BAC Information

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BAC

Clone NameB6Ng01-282N07
Chromosome2 (Build37)
Map Location 48,505,092 - 48,655,668
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC383691, LOC100041457
Downstream geneLOC383692, Acvr2a, Orc4l, LOC100041508, Mbd5, LOC100042719, LOC666709, LOC435666, Epc2, Kif5c, 2310010M24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282N07.bB6Ng01-282N07.g
ACCGA081943GA081944
length1,170183
definitionB6Ng01-282N07.b B6Ng01-282N07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(48,505,092 - 48,506,280)(48,655,486 - 48,655,668)
sequence
gaattcaggagcacttgggaatagaaggcaaatattcagaacattctcat
ttcactttgtcacatgcaatggaggcaataaagaactcatacatcggttt
aaaagatattcactttctccaaacatgaagtcatctcatgcaacacgatg
atttgaacctttggactcaaacttaacactaaagaagatacttctagctc
ttgtttatcttttcttatagcacgtcaaaatctgataaatggggattatc
ccaaaatcctttcataactttcactaattacattcagagccatgatgtcc
aagggtcttagatctactttaatcctagtctttcaattgcagactgttgt
ggaacttaaattccatgtccagctgttggcacctcttgaagtaaactccc
atgaatttgataaacaggtctcttagaattctacactatttccttgaagt
cacttagctactatttgttaagctgccaataagtacaataatgagctagc
cctggaagctttgtggcattgaccatggctctagtcttcagatgtttggt
aagtctagagtcacctttctcagacccttccgtgactttatgaacttcaa
tcatatcccttctagtcttcatctttcatattatcccatccaaactaaag
acatctgaggatctgaacatttggaagcgttccctttcatttccagccaa
gataaaaatagaggttccattgtgctctcaaggaaaaaaaaaatctatgc
atttggtacttggagctgtctcaaaacatgggatcttacaaaataactct
ctgtagagggcataacaccaagagccagttaggtcgacaagagatccagg
gataaacacctgcatctagtctccgtatgaaaagacagctcttgccagca
gcagcctgtcagaggtgtggtgctgactcatttccctctttgtatgtgtt
gaaggaatgttgccagaagaggaaaggtacactatcccaaatatttcttc
cacaaacattttcttcttaactctgcataaatgcagctgattctttgttt
gatagacactgagatagtttcagtcagaaatattccttagcatgagtaga
aatgcatcgagctgttaatttcagtgtctagagctacatgcaatggcttc
aatcaactgtgcctccttac

tttgagtacttttaaagaaacttgcaaaatactataattttatagaagag
ggacaatcttgactgccaaaaacatctaagagtaataaagttataaatag
acacatcctaatttattgccctccttttcaaagatttctattacttttaa
attagtgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_48505092_48506280
seq2: B6Ng01-282N07.b_49_1218

seq1  GAATTCAGGAGCACTTGGGAATAGAAGGCAAATATTCAGAACATTCTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGAGCACTTGGGAATAGAAGGCAAATATTCAGAACATTCTCAT  50

seq1  TTCACTTTGTCACATGCAATGGAGGCAATAAAGAACTCATACATCGGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTTTGTCACATGCAATGGAGGCAATAAAGAACTCATACATCGGTTT  100

seq1  AAAAGATATTCACTTTCTCCAAACATGAAGTCATCTCATGCAACACGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATATTCACTTTCTCCAAACATGAAGTCATCTCATGCAACACGATG  150

seq1  ATTTGAACCTTTGGACTCAAACTTAACACTAAAGAAGATACTTCTAGCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAACCTTTGGACTCAAACTTAACACTAAAGAAGATACTTCTAGCTC  200

seq1  TTGTTTATCTTTTCTTATAGCACGTCAAAATCTGATAAATGGGGATTATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTATCTTTTCTTATAGCACGTCAAAATCTGATAAATGGGGATTATC  250

seq1  CCAAAATCCTTTCATAACTTTCACTAATTACATTCAGAGCCATGATGTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAATCCTTTCATAACTTTCACTAATTACATTCAGAGCCATGATGTCC  300

seq1  AAGGGTCTTAGATCTACTTTAATCCTAGTCTTTCAATTGCAGACTGTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTCTTAGATCTACTTTAATCCTAGTCTTTCAATTGCAGACTGTTGT  350

seq1  GGAACTTAAATTCCATGTCCAGCTGTTGGCACCTCTTGAAGTAAACTCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTTAAATTCCATGTCCAGCTGTTGGCACCTCTTGAAGTAAACTCCC  400

seq1  ATGAATTTGATAAACAGGTCTCTTAGAATTCTACACTATTTCCTTGAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTTGATAAACAGGTCTCTTAGAATTCTACACTATTTCCTTGAAGT  450

