BAC Information

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BAC

Clone NameB6Ng01-282D04
Chromosome2 (Build37)
Map Location 8,313,092 - 8,393,428
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100040648, LOC672230
Downstream geneLOC100040710
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282D04.bB6Ng01-282D04.g
ACCGA081478GA081479
length1,1621,056
definitionB6Ng01-282D04.b B6Ng01-282D04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,392,252 - 8,393,428)(8,313,092 - 8,314,144)
sequence
gaattctgcagctctaacagtgctgatttcttgcaagcagggggagtact
aaaggggacctcatctttgctggttagaaagcataaacaatatttatcca
aaactaatagagaaattcttgtggtatataagaattcatgaaaacttagt
gtactctgaaacacaaagtgatggcataacaacgtggtgttagtagtgaa
tgtttttagagataaaaacaataataaataatcaacagcaactacctctc
tgtcttgtagactaggaaagggctgaagcatactaagattcacaaaatca
tgaaattatctgtagctaactaagaattccaagagaggagaaagttgata
tttaaagggacataaaaaatacccgttaaccttgtacttattacattaac
ttaaactccatgagaatggttactttattaaccctgttttactttcatat
ttatgccaattatgtctcagagcctccaaaaagactgttaaatgtcttta
atagcatatctttgagacaattacttgatggcataatccagataattcaa
catgggcttgcaaccagaatactaaacttaaaaagaaacaacaaaacctt
gttgtccttggagaaatttgaatatctattctatattcatgactgctaaa
attcttgtatcagtttgagattggagatttgctgatgttgttttgcacaa
aggggggggggagagagacagacagacagacagacatatttagtcactgc
ctaatgggttaagggagtactttttaatataactaattcttttacctata
ttagcataaattgttatcctagattgctctccagagtcccctcttgtttc
tttcctttttctcccatctctgtccttttctttttctcctctgtctttca
ttattcccactaaaaaaaaagtagctcaattataactttgctttgtctca
caatgacatttggaaattattttctgtacttaatttgttaacagtagatt
ttttttcacatatgccaatatataacacatattgtaccatctgacagctt
ttgccatctggatgttactatctgcagcagtgcaaccttttttctagtct
agtgcctttctcattaaggtcatgtattgaatcattatacctaaaacaag
cttccctgaaaa

gaattccagtgttcattgaaaatcagactgctgatttttacaaactaaag
gaaacaaagagtctgctccatttctgatagaaagggcaatgaacctcagg
gtttgatttcactattgaacctttcaatatgtggcataatatattaattt
tccatttgcttaccacatacagtttcacttccattgtaagaatcacacac
gcagaataacattttatccttaaatatttagtagtcacagattctaaata
gtattttagttgcttatgtttaatttttcactataaatatctagggctga
aactcacttacacatattgaccttgtattgtgggagtttcaaagatttac
gtattttcttctaaatgattttatgatagttctttgggaggttgtttgtt
tggttttgggattttctacaaaaaaggaaaataaatataattttattctg
cattagttacctgtgcttccatatcaaagtacactagatgaggaaactga
ataaaaatttatcatctcactatttcagagtagaagaggtccaaagtcaa
atttccattatgctttgtaagttttgaacattgtgtaggaaaaatctccc
agttcttccttgttcatttatgtaaactcgaacttcactgtttaaagttt
tttagtgaaggagtagtgttttgtcttgttattttgtttggtttttgttt
gttatttttcccttgggacttcatatgccactggatgtggaacctacaat
cagtatattcattggtgctgatgaagatggaacagaaatatgtggtctgt
ccagctttctacccagtgctaagtgggcatttataaaagacaagaggaga
agtaaatgaaagcatatgtcattctgacaattagcttggattttcaaggc
atttcagtgtcaagttattttccttataaactcagtcatagttttaaagg
tgtttgatatacttcagttacagggaaaaccattgaggaatttggctgga
ggcacacatcatatgcagatttagcaacattttacacaagacggaattta
tgttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_8392252_8393428
seq2: B6Ng01-282D04.b_49_1210 (reverse)

seq1  TTTTCAGGG-AGTTTGTTTTTAGTTATAATTTGATTCAAATACATGGGCC  49
      ||||||||| || ||| |||||| |||||  |||||| ||||||| | ||
seq2  TTTTCAGGGAAGCTTG-TTTTAGGTATAA--TGATTC-AATACAT-GACC  45

seq1  TTTTAAATGGAGAAA-GCACTAGATTTAGAAAAAGTTTGCACTGCTTCCA  98
      ||   ||| |||||| |||||||| |   |||||| |||||||||| |  
seq2  TT---AAT-GAGAAAGGCACTAGACTAGAAAAAAGGTTGCACTGCTGC--  89

seq1  GGATAGTACATTCCAGATGGGCAAAAGCTTTGTCCAGATGGTACAATATG  148
       |||||||   ||||||| |||||||||| |   ||||||||||||||||
seq2  AGATAGTAACATCCAGAT-GGCAAAAGCTGT---CAGATGGTACAATATG  135

