BAC Information

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BAC

Clone NameB6Ng01-284F12
Chromosome2 (Build37)
Map Location 64,213,550 - 64,373,233
singlet/doubletdoublet
Overlap genenone
Upstream geneEG667257, Fign
Downstream geneLOC620544, LOC667291, Grb14, Cobll1, LOC383705, 9330158F14Rik, Scn3a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284F12.bB6Ng01-284F12.g
ACCGA083070GA083071
length1,1721,170
definitionB6Ng01-284F12.b B6Ng01-284F12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,372,061 - 64,373,233)(64,213,550 - 64,214,707)
sequence
gaattctcaggccagtgtctgcctctgctagtgtggatacataaacaagc
catcagtggttccagaaacatcatcgtcttcacactttgttagcagctgc
ttccttcagtgagtattaatatgctggaacgagccatgagacgggccggc
tttggatacgcagccttgaacatgagctacatataagaggaaattggtat
tttcatttgctgcgcatgctttaatgatattaagcaatctaatatggtgc
gtacggcggatttcggtaatgtttctcttgagaatttccgacggtaatgg
caatttaaaatgacagccttacatttatatagctcctttcatctccgagc
cttgccactttataaagttagatgaagcaatcactcgacttacccaccac
agaaattctaccacctccagggcaaacctgagcttactttcaaaattgac
tcaacattacatataattatgacaagaggcaaaagcaacacagtgaatga
agaactaataagggacacagaaagataacataatttccaaacgaattttt
ttattaaaggataagaatcagtaaacaaatatttccctggggttatttaa
taagcactggcgcataggactgtgaacacccatgccaaccactagagagc
attttagggttacagatttaaggctgactctctgaaggttgaatttagac
tgttgaaagtaaaaattcagaaatcatagaaacttcacaaaactaggaca
agaaaagaaatactcataggatgatgattcttaaaaagatcatattcttc
tccaggctgaaaccaagatacccctgcctctacctatgtctacttagcaa
gatgacgtacacatatacactcagagagaagtagcagaaacccaaagctt
gtgaaatcctttcaacacatatcaatcacaggcattcttaagtggttctg
cgtgcaactgaattcacttttttctgatccattattttagggaattacat
agggaggtgaataaattcatagtttagggcatgagtaccaggatacacat
ttttcatgctctatatatctgagcatgtcttgtgagcagaaaaactaggc
tcacttatacctgctggccaaaaagttatctacagagcctgccatatcta
ggacctaaaaccgatccgattg

gaattcacatttcagcacatagacaatgaacaataatgaactatgccttt
aaaatcatgtttaagagaacctgaaaggagggaaacaagtagaaaaaagt
caagcatttttcttctgctctttgagttgccttaacttacaacaaaaagt
catctactgactacaggaagagaaaataaatattgatctcctaaaatctt
tataacagggtgtaatcttctatctagaaattctcgatttagacatatat
acttttatgcagaagtaattcatgaaagcaatgctgactgcagctgaaaa
aaatcatttatttaaatatatgaagggaaaaagaaagcacctgcaatctc
cttaaagtccggtttgttttatttgtctagcgattgaaaagttagtagac
tatttagagaaatgtatgtcctgtgcagtatttcatgaatataagtgaga
acttagtagattttggtgtctggataaatcgtatttcccaggaagtatga
ctacagcacattagtgtcttggttactaagtggttgattgcttcaagcag
agaattctgagttttagctcaacatttatacactgactcatgcaagcaca
ttattggtgtttctctagctttatctgcctgccacagggtgggtattcta
aagagtttggtctctttctgaatctagtctgtttactggctcagggtttc
atgagttgctttagcaacttcacagtgcacagcatgctgtatggtgagca
cataaacaccaattgctgctcaagagagcttttgggaatttggctgctgg
gaaaccctgtaacgaatacttgaggtttccagtttgattcttgttctctt
ctcatgtcacacctttgcttcatagccctgaaaagtgttcaatcagtccc
ttataacatcattgtgagaaagtaacaattcccatcccacacaagacaaa
atggcgattcttccaaatgtccacatggaaatttcgaagttctagcagac
agagtagtttgtattagtatcaaatacttgttttctgacaaaagtcttga
gacatgtcaatttttcaccttccttaaaaatgtaggcatcaactcttcat
ttagccttaatgaattttaatcagctgtattaacatgttccaccatcccc
atgctctcaccaattcctgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_64372061_64373233
seq2: B6Ng01-284F12.b_47_1218 (reverse)

seq1  CAATTGGATC-GTTTTA-GTTCTAGATATGGCAGCTTCTTGTTTGAATAC  48
      |||| ||||| |||||| || |||||||||||||  |||   | ||  ||
seq2  CAATCGGATCGGTTTTAGGTCCTAGATATGGCAGGCTCT--GTAGATAAC  48

