BAC Information

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BAC

Clone NameB6Ng01-280N13
Chromosome2 (Build37)
Map Location 137,650,769 - 137,651,804
singlet/doubletsinglet
Overlap genenone
Upstream geneMkks, 2210009G21Rik, Jag1
Downstream geneBtbd3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-280N13.bB6Ng01-280N13.g
ACCGA080473GA080474
length1,1301,031
definitionB6Ng01-280N13.b B6Ng01-280N13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctccacccaacagcttaagtggggaaattgaagtatcaattgggc
tatctcctcacctggaatttctggttccaacttatttaggttgtcagtag
aattaaattagttgtgactcaaggactaaacattatctccccttcttttt
ctgactactgttaagaattgctttcagctgtgagaggccacacttctgtc
ccagtgggagtggcctcctcacaacatcacagtgtcctaacctcaagatg
gtagggcaatctctttcttttagatagagttatgttaagggattatgtgt
taaggtcaggcataggccctgataatcttttttattaattgaagagttaa
ttctatgagaccataactatattgccaaaatcatttctaattgttgtgta
atataatctaattaaagagtgatgccacatcatgtctccaaaccccaacc
tgagacaagggtttagacaccaaccaaagagcatacacagactggaccta
agtcccgcacatatagccctgcagatacttgatgtgccagagtggttggg
ctacctaagggttaccaccctatcagaagagaaggggagagggcacaggg
gaaggtctgtgtgagggaggaccaggagaatgggcagcaattaggatgaa
aagtgaattttttaaaaaagatactgagtttgctacattatgtaaaagat
aactgaatattgtcaactattcaagtaaaaatgcaactaacaaataaaag
tgcatgtggcaaacatctgtctccatatagacgtgaatgatgtttgttgt
ctatagaaagactgatatgatgtttcttatctataattgaaggggtataa
tattcattgtatacatatagaggtgaataatatttgctgactagagatgg
tagtgtatgacatttattatctacagctggaggtaaacgttgttttctaa
atttaatcctgctttcaaactttctatgattataatatcattttaataca
taaatatttaatggctctgtaccccatttgtatttgcgtatttggtttct
aggagtctaacttcctgagttcattgtactttttggattagccttcttat
tctatcaatatattagaggttaggttcact

gaattcttgctgattggtggggacatcaagttccttgaggaaaatttcat
ctttaccatcaggatatctaatttattcttcttgttgtttctttcttgtt
catgacttcctagaaaacttctaccaatagcaactatcactaccaccacc
aaccaataacaaccaacaacaacccaactgattcttggagttgaatttct
ataacctctgaaaagaccccagaattccagcagtcacacacttgaaaaaa
aaatgtctgcagctggcaaaaatcacattcctgctagagcatgagaaaaa
tcatagtctgctgctatggacaatctaaagaaaatcacccagggtccaga
ttttgtttagatatttaaacctttagcttaaatttgtacctatcacttta
ttaaactaacagaaaaacctaactggaccataatgttttgaaaatatttg
ccatgctgcagacaatgcaaaagaaaaagaataaaatgtaattatagagg
catatctaggggcatttagcttaagacgactttatccattaaaaattgaa
tgtggtttttatatgaaatctatgcaagtgtacctttggctactctgaac
aaactctggcatagttcaactaaaaatgtcaatgatttcccaaaatcaag
ttctctggatataggtaataaactcattagctgagtgttgagaagaaata
tgaaattttgataagaggcaactttcaagccaatgattattaaatttcag
ggcccagtgctctatttgatttcagaaagattaacaaggaatcacattat
tattgagttcctatgaacacagatggaaaaagtcagtggaggaagacgag
gctacccttcagcagttgcagacatgtatgcctgagatgacccagactaa
atgtcattgagaggagtcagatcacagatccatctttcacgatttgatat
tagattcacatgggtactttgaaaaaatacctagtacttgagttcagccc
ttgtgatctgattcactgtcttgggtgtggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_137650769_137651804
seq2: B6Ng01-280N13.g_68_1098

seq1  GAATTCTTGCTGATTGGTGGGGACATCAAGTTCCTTGAGGAAAATTTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGCTGATTGGTGGGGACATCAAGTTCCTTGAGGAAAATTTCAT  50

seq1  CTTTACCATCAGGATATCTAATTTATTCTTCTTGTTGTTTCTTTCTTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACCATCAGGATATCTAATTTATTCTTCTTGTTGTTTCTTTCTTGTT  100

