BAC Information

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BAC

Clone NameB6Ng01-282A05
Chromosome2 (Build37)
Map Location 126,806,347 - 126,964,709
singlet/doubletdoublet
Overlap geneAp4e1, Blvra, Ncaph
Upstream geneGalk2, Fgf7, Dtwd1, Atp8b4, Slc27a2, Hdc, Gabpb1, Usp8, LOC100043714, Usp50, Trpm7, 2010106G01Rik
Downstream gene1700041B20Rik, 1810024B03Rik, LOC100043408, Ascc3l1, Ciao1, Tmem127, ENSMUSG00000074822, Stard7, Dusp2, Astl, Adra2b, A530057A03Rik, Fahd2a, Kcnip3, Prom2, Zfp661, Mrps5, Mal, LOC668892, Mall, Nphp1, 1500011K16Rik, Bub1, Acoxl, Bcl2l11
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282A05.bB6Ng01-282A05.g
ACCGA081341GA081342
length1,102661
definitionB6Ng01-282A05.b B6Ng01-282A05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(126,806,347 - 126,807,485)(126,964,049 - 126,964,709)
sequence
gaattcaaatcccagcaaccacatggtggctcacaaccatccgtaatgag
atctgatgttgccttctggggtgtctgatgacagctacagtgtacttaca
tataataaataaataaatcttaaaaaaaaaagaaagaaaagtcttctcac
aatataactatagctatgtatttatctaaaatcattttgtttactttttt
ctcttttaactctttgaaacagtcagacaatacactccaagtaacagctt
tttcttggatctgcgttctgcttctcctcctcccccccacccccaccccc
gattctgcatctagcatgcatttactcactttggggtgtgtgagtgtgtc
agcatgcacaagccaaggggcattggcaaaggtcagaggacacctgaggg
aactgctctctccttctgacctgtgcgacctggggaccatgctcgggtca
tcagcattgtcagcaggagcctctgttctctgaaccatcttgctggctct
gttatgtttctgtttttctttttgtttaagatctctgcaccaacataaca
tggaagcctcttgtcaagatgatgaactgaacggaagctttttgtcccat
tccatacatagacattttggactgaaacataaagaaatgcacagagcaag
aaaaagagatctaagtaaatcagagcaaggagaaatcaaagcttggctgc
tcagatgggaactaatctgactttttaggctgggagctgaggctgctgcc
ctggaccttgtgcctccccccaccccccttttttttttttttttggtttt
ttggttttttggttttttgagacagggtttctctgtgtaaccctggctgt
cctggaactcactctgtagaccaggttggcctcgaactcagaaatctgcc
tgcctctgcctccaagtgctgggattaaaggcttgtgccactagcctgcc
gtaccttgggctttcttaagtgcaagtcacgctctagatgtactgaacca
gcacgagaccaatggtatcctagcacttgcgatgaggacaggatcgatgt
ccaggtcatcttagctactagtggttcaggcagctgactacataaacatg
tt
gaattctagaaacgtatgtcaatctttgaaattcttgctacacagaggta
tagtattctccatgttacctgctttccaggtaaaaggatgcggtgatgcc
tctgtgctggtgggaattctgtttttaagatgtctgtagacttttgagaa
aactatctgcttctatattaactccaataaaaatgtatggaggctggtct
ctgtatgaactggaatctgttcactaacaacactggtacatacctttccc
aagaagttcttgtgactctcacagctcaggctggtgtatcctggtgtttc
tcaatgcaccttgaaccagtctgccctgtggtttccagtggcatggccac
tggccaggagggaaaaaaaactcataaagttaaggaaggtctaagttatt
aatttccacggtgcctaaacccagatttcagctaaattaaaagctcttag
taactacaaacagcacgctgtaggagtctgctggggcagaaagacggtgc
tgtgattgctacgtctgcagggttgtttctcatctgacagacaagaaaga
aaacgtgaaattatgagttggggggaaggctacaaagggaatagtcagca
aagcttgggtggggcagaaggtacagggtgtgtgtgtgtatgtgtctatg
tgggggtgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_126806347_126807485
seq2: B6Ng01-282A05.b_43_1144

seq1  GAATTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGAG  50

seq1  ATCTGATGTTGCCTTCTGGGGTGTCTGATGACAGCTACAGTGTACTTACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGATGTTGCCTTCTGGGGTGTCTGATGACAGCTACAGTGTACTTACA  100

