BAC Information

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BAC

Clone NameB6Ng01-283L24
Chromosome2 (Build37)
Map Location 86,235,126 - 86,393,229
singlet/doubletdoublet
Overlap geneOlfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079
Upstream geneOlfr991-ps1, Olfr992, Olfr993, Olfr994, Olfr995, 4833423E24Rik, Olfr996, Olfr997-ps1, Olfr998, Olfr999-ps1, Olfr1000, Olfr1001-ps1, Olfr1002, GA_x5J8B7W531T-1558688-1559570, Olfr1004-ps1, Olfr154, GA_x5J8B7W531T-1577060-1577325, Olfr1006, GA_x5J8B7W531T-1588603-1588734, Olfr1008, Olfr1009, Olfr1010, Olfr1012, Olfr1013, Olfr1014, Olfr1015, Olfr1016, GA_x5J8B7W3KVV-518538-519236, Olfr1018, Olfr1019, Olfr1020, Olfr1021-ps1, Olfr1022, Olfr1023, Olfr1024, Olfr1025-ps1, Olfr1026, Olfr1027-ps1, Olfr1028, Olfr1029, Olfr1030, Olfr1031, Olfr1032, LOC100042075, Olfr1033, Olfr1034, Olfr1533-ps1, Olfr1035-ps1, Olfr1036, Olfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047, Olfr1048, Olfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992, Olfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1
Downstream geneOlfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1, Olfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125, Olfr1126, Pramel7, Pramel6, LOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283L24.bB6Ng01-283L24.g
ACCGA082629GA082630
length1,0601,156
definitionB6Ng01-283L24.b B6Ng01-283L24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,235,126 - 86,235,756)(86,392,050 - 86,393,229)
sequence
gaattcttctgtcaaatggagattctccacagatacttaaaagttatact
catacaagaatttatcagggcctaggaaatagggaggttgtgatattgca
ttattcatgagaaggtctgctagagcagaacaccctggtgctagctttca
caaggctcaaaggattagcactaattgtgactagggtgtaaaatccttac
aagtcattaaactgaccctaggctttatctttactgtaaacacttacctg
gatcctgtaagtccttttgaactcattcctttgttttgtgtcaggcaact
tcaatgtactttgcctgctgtgacatcctactccctttattttctgtagt
atatatactttatgacaatacattcagattctacacaatctcctttgtac
atttgtctgtcattccctgactccttgcccatctgcacccagagacccat
cctacccagacaagggacccaagagggtctgtggcactagcacccaacca
atggactagagacccctgtggttgaattagctaaaaggctggaagaagct
gaggagtagggtggccccatgggaagcgcagcagtctcaactgacctgga
cccctgagacctctcagacactgagctacaaaccaggcaggatacaccag
ctgatataatgtccctgacacatatggagcagagtactgcatggtctagc
ctcagcaagagaacatgcacccaaccctccatagacttgaggccccaggg
agtgaggatgcctgtttgggttgggttgggagagtagagacattctcttc
gaggtggggacagggtgacgaagtgtgggatggggaccagtcaagagcag
actggggcaggggggaatatagtctgatatgttaaaaatgcagaattaaa
atatataatttcaaataccttaaaattatttggacaattttcaaagtgta
aaccttatatatacttagtacttaatttacagttttattctaatgatttc
attgtgtaatcatcactttttaagtctgtaataagattccagttactctt
ctcatagtta
gaattctggtgctaatccagtttccaaatatcatacttctattagaggag
aataatttccttcttggaacattattaactacacataactgctaagcctg
ttgcaaaatataaacatattttgtaactatagaactgagggtatatctta
tagaactgaaggtatatctgttgatgcatcttgtgcatgagagagagaaa
ttttagtatgtataaaatggattttgaatcttcaagcagaattttctact
aaaataaacacagtaacatttgtatatatcagcatgtacttctgttttat
gaaattatactgcttttgatttaattttggtttatatattcaacagtttc
atacattagtaaaataaaacttaattattgtcacttcaattcttgactcc
ctcatcatccttctccatctgaaacatttattttcaaatatctccttcta
ctttcttctgtgatttgtagcccactgaattaataaaagttacaatgtta
ggtagcaagatgtttaaaataatatggcaaactaagtgtaagtttagcat
taaagaaaataacatttcattgttttccttcaggaaaggatggcattgta
gaggctctctcaaaacatgatttaaatgttggtgagcccaactagtccag
tctaatacagacatctacaaatgcagtgagttcatgaattcattatctat
attataagcagaagaaatgattttactttatatcttagttaccttagtcc
ttaaatttttcatccccccttctcttatgtcctctaagccttacaaacat
agagagagagatcactttttcattaattaagcattctactactacatatt
ctcatgcctttgcctagtgtgtgtttctacagtaagtgtatctatctaca
gtaagaatatgttgataaggtataatgtttatcagacttgtttttttttt
ttttcaactaccgtatcatgacttgcattctaaggctgaattaatgggaa
aatactaaggaaaaaaactaactagatttcatacaagaatgtttactttc
gtagctgaattcagcttcattagctcaatcattcatgccacatttattgc
atatatttataaagtatcaattatttgaagaaatggaccaaaatcgttct
tctgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_86235126_86235756
seq2: B6Ng01-283L24.b_482_1105

