100043463, Smox, Adra1d
Downstream geneLamr1-ps1, Prnp, Prnd, Rassf2, Slc23a2, LOC626513, LOC100043470, EG329521, 5730494N06Rik, Pcna, Cds2, Prokr2, 1700026D11Rik, Prei4, LOC100043781, LOC383801, LOC668906, Chgb, 3300001M20Rik, Mcm8, Crls1, B430119L13Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-280G12.bB6Ng01-280G12.g
ACCGA080142GA080143
length1,089150
definitionB6Ng01-280G12.b B6Ng01-280G12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(131,537,716 - 131,538,804)(131,705,675 - 131,705,824)
sequence
gaattctttgagagaagaaaatatgccctttaaccttctgctccagcagt
gaatgcttgtagaaaaatgccatgggtcacattccatccaaatgcctgct
aacaaggtcaactcaccccacatttcatggtcattccagagggaagagcc
agcctacatttcatttcaacatgagtgagtgtttattgcagaaggttcta
gccctggcctgttgaacaacccctgagtagtctatggaatcccatgcttt
cttacatctgtccttcatttcttcctaggagattgtctctgacacttccc
ttctttctatcacattgatgcttccttcttgagccttggtttgtccaagc
tagattcaaaagtggaatcaacgttcttggaatggtgattgatgctcttt
ttaatctgaggataatattggaagttttaattaaatgccaaaacaattat
caaggaatttgtttagagaagaagtctggaagtttgtgtcaatggaagaa
gatatttgtgccttcagtcagatcttaaagataacaaggctctccacctg
cctacaggaggacccaatgacagactttagtagcagtccaaaaacctgcc
ttagttatatcatccctggttccctctagagcctctttagcctgagactc
ttgacagatctgccatggcctagataatccagctgtgatgatccggtact
aaacacactaaaggtgacagagttgactctgaaagtggcaaagcccaaga
taaaaaccatctatgaacacaatatacttttccaaatatgtttgcatttt
tacaccacctttttcagatattgcactcaccacgtactctccctcatgca
aaggtgttgcttgctgctgtggattagagatgtaatctcatgtgaacagt
tgtccaggcaagttcacaagctcctgaagtgggtctttatgctcatcctc
ttgatcaaatccctagtttcaacaaagcatgaggtcctagttaacacacc
actcctttcagaggagtgagtttggagatgatagggtagagaatgtcttg
ggaacagttactcttatctgggggttaaataaaaaagga
tcattgcactgggggcttgtctctatggccaagagaatttggcagaatca
atcaataatctatcacccttgagattagggtatgaagacacagtggctta
ttttgccctctctctctctctctctctctctctctctctctctctctctc

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_131537716_131538804
seq2: B6Ng01-280G12.b_45_1133

seq1  GAATTCTTTGAGAGAAGAAAATATGCCCTTTAACCTTCTGCTCCAGCAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGAGAGAAGAAAATATGCCCTTTAACCTTCTGCTCCAGCAGT  50

seq1  GAATGCTTGTAGAAAAATGCCATGGGTCACATTCCATCCAAATGCCTGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCTTGTAGAAAAATGCCATGGGTCACATTCCATCCAAATGCCTGCT  100

seq1  AACAAGGTCAACTCACCCCACATTTCATGGTCATTCCAGAGGGAAGAGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGGTCAACTCACCCCACATTTCATGGTCATTCCAGAGGGAAGAGCC  150

seq1  AGCCTACATTTCATTTCAACATGAGTGAGTGTTTATTGCAGAAGGTTCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTACATTTCATTTCAACATGAGTGAGTGTTTATTGCAGAAGGTTCTA  200

seq1  GCCCTGGCCTGTTGAACAACCCCTGAGTAGTCTATGGAATCCCATGCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGGCCTGTTGAACAACCCCTGAGTAGTCTATGGAATCCCATGCTTT  250

seq1  CTTACATCTGTCCTTCATTTCTTCCTAGGAGATTGTCTCTGACACTTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACATCTGTCCTTCATTTCTTCCTAGGAGATTGTCTCTGACACTTCCC  300

seq1  TTCTTTCTATCACATTGATGCTTCCTTCTTGAGCCTTGGTTTGTCCAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTATCACATTGATGCTTCCTTCTTGAGCCTTGGTTTGTCCAAGC  350