seq1  -TTTTGGCAGGCAGGTATAGTTGGAGCCTAG-TTTTCTGCTCCACAGGAC  96
       |||||||  |||||||||  | |||||||| ||||||||| |||| |||
seq2  TTTTTGGCCAGCAGGTATAAGT-GAGCCTAGTTTTTCTGCT-CACAAGAC  96

seq1  ATGGCCTCAGATATATTAGAGCATGAAAAATGTGTATCCTGGTACTCATG  146
      |||  |||||||||| ||||||||||||||||||||||||||||||||||
seq2  ATG--CTCAGATATA-TAGAGCATGAAAAATGTGTATCCTGGTACTCATG  143

seq1  CC--TAACTATGAATTTATTCACCTCCCTATGTAATT-CCTAAAATAATG  193
      ||   |||||||||||||||||||||||||||||||| ||||||||||||
seq2  CCCTAAACTATGAATTTATTCACCTCCCTATGTAATTCCCTAAAATAATG  193

seq1  GATCAAGAAAAAGTGAATTCAGTTGCACGCAGAACCACTTAAGAATGCCT  243
      |||||  |||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGAAAAAAGTGAATTCAGTTGCACGCAGAACCACTTAAGAATGCCT  243

seq1  GTGATTGATATGTGTTGAAAGGATTTTCACAAGCTTTGGGTTTCTGCTAC  293
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GTGATTGATATGTGTTGAAAGGA-TTTCACAAGCTTTGGGTTTCTGCTAC  292

seq1  TTCTCTCTGAGTGTATATGTGTACGTCATCTTGCTAAGTAGACATAGGTA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCTGAGTGTATATGTGTACGTCATCTTGCTAAGTAGACATAGGTA  342

seq1  GAGGCAGGGGTATCTTGGTTTCAGCCTGGAGAAGAATATGATCTTTTTAA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGGGGTATCTTGGTTTCAGCCTGGAGAAGAATATGATCTTTTTAA  392

seq1  GAATCATCATCCTATGAGTATTTCTTTTCTTGTCCTAGTTTTGTGAAGTT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCATCATCCTATGAGTATTTCTTTTCTTGTCCTAGTTTTGTGAAGTT  442

seq1  TCTATGATTTCTGAATTTTTACTTTCAACAGTCTAAATTCAACCTTCAGA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGATTTCTGAATTTTTACTTTCAACAGTCTAAATTCAACCTTCAGA  492

seq1  GAGTCAGCCTTAAATCTGTAACCCTAAAATGCTCTCTAGTGGTTGGCATG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAGCCTTAAATCTGTAACCCTAAAATGCTCTCTAGTGGTTGGCATG  542

seq1  GGTGTTCACAGTCCTATGCGCCAGTGCTTATTAAATAACCCCAGGGAAAT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTCACAGTCCTATGCGCCAGTGCTTATTAAATAACCCCAGGGAAAT  592

seq1  ATTTGTTTACTGATTCTTATCCTTTAATAAAAAAATTCGTTTGGAAATTA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTTTACTGATTCTTATCCTTTAATAAAAAAATTCGTTTGGAAATTA  642

seq1  TGTTATCTTTCTGTGTCCCTTATTAGTTCTTCATTCACTGTGTTGCTTTT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATCTTTCTGTGTCCCTTATTAGTTCTTCATTCACTGTGTTGCTTTT  692

seq1  GCCTCTTGTCATAATTATATGTAATGTTGAGTCAATTTTGAAAGTAAGCT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTTGTCATAATTATATGTAATGTTGAGTCAATTTTGAAAGTAAGCT  742

seq1  CAGGTTTGCCCTGGAGGTGGTAGAATTTCTGTGGTGGGTAAGTCGAGTGA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTTGCCCTGGAGGTGGTAGAATTTCTGTGGTGGGTAAGTCGAGTGA  792

seq1  TTGCTTCATCTAACTTTATAAAGTGGCAAGGCTCGGAGATGAAAGGAGCT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTCATCTAACTTTATAAAGTGGCAAGGCTCGGAGATGAAAGGAGCT  842

seq1  ATATAAATGTAAGGCTGTCATTTTAAATTGCCATTACCGTCGGAAATTCT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAATGTAAGGCTGTCATTTTAAATTGCCATTACCGTCGGAAATTCT  892

seq1  CAAGAGAAACATTACCGAAATCCGCCGTACGCACCATATTAGATTGCTTA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGAAACATTACCGAAATCCGCCGTACGCACCATATTAGATTGCTTA  942