seq1  ACCCAGAGACCCATCCTACCCAGACAAGGGACCCAAGAGGGTCTGTGGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGAGACCCATCCTACCCAGACAAGGGACCCAAGAGGGTCTGTGGCA  50

seq1  CTAGCACCCAACCAATGGACTAGAGACCCCTGTGGTTGAATTAGCTAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCACCCAACCAATGGACTAGAGACCCCTGTGGTTGAATTAGCTAAAA  100

seq1  GGCTGGAAGAAGCTGAGGAGTAGGGTGGCCCCATGGGAAGCGCAGCAGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGAAGAAGCTGAGGAGTAGGGTGGCCCCATGGGAAGCGCAGCAGTC  150

seq1  TCAACTGACCTGGACCCCTGAGACCTCTCAGACACTGAGCTACAAACCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTGACCTGGACCCCTGAGACCTCTCAGACACTGAGCTACAAACCAG  200

seq1  GCAGGATACACCAGCTGATATAATGTCCCTGACACATATGGAGCAGAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGATACACCAGCTGATATAATGTCCCTGACACATATGGAGCAGAGTA  250

seq1  CTGCATGGTCTAGCCTCAGCAAGAGAACATGCACCCAACCCTCCATAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATGGTCTAGCCTCAGCAAGAGAACATGCACCCAACCCTCCATAGAC  300

seq1  TTGAGGCCCCAGGGAGTGAGGATGCCTGTTTGGGTTGGGTTGGGAGAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGCCCCAGGGAGTGAGGATGCCTGTTTGGGTTGGGTTGGGAGAGTA  350

seq1  GAGACATTCTCTTCGAGGTGGGGACAGGGTGACGAAGTGTGGGATGGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACATTCTCTTCGAGGTGGGGACAGGGTGACGAAGTGTGGGATGGGGA  400

seq1  CCAGTCAAGAGCAGACTGGGGCAGGGGGGAATATAGTCTGATATGTTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CCAGTCAAGAGCAGACTGGGGCAGGGGGGAATATAGTCTGATATGTT-AA  449

seq1  AAATGCAGAATAAAAATATATAAATTCAAATAACTTAAAAAATTAATTGG  500
      ||||||||||| ||||||||||| |||||||| |||  ||||||| ||||
seq2  AAATGCAGAATTAAAATATATAATTTCAAATACCTT--AAAATTATTTGG  497

seq1  ACAATTTTCAAAGTGTAAACCTTATATATACTTAGTACTTAATATACAAG  550
      ||||||||||||||||||||||||||||||||||||||||||| ||| ||
seq2  ACAATTTTCAAAGTGTAAACCTTATATATACTTAGTACTTAATTTAC-AG  546

seq1  TTTTATTCTAATGAATTCAATTGTGTAATCATCAACTTTTTAAATCTTTA  600
      |||||||||||||| ||| |||||||||||||| ||||||||| ||| ||
seq2  TTTTATTCTAATGATTTC-ATTGTGTAATCATC-ACTTTTTAAGTCTGTA  594

seq1  AT-AGATTCCCATGTTACTCTTCTCATAGTTA  631
      || |||||||   |||||||||||||||||||
seq2  ATAAGATTCC--AGTTACTCTTCTCATAGTTA  624

seq1: chr2_86392050_86393229
seq2: B6Ng01-283L24.g_66_1221 (reverse)

seq1  TTCAGAAGAACCTATTTTGTTTCATTTTTTCTTTTAAATAATATTGAAAT  50
      |||||||||| | |||||| | ||||| |||    |||||  |||||   
seq2  TTCAGAAGAA-CGATTTTGGTCCATTTCTTC----AAATA--ATTGA---  40

seq1  TAATTTTATAATATATGCAAATTAAAAGTGGCATGAAATGA-TGAGCTAA  99
      || |||   |||||||||||  |||| |||||||| ||||| ||||||||
seq2  TACTTTATAAATATATGCAA--TAAATGTGGCATG-AATGATTGAGCTAA  87

seq1  TGAAAAGCTGAAAATTTCAGGCTACGAAAGTAAACATTTCTTGTATGAAA  149
      ||  ||||||||   |||| |||||||||||||||| |||||||||||||
seq2  TG--AAGCTGAA---TTCA-GCTACGAAAGTAAACA-TTCTTGTATGAAA  130

