BAC Information

Click to search

BAC

Clone NameB6Ng01-281G10
Chromosome2 (Build37)
Map Location 112,290,816 - 112,291,683
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr1288, Olfr1289, Olfr1290, GA_x5J8B7W4T2P-95628-96096, Olfr1292-ps1, Olfr1293, Olfr1294, Olfr1295, LOC668822, Olfr1297, Olfr1298, Olfr1299, Olfr1300-ps1, Olfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825, Olfr1305, Olfr1306, LOC668827, Olfr1307, Olfr1308, Olfr1309, LOC433463, Olfr1310, Olfr1311, Olfr1312, Olfr1313, Olfr1314, Olfr1315-ps1, Olfr1316, Olfr1317, Olfr1318, GA_x5J8B7W3P0G-705890-705633, LOC100043187, Agpat7, Nut, Nola3, Slc12a6, Tmem85, EG668839, 2410042D21Rik
Downstream gene2900064A13Rik, Chrm5, Aven, Ryr3, 4930563P21Rik, Fmn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-281G10.g
ACCGA080890
length868
definitionB6Ng01-281G10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagggtttggcaaacctcaacccaactcttgctcttggccagct
ccccactccccactccccactcccagtccctcagctccctggccccacaa
tctttgaccttttctccccatctgtcttagtcaaggtttctattcctgca
taaacatcatgacaaagaagcacttggggaggaaaggatttattcagctt
acacttccatactgctgttcatcaccaaaggaagtcaggactggaactca
aacaggttaggaagcaggagctgatgcagaggccatggagggatgttctt
tactggcttgcttccactggcttgctcaacttgctctcttatagaaccaa
gactaccaatccagagatggtcccacccacaaggggcctttcccccttga
tcacaaattgaggaaatgccttacagctggatctcgtggaggcatttccc
caactgatgctcctttctctgtgataactccagctgtgtcaagttgacac
ccaaaaccagccagtacaccatccttctcctaaatgcaacaaccaaggtc
tctgttctctgcctcaccacgaatgggatctgcattgtgttgcagactta
ggggaaaaccatgtgttttgcaaggaagacattccatcaaagacaaaagc
gccaaaatggcatcactgatcaccatgttcactttgccggagggctgagc
cctcagaccgtttcagggttatttcaaatccaactagggcagacataacc
attattgaatcaccgataaaatatgagactgcgtagcagtgccccaatcc
ataactgctagagtggttttagaaaacacaaagtaaactaacacctctat
aaaacgataaaatgttac
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_112290816_112291683
seq2: B6Ng01-281G10.g_64_931 (reverse)

seq1  GTAACATTTTTATCGTTTTATAGAGGTGTTAGTTTACTTTGTGTTTTCTA  50
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACA-TTTTATCGTTTTATAGAGGTGTTAGTTTACTTTGTGTTTTCTA  49

seq1  AAACCACTCTAGCAGTTAAGGATTGGGGCACTGCTACACAGTCTCATATT  100
      |||||||||||||||||| |||||||||||||||||| ||||||||||||
seq2  AAACCACTCTAGCAGTTATGGATTGGGGCACTGCTACGCAGTCTCATATT  99

seq1  TTAACGGTGATTCAATAATGGTTATGTCTGCCCTAGCTGGATTTGAAATA  150
      ||| |||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTATCGGTGATTCAATAATGGTTATGTCTGCCCTAGTTGGATTTGAAATA  149

seq1  ACCCTGAAACTGTCTGAGGGCTCAGCCCTCCGGCAAAGTGAACCTGGTGA  200
      |||||||||| |||||||||||||||||||||||||||||||| ||||||
seq2  ACCCTGAAACGGTCTGAGGGCTCAGCCCTCCGGCAAAGTGAACATGGTGA  199

seq1  TCAGTGATGCCATTTTGGCGCTTTTGTCTTTGATGGAATGTCTTCCTTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGATGCCATTTTGGCGCTTTTGTCTTTGATGGAATGTCTTCCTTGC  249

seq1  -AAACACATGGTTTTCCCCTAAGTCTGCAACACAATGCAGATCCCATTCG  299
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACATGGTTTTCCCCTAAGTCTGCAACACAATGCAGATCCCATTCG  299

seq1  TGGTGAGGCAGAGAACAGAGACCTTGGTTGTTGCATTTAGGAGAAGGATG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAGGCAGAGAACAGAGACCTTGGTTGTTGCATTTAGGAGAAGGATG  349

seq1  GTGTACTGGCTGGTTTTGGGTGTCAACTTGACACAGCTGGAGTTATCACA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTACTGGCTGGTTTTGGGTGTCAACTTGACACAGCTGGAGTTATCACA  399

seq1  GAGAAAGGAGCATCAGTTGGGGAAATGCCTCCACGAGATCCAGCTGTAAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGGAGCATCAGTTGGGGAAATGCCTCCACGAGATCCAGCTGTAAG  449

seq1  GCATTTCCTCAATTTGTGATCAAGGGGGAAAGGCCCCTTGTGGGTGGGAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTCCTCAATTTGTGATCAAGGGGGAAAGGCCCCTTGTGGGTGGGAC  499

seq1  CATCTCTGGACTGGTAGTCTTGGTTCTATAAGAGAGCAAGCTGAGCAAGC  549
      |||||||||| ||||||||||||||||||||||||||||| |||||||||
seq2  CATCTCTGGATTGGTAGTCTTGGTTCTATAAGAGAGCAAGTTGAGCAAGC  549

seq1  CAGTGGAAGCAAGCCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGAAGCAAGCCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGC  599

seq1  TCCTGCTTCCTAACCTGTTTGAGTTCCAGTCCTGACTTCCTTTGGTGATG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCTTCCTAACCTGTTTGAGTTCCAGTCCTGACTTCCTTTGGTGATG  649

seq1  AACAGCAGTATGGAAGTGTAAGCTGAATAAATCCTTTCCTCCCCAAGTGC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCAGTATGGAAGTGTAAGCTGAATAAATCCTTTCCTCCCCAAGTGC  699

seq1  TTCTTTGTCATGATGTTTCTGCAGGAATAGAAACCCTGACTAAGACAGAT  749
      |||||||||||||||||| |||||||||||||||| ||||||||||||||
seq2  TTCTTTGTCATGATGTTTATGCAGGAATAGAAACCTTGACTAAGACAGAT  749

seq1  GGGGAGAAAAGGTCAAAGATTGTGGGGCCAGGGAGCTGAGGGACTGGGAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGAAAAGGTCAAAGATTGTGGGGCCAGGGAGCTGAGGGACTGGGAG  799

seq1  TGGGGAGTGGGGAGTGGGGAGCTGGCCAAGAGCAAGAGTTGGGTTGAGGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAGTGGGGAGTGGGGAGCTGGCCAAGAGCAAGAGTTGGGTTGAGGT  849

seq1  TTGCCAAACCCTGGAATTC  868
      |||||||||||||||||||
seq2  TTGCCAAACCCTGGAATTC  868