seq1  TAGATTCAAAAGTGGAATCAACGTTCTTGGAATGGTGATTGATGCTCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTCAAAAGTGGAATCAACGTTCTTGGAATGGTGATTGATGCTCTTT  400

seq1  TTAATCTGAGGATAATATTGGAAGTTTTAATTAAATGCCAAAACAATTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCTGAGGATAATATTGGAAGTTTTAATTAAATGCCAAAACAATTAT  450

seq1  CAAGGAATTTGTTTAGAGAAGAAGTCTGGAAGTTTGTGTCAATGGAAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAATTTGTTTAGAGAAGAAGTCTGGAAGTTTGTGTCAATGGAAGAA  500

seq1  GATATTTGTGCCTTCAGTCAGATCTTAAAGATAACAAGGCTCTCCACCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTTGTGCCTTCAGTCAGATCTTAAAGATAACAAGGCTCTCCACCTG  550

seq1  CCTACAGGAGGACCCAATGACAGACTTTAGTAGCAGTCCAAAAACCTGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACAGGAGGACCCAATGACAGACTTTAGTAGCAGTCCAAAAACCTGCC  600

seq1  TTAGTTATATCATCCCTGGTTCCCTCTAGAGCCTCTTTAGCCTGAGACTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTATATCATCCCTGGTTCCCTCTAGAGCCTCTTTAGCCTGAGACTC  650

seq1  TTGACAGATCTGCCATGGCCTAGATAATCCAGCTGTGATGATCCGGTACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAGATCTGCCATGGCCTAGATAATCCAGCTGTGATGATCCGGTACT  700

seq1  AAACACACTAAAGGTGACAGAGTTGACTCTGAAAGTGGCAAAGCCCAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACACTAAAGGTGACAGAGTTGACTCTGAAAGTGGCAAAGCCCAAGA  750

seq1  TAAAAACCATCTATGAACACAATATACTTTTCCAAATATGTTTGCATTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACCATCTATGAACACAATATACTTTTCCAAATATGTTTGCATTTT  800

seq1  TACACCACCTTTTTCAGATATTGCACTCACCACGTACTCTCCCTCATGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACCACCTTTTTCAGATATTGCACTCACCACGTACTCTCCCTCATGCA  850

seq1  AAGGTGTTGCTTGCTGCTGTGGATTAGAGATGTAATCTCATGTGAACAG-  899
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AAGGTGTTGCTTGCTGCTGTGGATTAGAGATGTAATCTCATGTGAACAGT  900

seq1  TGTCCAGGCAAGTTCACAAGCTCCTGAAGTGGGTCTTTATGCTCATCCTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAGGCAAGTTCACAAGCTCCTGAAGTGGGTCTTTATGCTCATCCTC  950

seq1  TTGATCAAATCCCTAGTCTCCAACAAAGCATGAGGTCCTAG-TAACACA-  997
      ||||||||||||||||| | ||||||||||||||||||||| ||||||| 
seq2  TTGATCAAATCCCTAGT-TTCAACAAAGCATGAGGTCCTAGTTAACACAC  999

seq1  CACTCC-TTCAGAGGAGTGGAGTTTGGAGATGATAGGGTAGAGAA-GTCT  1045
      |||||| ||||||||||| |||||||||||||||||||||||||| ||||
seq2  CACTCCTTTCAGAGGAGT-GAGTTTGGAGATGATAGGGTAGAGAATGTCT  1048

seq1  TGGGATACAGTTACTCCTAATTCAGGGGGTTAAAAAAAAAAGGA  1089
      ||||| |||||||||| ||  || |||||||||| |||||||||
seq2  TGGGA-ACAGTTACTCTTA--TCTGGGGGTTAAATAAAAAAGGA  1089

seq1: chr2_131705675_131705824
seq2: B6Ng01-280G12.g_73_222 (reverse)

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGCAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGCAAAA  50

seq1  TAAGCCACTGTGTCTTCATACCCTAATCTCAAGGGTGATAGATTATTGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCACTGTGTCTTCATACCCTAATCTCAAGGGTGATAGATTATTGAT  100

seq1  TGATTCTGCCAAATTCTCTTGGCCATAGAGACAAGCCCCCAGTGCAATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCTGCCAAATTCTCTTGGCCATAGAGACAAGCCCCCAGTGCAATGA  150