seq1  TATAATAAATAAATAAATCTTAAAAAAAAAAGAAAGAAAAGTCTTCTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATAAATAAATAAATCTTAAAAAAAAAAGAAAGAAAAGTCTTCTCAC  150

seq1  AATATAACTATAGCTATGTATTTATCTAAAATCATTTTGTTTACTTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAACTATAGCTATGTATTTATCTAAAATCATTTTGTTTACTTTTTT  200

seq1  CTCTTTTAACTCTTTGAAACAGTCAGACAATACACTCCAAGTAACAGCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTAACTCTTTGAAACAGTCAGACAATACACTCCAAGTAACAGCTT  250

seq1  TTTCTTGGATCTGCGTTCTGCTTCTCCTCCTCCCCCCCACCCCCACCCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGGATCTGCGTTCTGCTTCTCCTCCTCCCCCCCACCCCCACCCCC  300

seq1  GATTCTGCATCTAGCATGCATTTACTCACTTTGGGGTGTGTGAGTGTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTGCATCTAGCATGCATTTACTCACTTTGGGGTGTGTGAGTGTGTC  350

seq1  AGCATGCACAAGCCAAGGGGCATTGGCAAAGGTCAGAGGACACCTGAGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGCACAAGCCAAGGGGCATTGGCAAAGGTCAGAGGACACCTGAGGG  400

seq1  AACTGCTCTCTCCTTCTGACCTGTGCGACCTGGGGACCATGCTCGGGTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCTCTCTCCTTCTGACCTGTGCGACCTGGGGACCATGCTCGGGTCA  450

seq1  TCAGCATTGTCAGCAGGAGCCTCTGTTCTCTGAACCATCTTGCTGGCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCATTGTCAGCAGGAGCCTCTGTTCTCTGAACCATCTTGCTGGCTCT  500

seq1  GTTATGTTTCTGTTTTTCTTTTTGTTTAAGATCTCTGCACCAACATAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGTTTCTGTTTTTCTTTTTGTTTAAGATCTCTGCACCAACATAACA  550

seq1  TGGAAGCCTCTTGTCAAGATGATGAACTGAACGGAAGCTTTTTGTCCCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGCCTCTTGTCAAGATGATGAACTGAACGGAAGCTTTTTGTCCCAT  600

seq1  TCCATACATAGACATTTTGGACTGAAACATAAAGAAATGCACAGAGCAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATACATAGACATTTTGGACTGAAACATAAAGAAATGCACAGAGCAAG  650

seq1  AAAAAGAGATCTAAGTAAATCAGAGCAAGGAGAAATCAAAGCTTGGCTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAGATCTAAGTAAATCAGAGCAAGGAGAAATCAAAGCTTGGCTGC  700

seq1  TCAGATGGGAACTAATCTGACTTTTTAGGCTGGGAGCTGAGGCTGCTGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATGGGAACTAATCTGACTTTTTAGGCTGGGAGCTGAGGCTGCTGCC  750

seq1  CTGGACCTTGTGCCTCCCCCCACCCCCCTTTTTTTTTTTTTTTTTTTTGG  800
      ||||||||||||||||||||||||||||    ||||||||||||||||||
seq2  CTGGACCTTGTGCCTCCCCCCACCCCCC----TTTTTTTTTTTTTTTTGG  796

seq1  TTTTTTGGTTTTTTGGTTTTTTGAGACAGGGTTTCTCTGTGTAACCCTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGGTTTTTTGGTTTTTTGAGACAGGGTTTCTCTGTGTAACCCTGG  846

seq1  CTGTCCTGGAACTCACTCTGTAGACCAGGTTGGCCTCGAACTCAGAAATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCTGGAACTCACTCTGTAGACCAGGTTGGCCTCGAACTCAGAAATC  896

seq1  TGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCTTGTGCCACTAGG  950
      ||||||||||||||| |||||||||||||||||||||||||||||||| |
seq2  TGCCTGCCTCTGCCT-CCAAGTGCTGGGATTAAAGGCTTGTGCCACTA-G  944

