BAC Information

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BAC

Clone NameB6Ng01-281O18
Chromosome2 (Build37)
Map Location 75,461,084 - 75,462,215
singlet/doubletsinglet
Overlap genenone
Upstream geneEvx2, Hoxd13, Hoxd12, Hoxd11, Hoxd10, Hoxd9, Hoxd8, 1700109F18Rik, Hoxd3, Hoxd4, LOC667804, Hoxd1, Mtx2, LOC667817, A330043C09Rik, LOC667739, LOC545423, LOC100040324
Downstream geneLOC667828, Hnrpa3, Nfe2l2, E030042O20Rik, LOC623453, Agps, Ttc30b, Ttc30a2, Ttc30a1, Pde11a, Cyct, Drbp1, Osbpl6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-281O18.bB6Ng01-281O18.g
ACCGA081274GA081275
length1,124301
definitionB6Ng01-281O18.b B6Ng01-281O18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactttgtagaccaggctggcctcgaacccagaaatcgcctgcct
ctgcctcccaaacgctgggattaaaggtgtgcgccaccaccgcccggcgg
ccattagctcttaatccttcccaaaaggaaggatttaatctttccatcaa
ctagggaccaagcattaaatacacaagcctgtgggggccacttcattcaa
tcaccacacgctgatcaggcagtacccacatgctgcccactagatccaga
gaagaccccttatagactggctcacctagtgcctgaacgacatggccaaa
taaagaggatctattaagacaaatacccacccatggaaaaactctgaaga
aggccaggggtttctgcggggatcgggtgaataccaggttgtctatgccc
cgatgtttcaagggtcagtgaaagccatctgcacaaccggaatgtataaa
cgaacccttaaccgaagcccctgaacaatggctctaccttggagtctccc
tcctcagcttgaccatcaggcagactgtccatgatgggaagagaccactg
ctgaagggccagttggagcataggagcatggcaggctttgcctttctctc
ccatcccctctgccttgcttgaagccattagattcctaaagctagccaca
aaggtctagttccttacttggccacttcctcctcctgaggctgacctcaa
aagtccagctatcaaagtattgaagtctagcaatcaaaacctccctttgg
ctcatctaattagcatgtccagttaaaatttaagcaccttatcctaacac
tgagtttcccatttcatcttttataaaatggcattttgctataggccaca
tgtctcctctctgtccagaggcagccctttgtcctctgagacaaatacct
ctcctcctttctcccttgttccctttccccttcgcccttgtcctctatcc
ctgacttgtctcttattccttgccttctgtcctctgggcaaataaatttc
ttttgtgctgagactttggtcttgctccaggagccattactttccttaca
ctactgactgggagaggttactatcagcaaaggatacatgcgcacaaaat
gtgacagaaacgggcgaaccaaaa
aactgctccctttattcaggcccttgggtaaaagttgacctgagtcagac
aagattgccctgtctatggctgtcttagttacatttctttgctatgaaaa
gacaccatagccgggcagtggtggcgcacacctttattcccagcacttgg
gaggcagaggcaggtagatttctgagttggaggccagcctggtctacaga
gtgagttccaggacacccagagctatacagagaaaccgtgtctcaaaaac
caaaaacaaacaaacaaacaaacaaaaaacaacaaacaacaaaaaaagaa
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_75461084_75462215
seq2: B6Ng01-281O18.b_51_1174

seq1  GAATTCACTTTGTAGACCAGGCTGGCCTCGAACCCAGAAATCGCCTGCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTGTAGACCAGGCTGGCCTCGAACCCAGAAATCGCCTGCCT  50

seq1  CTGCCTCCCAAACGCTGGGATTAAAGGTGTGCGCCACCACCGCCCGGCGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCCCAAACGCTGGGATTAAAGGTGTGCGCCACCACCGCCCGGCGG  100

seq1  CCATTAGCTCTTAATCCTTCCCAAAAGGAAGGATTTAATCTTTCCATCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTAGCTCTTAATCCTTCCCAAAAGGAAGGATTTAATCTTTCCATCAA  150

seq1  CTAGGGACCAAGCATTAAATACACAAGCCTGTGGGGGCCACTTCATTCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGACCAAGCATTAAATACACAAGCCTGTGGGGGCCACTTCATTCAA  200

seq1  TCACCACACGCTGATCAGGCAGTACCCACATGCTGCCCACTAGATCCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCACACGCTGATCAGGCAGTACCCACATGCTGCCCACTAGATCCAGA  250

