BAC Information

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BAC

Clone NameB6Ng01-284F04
Chromosome2 (Build37)
Map Location 133,552,237 - 133,553,388
singlet/doubletsinglet
Overlap genenone
Upstream geneChgb, 3300001M20Rik, Mcm8, Crls1, B430119L13Rik, 5830467P10Rik, LOC668908, LOC100043785, A430048G15Rik, Bmp2
Downstream geneHao1, Txndc13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284F04.bB6Ng01-284F04.g
ACCGA083054GA083055
length9771,135
definitionB6Ng01-284F04.b B6Ng01-284F04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccattttttaatggggttgtttgatt
ttctggagtctaccttcatgagttctttatatatatatattggatattag
tcccctatctgatttaggataggtaaagatcctttcccaatctgttggtg
gcctttttgtcttattgactgtgtcttttgccttgcagaagctttgcaat
tttatgaggtcccatttgtcgaatctcgatcttacagcacaagtcattgc
tgttctatttaggaatttttcccctggatcaatatcttcgaggcttttcc
ctactttctcctctataagtttgagtgtctctggttttatgtggagttcc
ttaatccacttagagttgaccttagtacaaggagataggagtggatcaat
tcgcattgttctgtatgataaccgccagttgtgccagcaccatttgttga
aaatactgtcttttttccactggatggtttttgctcccttgtcaaagatc
aagtgaccataggtgtgtgcgttcgtttcttggtcttcaattctattcca
ttggtctacttgtctgttgctataccagtaccatgcagtttttatcacaa
ttgctctgtagtacagctttaggtcaggcatggtgattccaccagaggtt
cttttatccttgagaagactttttgctatcctaggttttttgttattcca
gatgaatttgcagattgctctttctaattcgttgaagaattgagttggaa
ttttgatggggattgcattgaatctgtagattgcttttggcaagatagcc
atttttactatattgatcctgccaatccatgatcatgggagatctttcca
tcttctgagatcttctttaatttctttcttcagagacttaaagttcttat
catacagatctttcacttccttagttagagtcatgccaaaggtattttat
attatttgtgactattgagaagggtgt

gaattctcatccacttttaatcataaaaaaaaaaaaatgatggttttgaa
atgtgcacatggattctgttctctgaggacccagtcccagatttttgaaa
ccaggtgcactgttcagcaggtgttaactgccagaagaatttagaagcaa
tgtcaccgagaggggaagaggatgttatgaaggatctgtccggtttggtg
catccctctgccttgtataaccagcctgggaggtcattaagtttcccctg
tccagagatgatgcagagaaggagtggttacctttttaagtggttagaaa
tagatcgcttagagtgggcatctttgaaactgtgcaacagatagttgctc
tgtcttactgtttaacaacagtaaaactcttcagaaacaccggccaataa
gtccagtgactgctagtggactggatgaccatttccagcagagttagtat
atgttagagtataggtaacatttgtctcttctttctagaaggagatttac
tttcccttacttgatcgtaacaaatccagtccagctggttatactttggc
aagtaacaaacttggctgttgccactgcttttttttttctacctaagacc
aatcattttcttttcctgcacggtagagaaaggacccttttccttcctag
ggaaaacttcaatatgccattcttttggtcccatgttttgctgttatatt
ggtgaagaatatagatctcttttctttcccgtagagtagccacccatctt
aggaaaacctatgaaagcccccccccccctcccagtgcagacagatcaaa
gctcctttagacaagcggtgcttctcttgacataaaagcccaacagttat
cgaggtctctgaccaggatgcacttttctctggtcatgtggcctcagccc
tacaggttcatgctgtgtccacagctattacaacaacaaaacaaccaccc
acaaaaaatccctcagcatgtggcctaatttctatagagccagtattgac
ttttgtgtggtgtgctttttaaacctttatctgttagactcgtgatatgt
cgcatcctgaacgagtgacatgatagaaatgacttctggtatatctacag
tgcagtcaagcacccgagttaccatggatcatctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_133552237_133553388
seq2: B6Ng01-284F04.g_64_1198

seq1  GAATTCTCATCCACTTTTAATCATAAAAAAAAAAAAATGATGGTTTTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATCCACTTTTAATCATAAAAAAAAAAAAATGATGGTTTTGAA  50

seq1  ATGTGCACATGGATTCTGTTCTCTGAGGACCCAGTCCCAGATTTTTGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCACATGGATTCTGTTCTCTGAGGACCCAGTCCCAGATTTTTGAAA  100

seq1  CCAGGTGCACTGTTCAGCAGGTGTTAACTGCCAGAAGAATTTAGAAGCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTGCACTGTTCAGCAGGTGTTAACTGCCAGAAGAATTTAGAAGCAA  150

seq1  TGTCACCGAGAGGGGAAGAGGATGTTATGAAGGATCTGTCCGGTTTGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACCGAGAGGGGAAGAGGATGTTATGAAGGATCTGTCCGGTTTGGTG  200