seq1  TTCTAGTTAGTTTTTTTCCTTTAGTTATTTTCCATTTAATTCAGCCTTAG  199
       |||||||||||||||||| |||| ||||||||  |||||||||||||||
seq2  -TCTAGTTAGTTTTTTTCC-TTAG-TATTTTCCCATTAATTCAGCCTTAG  177

seq1  AATGCCAAGTCATGATACGGTAGTTG-AAAAAAAAAAAAACAAGTCTGAT  248
      |||| ||||||||||||||||||||| |||||||||||||||||||||||
seq2  AATG-CAAGTCATGATACGGTAGTTGAAAAAAAAAAAAAACAAGTCTGAT  226

seq1  AAACATTATACCCTTATCAACATATTTCTTACTGTAGATAGATACACTTA  298
      |||||||||| ||||||||||||| |||||||||||||||||||||||||
seq2  AAACATTATA-CCTTATCAACATA-TTCTTACTGTAGATAGATACACTTA  274

seq1  CTGTAGAAACACACACTAGGCAAAGGCATGAGAATATGTAGTAGTAGAAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGAAACACACACTAGGCAAAGGCATGAGAATATGTAGTAGTAGAAT  324

seq1  GCTTAATTAATGAAAAAGTGATCTCTCTCTCTATGTTTGTAAGGCTTAGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAATTAATGAAAAAGTGATCTCTCTCTCTATGTTTGTAAGGCTTAGA  374

seq1  GGACATAAGAGAAGGGGGGATGAAAAATTTAAGGACTAAGGTAACTAAGA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATAAGAGAAGGGGGGATGAAAAATTTAAGGACTAAGGTAACTAAGA  424

seq1  TATAAAGTAAAATCATTTCTTCTGCTTATAATATAGATAATGAATTCATG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAGTAAAATCATTTCTTCTGCTTATAATATAGATAATGAATTCATG  474

seq1  AACTCACTGCATTTGTAGATGTCTGTATTAGACTGGACTAGTTGGGCTCA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCACTGCATTTGTAGATGTCTGTATTAGACTGGACTAGTTGGGCTCA  524

seq1  CCAACATTTAAATCATGTTTTGAGAGAGCCTCTACAATGCCATCCTTTCC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACATTTAAATCATGTTTTGAGAGAGCCTCTACAATGCCATCCTTTCC  574

seq1  TGAAGGAAAACAATGAAATGTTATTTTCTTTAATGCTAAACTTACACTTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGAAAACAATGAAATGTTATTTTCTTTAATGCTAAACTTACACTTA  624

seq1  GTTTGCCATATTATTTTAAACATCTTGCTACCTAACATTGTAACTTTTAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCCATATTATTTTAAACATCTTGCTACCTAACATTGTAACTTTTAT  674

seq1  TAATTCAGTGGGCTACAAATCACAGAAGAAAGTAGAAGGAGATATTTGAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCAGTGGGCTACAAATCACAGAAGAAAGTAGAAGGAGATATTTGAA  724

seq1  AATAAATGTTTCAGATGGAGAAGGATGATGAGGGAGTCAAGAATTGAAGT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATGTTTCAGATGGAGAAGGATGATGAGGGAGTCAAGAATTGAAGT  774

seq1  GACAATAATTAAGTTTTATTTTACTAATGTATGAAACTGTTGAATATATA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATAATTAAGTTTTATTTTACTAATGTATGAAACTGTTGAATATATA  824

seq1  AACCAAAATTAAATCAAAAGCAGTATAATTTCATAAAACAGAAGTACATG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAAATTAAATCAAAAGCAGTATAATTTCATAAAACAGAAGTACATG  874

seq1  CTGATATATACAAATGTTACTGTGTTTATTTTAGTAGAAAATTCTGCTTG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATATATACAAATGTTACTGTGTTTATTTTAGTAGAAAATTCTGCTTG  924

seq1  AAGATTCAAAATCCATTTTATACATACTAAAATTTCTCTCTCTCATGCAC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTCAAAATCCATTTTATACATACTAAAATTTCTCTCTCTCATGCAC  974

seq1  AAGATGCATCAACAGATATACCTTCAGTTCTATAAGATATACCCTCAGTT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGCATCAACAGATATACCTTCAGTTCTATAAGATATACCCTCAGTT  1024

seq1  CTATAGTTACAAAATATGTTTATATTTTGCAACAGGCTTAGCAGTTATGT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGTTACAAAATATGTTTATATTTTGCAACAGGCTTAGCAGTTATGT  1074

seq1  GTAGTTAATAATGTTCCAAGAAGGAAATTATTCTCCTCTAATAGAAGTAT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTAATAATGTTCCAAGAAGGAAATTATTCTCCTCTAATAGAAGTAT  1124

seq1  GATATTTGGAAACTGGATTAGCACCAGAATTC  1180
      ||||||||||||||||||||||||||||||||
seq2  GATATTTGGAAACTGGATTAGCACCAGAATTC  1156