seq1  GAAGACCCCTTATAGACTGGCTCACCTAGTGCCTGAACGACATGGCCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACCCCTTATAGACTGGCTCACCTAGTGCCTGAACGACATGGCCAAA  300

seq1  TAAAGAGGATCTATTAAGACAAATACCCACCCATGGAAAAACTCTGAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAGGATCTATTAAGACAAATACCCACCCATGGAAAAACTCTGAAGA  350

seq1  AGGCCAGGGGTTTCTGCGGGGATCGGGTGAATACCAGGTTGTCTATGCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAGGGGTTTCTGCGGGGATCGGGTGAATACCAGGTTGTCTATGCCC  400

seq1  CGATGTTTCAAGGGTCAGTGAAAGCCATCTGCACAACCGGAATGTATAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATGTTTCAAGGGTCAGTGAAAGCCATCTGCACAACCGGAATGTATAAA  450

seq1  CGAACCCTTAACCGAAGCCCCTGAACAATGGCTCTACCTTGGAGTCTCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAACCCTTAACCGAAGCCCCTGAACAATGGCTCTACCTTGGAGTCTCCC  500

seq1  TCCTCAGCTTGACCATCAGGCAGACTGTCCATGATGGGAAGAGACCACTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAGCTTGACCATCAGGCAGACTGTCCATGATGGGAAGAGACCACTG  550

seq1  CTGAAGGGCCAGTTGGAGCATAGGAGCATGGCAGGCTTTGCCTTTCTCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGGGCCAGTTGGAGCATAGGAGCATGGCAGGCTTTGCCTTTCTCTC  600

seq1  CCATCCCCTCTGCCTTGCTTGAAGCCATTAGATTCCTAAAGCTAGCCACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCCCTCTGCCTTGCTTGAAGCCATTAGATTCCTAAAGCTAGCCACA  650

seq1  AAGGTCTAGTTCCTTACTTGGCCACTTCCTCCTCCTGAGGCTGACCTCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCTAGTTCCTTACTTGGCCACTTCCTCCTCCTGAGGCTGACCTCAA  700

seq1  AAGTCCAGCTATCAAAGTATTGAAGTCTAGCAATCAAAACCTCCCTTTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCAGCTATCAAAGTATTGAAGTCTAGCAATCAAAACCTCCCTTTGG  750

seq1  CTCATCTAATTAGCATGTCCAGTTAAAA-TTAAGCACCTTATCCTAACAC  799
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CTCATCTAATTAGCATGTCCAGTTAAAATTTAAGCACCTTATCCTAACAC  800

seq1  TGAGTTTCCCATTTCATC-TTTATAAAATGGCATTTTGCTATAGGCCACA  848
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TGAGTTTCCCATTTCATCTTTTATAAAATGGCATTTTGCTATAGGCCACA  850

seq1  TGTCTCCTCTCTGTCCAGAGGCAGCCCTTTGTCCTCTGAGACAAATACCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCCTCTCTGTCCAGAGGCAGCCCTTTGTCCTCTGAGACAAATACCT  900

seq1  CTCCTCCTTTCTCCCTTGTTCCC-TTCCCCTTCGCCCTTGTCCTCTATCC  947
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CTCCTCCTTTCTCCCTTGTTCCCTTTCCCCTTCGCCCTTGTCCTCTATCC  950

seq1  CTGACTTTGTCTCTTATTCCTTGCCTTCTGTCCCTCTGGGGCAAATAAAT  997
      ||||| ||||||||||||||||||||||||| ||||| ||||||||||||
seq2  CTGAC-TTGTCTCTTATTCCTTGCCTTCTGT-CCTCT-GGGCAAATAAAT  997

seq1  TTCTTTTGTGCTGAGAACTTGGTCTTGCTCCCAGGAGCAATACTTTTCCT  1047
      ||||||||||||||||  ||||||||||| |||||||| ||   ||||||
seq2  TTCTTTTGTGCTGAGACTTTGGTCTTGCT-CCAGGAGCCATTACTTTCCT  1046

seq1  AACAACTACTGACCTGGGAGAGGTTAACTATCAAGCAAAGGATACATGGG  1097
       || |||||||| |||||||||||| |||||| |||||||||||||| | 
seq2  TAC-ACTACTGA-CTGGGAGAGGTT-ACTATC-AGCAAAGGATACAT-GC  1091

seq1  GCACAAAATGTGACAAGAAAAAGGGCGAACAAAAA  1132
      |||||||||||||||   ||| |||||||| ||||
seq2  GCACAAAATGTGACA--GAAACGGGCGAACCAAAA  1124