seq1  CATCCCTCTGCCTTGTATAACCAGCCTGGGAGGTCATTAAGTTTCCCCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCTCTGCCTTGTATAACCAGCCTGGGAGGTCATTAAGTTTCCCCTG  250

seq1  TCCAGAGATGATGCAGAGAAGGAGTGGTTACCTTTTTAAGTGGTTAGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAGATGATGCAGAGAAGGAGTGGTTACCTTTTTAAGTGGTTAGAAA  300

seq1  TAGATCGCTTAGAGTGGGCATCTTTGAAACTGTGCAACAGATAGTTGCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCGCTTAGAGTGGGCATCTTTGAAACTGTGCAACAGATAGTTGCTC  350

seq1  TGTCTTACTGTTTAACAACAGTAAAACTCTTCAGAAACACCGGCCAATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTACTGTTTAACAACAGTAAAACTCTTCAGAAACACCGGCCAATAA  400

seq1  GTCCAGTGACTGCTAGTGGACTGGATGACCATTTCCAGCAGAGTTAGTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGTGACTGCTAGTGGACTGGATGACCATTTCCAGCAGAGTTAGTAT  450

seq1  ATGTTAGAGTATAGGTAACATTTGTCTCTTCTTTCTAGAAGGAGATTTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTAGAGTATAGGTAACATTTGTCTCTTCTTTCTAGAAGGAGATTTAC  500

seq1  TTTCCCTTACTTGATCGTAACAAATCCAGTCCAGCTGGTTATACTTTGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTTACTTGATCGTAACAAATCCAGTCCAGCTGGTTATACTTTGGC  550

seq1  AAGTAACAAACTTGGCTGTTGCCACTGCTTTTTTTTTTCTACCTAAGACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAACAAACTTGGCTGTTGCCACTGCTTTTTTTTTTCTACCTAAGACC  600

seq1  AATCATTTTCTTTTCCTGCACGGTAGAGAAAGGACCCTTTTCCTTCCTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATTTTCTTTTCCTGCACGGTAGAGAAAGGACCCTTTTCCTTCCTAG  650

seq1  GGAAAACTTCAATATGCCATTCTTTTGGTCCCATGTTTTGCTGTTATATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAACTTCAATATGCCATTCTTTTGGTCCCATGTTTTGCTGTTATATT  700

seq1  GGTGAAGAATATAGATCTCTTTTCTTTCCCGTAGAGTAGCCACCCATCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAAGAATATAGATCTCTTTTCTTTCCCGTAGAGTAGCCACCCATCTT  750

seq1  AGGAAAACCTATGAAAGCCCCCCCCCCCCTCCCAGTGCAGACAGATCAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAACCTATGAAAGCCCCCCCCCCCCTCCCAGTGCAGACAGATCAAA  800

seq1  GCTCCTTTAGACAAGCGGTGCTTCTCTTGACATAAAAGCCCAACAGTTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTTTAGACAAGCGGTGCTTCTCTTGACATAAAAGCCCAACAGTTAT  850

seq1  CGAGGTCTCTGACCAGGATGCACTTTTCTCTGGTCATGTGGCCTCAG-CC  899
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CGAGGTCTCTGACCAGGATGCACTTTTCTCTGGTCATGTGGCCTCAGCCC  900

seq1  TACAGGTTCATGCTGTGTCCACAGCTATTACAAACAAACAAAACAACCAC  949
      |||||||||||||||||||||||||||||||||   ||||||||||||||
seq2  TACAGGTTCATGCTGTGTCCACAGCTATTACAA--CAACAAAACAACCAC  948

seq1  CCAACAAAAATCCCTCAGGCATGTGGCCTAATTTCTATAAGAGGCAGTAT  999
      |||  |||||||||||| |||||||||||||||||||| |||| ||||||
seq2  CCACAAAAAATCCCTCA-GCATGTGGCCTAATTTCTAT-AGAGCCAGTAT  996

seq1  TGACCTTTTGTGT-GTGTGCTTTTTTAAACCTTTATCTGTAGGACTCGTG  1048
      ||| ||||||||| |||||| |||||||||||||||||||  ||||||| 
seq2  TGA-CTTTTGTGTGGTGTGC-TTTTTAAACCTTTATCTGTTAGACTCGT-  1043

seq1  GATAATGTCGGCATCTTTAAACAAAGTGACATGATAGAAATGACATCTTT  1098
      ||| ||||| ||||| | ||    |||||||||||||||||||| ||  |
seq2  GAT-ATGTC-GCATCCTGAA--CGAGTGACATGATAGAAATGACTTC--T  1087

seq1  GTTATTATCTACAAGTGCAGGGTTCAAGCACCCCGAGTCACCATGGATCA  1148
      | || ||||||| |||||||   ||||||| ||||||| |||||||||||
seq2  GGTA-TATCTAC-AGTGCAG---TCAAGCA-CCCGAGTTACCATGGATCA  1131

seq1  TCTT  1152
      ||||
seq2  TCTT  1135


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