seq1  CCTGGCCGTACCTTGGGCTTTCTTAAAGTTGCAAAGTCACCGCTCTAAGA  1000
      ||| ||||||||||||||||||||||   ||| |||||| |||||||   
seq2  CCT-GCCGTACCTTGGGCTTTCTTAA--GTGC-AAGTCA-CGCTCTA--G  987

seq1  ATGTAACCTGGAACCAGGCACGAGGACACAAATGGGTAATCCTAGCACTT  1050
      |||||  || |||||| |||||||   || |||||   ||||||||||||
seq2  ATGTA--CT-GAACCA-GCACGAG---ACCAATGG--TATCCTAGCACTT  1028

seq1  GGCAGATGAGGGAGCAGGATCAGATGTTCAGGGTCATCCTAGGCTACCTA  1100
      |   |||||||   ||||||| ||||| || ||||||| || |||| |||
seq2  G--CGATGAGG--ACAGGATC-GATGTCCA-GGTCATCTTA-GCTA-CTA  1070

seq1  GTTAGTTTTCAGGCAGCCTGGACTACATAAAACCATGTT  1139
      ||     ||||||||||   |||||||||||  ||||||
seq2  GT---GGTTCAGGCAGC--TGACTACATAAA--CATGTT  1102

seq1: chr2_126964049_126964709
seq2: B6Ng01-282A05.g_70_730 (reverse)

seq1  CCCCACCCCCACATAGACACATACACACACACACCCTGTACCTTCTGCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACCCCCACATAGACACATACACACACACACCCTGTACCTTCTGCCC  50

seq1  CACCCAAGCTTTGCTGACTATTCCCTTTGTAGCCTTCCCCCCAACTCATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCAAGCTTTGCTGACTATTCCCTTTGTAGCCTTCCCCCCAACTCATA  100

seq1  ATTTCACGTTTTCTTTCTTGTCTGTCAGATGAGAAACAACCCTGCAGACG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCACGTTTTCTTTCTTGTCTGTCAGATGAGAAACAACCCTGCAGACG  150

seq1  TAGCAATCACAGCACCGTCTTTCTGCCCCAGCAGACTCCTACAGCGTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAATCACAGCACCGTCTTTCTGCCCCAGCAGACTCCTACAGCGTGCT  200

seq1  GTTTGTAGTTACTAAGAGCTTTTAATTTAGCTGAAATCTGGGTTTAGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTAGTTACTAAGAGCTTTTAATTTAGCTGAAATCTGGGTTTAGGCA  250

seq1  CCGTGGAAATTAATAACTTAGACCTTCCTTAACTTTATGAGTTTTTTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGGAAATTAATAACTTAGACCTTCCTTAACTTTATGAGTTTTTTTTC  300

seq1  CCTCCTGGCCAGTGGCCATGCCACTGGAAACCACAGGGCAGACTGGTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTGGCCAGTGGCCATGCCACTGGAAACCACAGGGCAGACTGGTTCA  350

seq1  AGGTGCATTGAGAAACACCAGGATACACCAGCCTGAGCTGTGAGAGTCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGCATTGAGAAACACCAGGATACACCAGCCTGAGCTGTGAGAGTCAC  400

seq1  AAGAACTTCTTGGGAAAGGTATGTACCAGTGTTGTTAGTGAACAGATTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACTTCTTGGGAAAGGTATGTACCAGTGTTGTTAGTGAACAGATTCC  450

seq1  AGTTCATACAGAGACCAGCCTCCATACATTTTTATTGGAGTTAATATAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCATACAGAGACCAGCCTCCATACATTTTTATTGGAGTTAATATAGA  500

seq1  AGCAGATAGTTTTCTCAAAAGTCTACAGACATCTTAAAAACAGAATTCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGATAGTTTTCTCAAAAGTCTACAGACATCTTAAAAACAGAATTCCC  550

seq1  ACCAGCACAGAGGCATCACCGCATCCTTTTACCTGGAAAGCAGGTAACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCACAGAGGCATCACCGCATCCTTTTACCTGGAAAGCAGGTAACAT  600

seq1  GGAGAATACTATACCTCTGTGTAGCAAGAATTTCAAAGATTGACATACGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAATACTATACCTCTGTGTAGCAAGAATTTCAAAGATTGACATACGT  650

seq1  TTCTAGAATTC  661
      |||||||||||
seq2  TTCTAGAATTC  661