seq1  CACTTAGCTACTATTTGTTAAGCTGCCAATAAGTACAATAATGAGCTAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTAGCTACTATTTGTTAAGCTGCCAATAAGTACAATAATGAGCTAGC  500

seq1  CCTGGAAGCTTTGTGGCATTGACCATGGCTCTAGTCTTCAGATGTTTGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAAGCTTTGTGGCATTGACCATGGCTCTAGTCTTCAGATGTTTGGT  550

seq1  AAGTCTAGAGTCACCTTTCTCAGACCCTTCCGTGACTTTATGAACTTCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTAGAGTCACCTTTCTCAGACCCTTCCGTGACTTTATGAACTTCAA  600

seq1  TCATATCCCTTCTAGTCTTCATCTTTCATATTATCCCATCCAAACTAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATCCCTTCTAGTCTTCATCTTTCATATTATCCCATCCAAACTAAAG  650

seq1  ACATCTGAGGATCTGAACATTTGGAAGCGTTCCCTTTCATTTCCAGCCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTGAGGATCTGAACATTTGGAAGCGTTCCCTTTCATTTCCAGCCAA  700

seq1  GATAAAAATAGAGGTTCCATTGTGCTCTCAAGGAAAAAAAAAATCTATGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAAATAGAGGTTCCATTGTGCTCTCAAGGAAAAAAAAAATCTATGC  750

seq1  ATTTGGTACTTGGAGCTGTCTCAAAACATGGGATCTTACAAAATAACTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGTACTTGGAGCTGTCTCAAAACATGGGATCTTACAAAATAACTCT  800

seq1  CTGTAGAGGGCATAACACCAAGAGCCAGTTAGGTCGACAAGAGATCCAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGAGGGCATAACACCAAGAGCCAGTTAGGTCGACAAGAGATCCAGG  850

seq1  GATAAACACCTGCATCTAGTCTCCGTATGAAAAGACAGCTCTTGCCAGCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAACACCTGCATCTAGTCTCCGTATGAAAAGACAGCTCTTGCCAGCA  900

seq1  GCAGCCTGTCAGAGGTGTGGTGCTGACTCATTTCCCTCTTTGTATGTGTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCTGTCAGAGGTGTGGTGCTGACTCATTTCCCTCTTTGTATGTGTT  950

seq1  GAAGGAAATGTTGCCAGAAGAGGAAAGGTACACTATCCCAAAATATTTCT  1000
      ||||| ||||||||||||||||||||||||||||||||| ||||||||||
seq2  GAAGG-AATGTTGCCAGAAGAGGAAAGGTACACTATCCC-AAATATTTCT  998

seq1  TCCACAAAACATTTTCTTCCTTAACTTCTGCATAAATGCAGCTGATTCCT  1050
      ||||| |||||||||||| |||||| ||||||||||||||||||||| ||
seq2  TCCAC-AAACATTTTCTT-CTTAAC-TCTGCATAAATGCAGCTGATT-CT  1044

seq1  TTGTTTGAATAGACACTGAGGATAGTTTTCAAGTCAGAATATTTCCCTTT  1100
      ||||||| ||||||||||| ||||||||   ||||||||   ||||  ||
seq2  TTGTTTG-ATAGACACTGA-GATAGTTT--CAGTCAGAAATATTCC--TT  1088

seq1  AGCATGAGTTAGAAAATGCACCCGAGCTGTTTATTTTCCAGTTGTCTAGA  1150
      |||||||| ||| |||||||  ||||||||| ||||  ||| ||||||||
seq2  AGCATGAG-TAG-AAATGCA-TCGAGCTGTTAATTT--CAG-TGTCTAGA  1132

seq1  GCTACATGCACATGGCTTCAATCACACTGTG-CTCCTTAC  1189
      |||||||||| ||||||||||||| |||||| ||||||||
seq2  GCTACATGCA-ATGGCTTCAATCA-ACTGTGCCTCCTTAC  1170


seq1: chr2_48655486_48655668
seq2: B6Ng01-282N07.g_75_257 (reverse)

seq1  CACACACACACACACACACACACACACACTAATTTAAAAGTAATAGAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACTAATTTAAAAGTAATAGAAAT  50

seq1  CTTTGAAAAGGAGGGCAATAAATTAGGATGTGTCTATTTATAACTTTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAAAAGGAGGGCAATAAATTAGGATGTGTCTATTTATAACTTTATT  100

seq1  ACTCTTAGATGTTTTTGGCAGTCAAGATTGTCCCTCTTCTATAAAATTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTAGATGTTTTTGGCAGTCAAGATTGTCCCTCTTCTATAAAATTAT  150

seq1  AGTATTTTGCAAGTTTCTTTAAAAGTACTCAAA  183
      |||||||||||||||||||||||||||||||||
seq2  AGTATTTTGCAAGTTTCTTTAAAAGTACTCAAA  183


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