seq1  CATGACTTCCTAGAAAACTTCTACCAATAGCAACTATCACTACCACCACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACTTCCTAGAAAACTTCTACCAATAGCAACTATCACTACCACCACC  150

seq1  AACCAATAACAACCAACAACAACCCAACTGATTCTTGGAGTTGAATTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAATAACAACCAACAACAACCCAACTGATTCTTGGAGTTGAATTTCT  200

seq1  ATAACCTCTGAAAAGACCCCAGAATTCCAGCAGTCACACACTTGAAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCTCTGAAAAGACCCCAGAATTCCAGCAGTCACACACTTGAAAAAA  250

seq1  AAATGTCTGCAGCTGGCAAAAATCACATTCCTGCTAGAGCATGAGAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTCTGCAGCTGGCAAAAATCACATTCCTGCTAGAGCATGAGAAAAA  300

seq1  TCATAGTCTGCTGCTATGGACAATCTAAAGAAAATCACCCAGGGTCCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGTCTGCTGCTATGGACAATCTAAAGAAAATCACCCAGGGTCCAGA  350

seq1  TTTTGTTTAGATATTTAAACCTTTAGCTTAAATTTGTACCTATCACTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTAGATATTTAAACCTTTAGCTTAAATTTGTACCTATCACTTTA  400

seq1  TTAAACTAACAGAAAAACCTAACTGGACCATAATGTTTTGAAAATATTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACTAACAGAAAAACCTAACTGGACCATAATGTTTTGAAAATATTTG  450

seq1  CCATGCTGCAGACAATGCAAAAGAAAAAGAATAAAATGTAATTATAGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCTGCAGACAATGCAAAAGAAAAAGAATAAAATGTAATTATAGAGG  500

seq1  CATATCTAGGGGCATTTAGCTTAAGACGACTTTATCCATTAAAAATTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCTAGGGGCATTTAGCTTAAGACGACTTTATCCATTAAAAATTGAA  550

seq1  TGTGGTTTTTATATGAAATCTATGCAAGTGTACCTTTGGCTACTCTGAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTTTTTATATGAAATCTATGCAAGTGTACCTTTGGCTACTCTGAAC  600

seq1  AAACTCTGGCATAGTTCAACTAAAAATGTCAATGATTTCCCAAAATCAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCTGGCATAGTTCAACTAAAAATGTCAATGATTTCCCAAAATCAAG  650

seq1  TTCTCTGGATATAGGTAATAAACTCATTAGCTGAGTGTTGAGAAGAAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGGATATAGGTAATAAACTCATTAGCTGAGTGTTGAGAAGAAATA  700

seq1  TGAAATTTTGATAAGAGGCAACTTTCAAGCCAATGATTATTAAATTTCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTTTGATAAGAGGCAACTTTCAAGCCAATGATTATTAAATTTCAG  750

seq1  GGCCCAGTGCTCTATTTGATTTCAGAAAGATTAACAAGGAATCACATTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCAGTGCTCTATTTGATTTCAGAAAGATTAACAAGGAATCACATTAT  800

seq1  TATTGAGTTCCTATGAAACACAGATGGAAAAAGTCAGTGGAGGAAGACGA  850
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TATTGAGTTCCTATG-AACACAGATGGAAAAAGTCAGTGGAGGAAGACGA  849

seq1  GGCTACCCTTCAGCAGTTGCAGACATGTATGCCTGAGATGACCCAGACTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTACCCTTCAGCAGTTGCAGACATGTATGCCTGAGATGACCCAGACTA  899

seq1  AATGTCATTGAGAGGAGTCAAGATCACAGATCCATCTTCCACGATTTGAT  950
      ||||||||||||||||||| |||||||||||||||||| |||||||||||
seq2  AATGTCATTGAGAGGAGTC-AGATCACAGATCCATCTTTCACGATTTGAT  948

seq1  ATTAGATTCACATGGGTACTTTG-AAAAATACCTAGTACTTGAGTTCCAG  999
      ||||||||||||||||||||||| |||||||||||||||||||||| |||
seq2  ATTAGATTCACATGGGTACTTTGAAAAAATACCTAGTACTTGAGTT-CAG  997

seq1  CCCTTGTGAATCTGATTCCACTGTCCTGGGGTGTGGC  1036
      |||||||| |||||||| |||||| || |||||||||
seq2  CCCTTGTG-ATCTGATT-CACTGT-CTTGGGTGTGGC  1031


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