seq1  TGTTTTATATATTTTGGCATATGTG-AAAAAAATCTACTTGTTAACAAAT  197
      |||    ||||| |||||||||||| |||||||||||| |||||||||||
seq2  TGT----TATATATTGGCATATGTGAAAAAAAATCTAC-TGTTAACAAAT  180

seq1  TAAGTACAGAAAATAATTTCCAAATGTCATTGTGAGACAAAGC-AAGTTA  246
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TAAGTACAGAAAATAATTTCCAAATGTCATTGTGAGACAAAGCAAAGTTA  230

seq1  TAATTGAGCTAC-TTTTTTTTAGTGGGAATAATGAAAGACAGAGGAGAAA  295
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TAATTGAGCTACTTTTTTTTTAGTGGGAATAATGAAAGACAGAGGAGAAA  280

seq1  AAGAAAAGGACAGAGATGGGAGAAAAAGGAAAGAAACAAGAGGGGACTCT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAGGACAGAGATGGGAGAAAAAGGAAAGAAACAAGAGGGGACTCT  330

seq1  GGAGAGCAATCTAGGATAACAATTTATGCTAATATAGGTAAAAGAATTAG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGCAATCTAGGATAACAATTTATGCTAATATAGGTAAAAGAATTAG  380

seq1  TTATATTAAAAAGTACTCCCTTAACCCATTAGGCAGTGACTAAATATGTC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTAAAAAGTACTCCCTTAACCCATTAGGCAGTGACTAAATATGTC  430

seq1  TGTCTGTCTGTCTGTCTCTCTCCCCCCCCCCTTTGTGCAAAACAACATCA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTCTGTCTGTCTCTCTCCCCCCCCCCTTTGTGCAAAACAACATCA  480

seq1  GCAAATCTCCAATCTCAAACTGATACAAGAATTTTAGCAGTCATGAATAT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATCTCCAATCTCAAACTGATACAAGAATTTTAGCAGTCATGAATAT  530

seq1  AGAATAGATATTCAAATTTCTCCAAGGACAACAAGGTTTTGTTGTTTCTT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAGATATTCAAATTTCTCCAAGGACAACAAGGTTTTGTTGTTTCTT  580

seq1  TTTAAGTTTAGTATTCTGGTTGCAAGCCCATGTTGAATTATCTGGATTAT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGTTTAGTATTCTGGTTGCAAGCCCATGTTGAATTATCTGGATTAT  630

seq1  GCCATCAAGTAATTGTCTCAAAGATATGCTATTAAAGACATTTAACAGTC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCAAGTAATTGTCTCAAAGATATGCTATTAAAGACATTTAACAGTC  680

seq1  TTTTTGGAGGCTCTGAGACATAATTGGCATAAATATGAAAGTAAAACAGG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGAGGCTCTGAGACATAATTGGCATAAATATGAAAGTAAAACAGG  730

seq1  GTTAATAAAGTAACCATTCTCATGGAGTTTAAGTTAATGTAATAAGTACA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATAAAGTAACCATTCTCATGGAGTTTAAGTTAATGTAATAAGTACA  780

seq1  AGGTTAACGGGTATTTTTTATGTCCCTTTAAATATCAACTTTCTCCTCTC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTAACGGGTATTTTTTATGTCCCTTTAAATATCAACTTTCTCCTCTC  830

seq1  TTGGAATTCTTAGTTAGCTACAGATAATTTCATGATTTTGTGAATCTTAG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAATTCTTAGTTAGCTACAGATAATTTCATGATTTTGTGAATCTTAG  880

seq1  TATGCTTCAGCCCTTTCCTAGTCTACAAGACAGAGAGGTAGTTGCTGTTG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTTCAGCCCTTTCCTAGTCTACAAGACAGAGAGGTAGTTGCTGTTG  930

seq1  ATTATTTATTATTGTTTTTATCTCTAAAAACATTCACTACTAACACCACG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTATTATTGTTTTTATCTCTAAAAACATTCACTACTAACACCACG  980

seq1  TTGTTATGCCATCACTTTGTGTTTCAGAGTACACTAAGTTTTCATGAATT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTATGCCATCACTTTGTGTTTCAGAGTACACTAAGTTTTCATGAATT  1030

seq1  CTTATATACCACAAGAATTTCTCTATTAGTTTTGGATAAATATTGTTTAT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATATACCACAAGAATTTCTCTATTAGTTTTGGATAAATATTGTTTAT  1080

seq1  GCTTTCTAACCAGCAAAGATGAGGTCCCCTTTAGTACTCCCCCTGCTTGC  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCTAACCAGCAAAGATGAGGTCCCCTTTAGTACTCCCCCTGCTTGC  1130

seq1  AAGAAATCAGCACTGTTAGAGCTGCAGAATTC  1177
      ||||||||||||||||||||||||||||||||
seq2  AAGAAATCAGCACTGTTAGAGCTGCAGAATTC  1162


seq1: chr2_8313092_8314144
seq2: B6Ng01-282D04.g_69_1124

seq1  GAATTCCAGTGTTCATTGAAAATCAGACTGCTGATTTTTACAAACTAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTGTTCATTGAAAATCAGACTGCTGATTTTTACAAACTAAAG  50

seq1  GAAACAAAGAGTCTGCTCCATTTCTGATAGAAAGGGCAATGAACCTCAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAAAGAGTCTGCTCCATTTCTGATAGAAAGGGCAATGAACCTCAGG  100

seq1  GTTTGATTTCACTATTGAACCTTTCAATATGTGGCATAATATATTAATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGATTTCACTATTGAACCTTTCAATATGTGGCATAATATATTAATTT  150

seq1  TCCATTTGCTTACCACATACAGTTTCACTTCCATTGTAAGAATCACACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTTGCTTACCACATACAGTTTCACTTCCATTGTAAGAATCACACAC  200

seq1  GCAGAATAACATTTTATCCTTAAATATTTAGTAGTCACAGATTCTAAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAATAACATTTTATCCTTAAATATTTAGTAGTCACAGATTCTAAATA  250

seq1  GTATTTTAGTTGCTTATGTTTAATTTTTCACTATAAATATCTAGGGCTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTAGTTGCTTATGTTTAATTTTTCACTATAAATATCTAGGGCTGA  300

seq1  AACTCACTTACACATATTGACCTTGTATTGTGGGAGTTTCAAAGATTTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCACTTACACATATTGACCTTGTATTGTGGGAGTTTCAAAGATTTAC  350

seq1  GTATTTTCTTCTAAATGATTTTATGATAGTTCTTTGGGAGGTTGTTTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTCTTCTAAATGATTTTATGATAGTTCTTTGGGAGGTTGTTTGTT  400

seq1  TGGTTTTGGGATTTTCTACAAAAAAGGAAAATAAATATAATTTTATTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTGGGATTTTCTACAAAAAAGGAAAATAAATATAATTTTATTCTG  450

seq1  CATTAGTTACCTGTGCTTCCATATCAAAGTACACTAGATGAGGAAACTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGTTACCTGTGCTTCCATATCAAAGTACACTAGATGAGGAAACTGA  500

seq1  ATAAAAATTTATCATCTCACTATTTCAGAGTAGAAGAGGTCCAAAGTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAATTTATCATCTCACTATTTCAGAGTAGAAGAGGTCCAAAGTCAA  550

seq1  ATTTCCATTATGCTTTGTAAGTTTTGAACATTGTGTAGGAAAAATCTCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCATTATGCTTTGTAAGTTTTGAACATTGTGTAGGAAAAATCTCCC  600

seq1  AGTTCTTCCTTGTTCATTTATGTAAACTCGAACTTCACTGTTTAAAGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTCCTTGTTCATTTATGTAAACTCGAACTTCACTGTTTAAAGTTT  650

seq1  TTTAGTGAAGGAGTAGTGTTTTGTCTTGTTATTTTGTTTGGTTTTTGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTGAAGGAGTAGTGTTTTGTCTTGTTATTTTGTTTGGTTTTTGTTT  700

seq1  GTTATTTTTCCCTTGGGACTTCATATGCCACTGGATGTGGAACCTACAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTTTTCCCTTGGGACTTCATATGCCACTGGATGTGGAACCTACAAT  750

seq1  CAGTATATTCATTGGTGCTGATGAAGATGGAACAGAAATATGTGGTCTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATATTCATTGGTGCTGATGAAGATGGAACAGAAATATGTGGTCTGT  800

seq1  CCAGCTTTCTACCCAGTGCTAAGT-GGCATTTATAAAAGACAAGAGGAGA  849
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CCAGCTTTCTACCCAGTGCTAAGTGGGCATTTATAAAAGACAAGAGGAGA  850

seq1  AGTAAAATGAAAAGCAATATGTCATTCTGACAATTAGCTTGGA-TTTCAA  898
      ||| ||||| ||||| ||||||||||||||||||||||||||| ||||||
seq2  AGT-AAATG-AAAGC-ATATGTCATTCTGACAATTAGCTTGGATTTTCAA  897

seq1  GGCATTTTCAGTGTCAAGTTATTTTCCTTATAAAACTCAGTCATAGTTTT  948
      |||| |||||||||||||||||||||||||| ||||||||||||||||||
seq2  GGCA-TTTCAGTGTCAAGTTATTTTCCTTAT-AAACTCAGTCATAGTTTT  945

seq1  AAA-GTG-TTGATATAC-TCAGTTACAGGGAAAAC--ATGAGGAATT--G  991
      ||| ||| ||||||||| |||||||||||||||||   |||||||||  |
seq2  AAAGGTGTTTGATATACTTCAGTTACAGGGAAAACCATTGAGGAATTTGG  995

seq1  CTGGAGGCACCACATCATATGCAGATTTTAGC-ACATTTTACAAAGAACG  1040
      ||||||||| ||||||||||||||| |||||| |||||||||| |  |||
seq2  CTGGAGGCA-CACATCATATGCAGA-TTTAGCAACATTTTACACAAGACG  1043

seq1  GAATTTATGTTGG  1053
      |||||||||||||
seq2  GAATTTATGTTGG  1056


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