seq1  ATATCATTAAAGCATGCGCAGCAAATGAAAATACCAATTTCCTCTTATAT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCATTAAAGCATGCGCAGCAAATGAAAATACCAATTTCCTCTTATAT  992

seq1  GTAGCTCATGTTCAAGGCTGCGTATCCAAAGCCGGCCCGTCTCATGGCTC  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTCATGTTCAAGGCTGCGTATCCAAAGCCGGCCCGTCTCATGGCTC  1042

seq1  GTTCCAGCATATTAATACTCACTGAAGGAAGCAGCTGCTAACAAAGTGTG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCAGCATATTAATACTCACTGAAGGAAGCAGCTGCTAACAAAGTGTG  1092

seq1  AAGACGATGATGTTTCTGGAACCACTGATGGCTTGTTTATGTATCCACAC  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACGATGATGTTTCTGGAACCACTGATGGCTTGTTTATGTATCCACAC  1142

seq1  TAGCAGAGGCAGACACTGGCCTGAGAATTC  1173
      ||||||||||||||||||||||||||||||
seq2  TAGCAGAGGCAGACACTGGCCTGAGAATTC  1172


seq1: chr2_64213550_64214707
seq2: B6Ng01-284F12.g_68_1237

seq1  GAATTCACATTTCAGCACATAGACAATGAACAATAATGAACTATGCCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATTTCAGCACATAGACAATGAACAATAATGAACTATGCCTTT  50

seq1  AAAATCATGTTTAAGAGAACCTGAAAGGAGGGAAACAAGTAGAAAAAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCATGTTTAAGAGAACCTGAAAGGAGGGAAACAAGTAGAAAAAAGT  100

seq1  CAAGCATTTTTCTTCTGCTCTTTGAGTTGCCTTAACTTACAACAAAAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCATTTTTCTTCTGCTCTTTGAGTTGCCTTAACTTACAACAAAAAGT  150

seq1  CATCTACTGACTACAGGAAGAGAAAATAAATATTGATCTCCTAAAATCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTACTGACTACAGGAAGAGAAAATAAATATTGATCTCCTAAAATCTT  200

seq1  TATAACAGGGTGTAATCTTCTATCTAGAAATTCTCGATTTAGACATATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACAGGGTGTAATCTTCTATCTAGAAATTCTCGATTTAGACATATAT  250

seq1  ACTTTTATGCAGAAGTAATTCATGAAAGCAATGCTGACTGCAGCTGAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTATGCAGAAGTAATTCATGAAAGCAATGCTGACTGCAGCTGAAAA  300

seq1  AAATCATTTATTTAAATATATGAAGGGAAAAAGAAAGCACCTGCAATCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATTTATTTAAATATATGAAGGGAAAAAGAAAGCACCTGCAATCTC  350

seq1  CTTAAAGTCCGGTTTGTTTTATTTGTCTAGCGATTGAAAAGTTAGTAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAGTCCGGTTTGTTTTATTTGTCTAGCGATTGAAAAGTTAGTAGAC  400

seq1  TATTTAGAGAAATGTATGTCCTGTGCAGTATTTCATGAATATAAGTGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAGAGAAATGTATGTCCTGTGCAGTATTTCATGAATATAAGTGAGA  450

seq1  ACTTAGTAGATTTTGGTGTCTGGATAAATCGTATTTCCCAGGAAGTATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGTAGATTTTGGTGTCTGGATAAATCGTATTTCCCAGGAAGTATGA  500

seq1  CTACAGCACATTAGTGTCTTGGTTACTAAGTGGTTGATTGCTTCAAGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGCACATTAGTGTCTTGGTTACTAAGTGGTTGATTGCTTCAAGCAG  550

seq1  AGAATTCTGAGTTTTAGCTCAACATTTATACACTGACTCATGCAAGCACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTCTGAGTTTTAGCTCAACATTTATACACTGACTCATGCAAGCACA  600

seq1  TTATTGGTGTTTCTCTAGCTTTATCTGCCTGCCACAGGGTGGGTATTCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGGTGTTTCTCTAGCTTTATCTGCCTGCCACAGGGTGGGTATTCTA  650

seq1  AAGAGTTTGGTCTCTTTCTGAATCTAGTCTGTTTACTGGCTCAGGGTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTTTGGTCTCTTTCTGAATCTAGTCTGTTTACTGGCTCAGGGTTTC  700

seq1  ATGAGTTGCTTTAGCAACTTCACAGTGCACAGCATGCTGTATGGTGAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTTGCTTTAGCAACTTCACAGTGCACAGCATGCTGTATGGTGAGCA  750

seq1  CATAAACACCAATTGCTGCTCAAGAGAGCTTTTGGGAATTTGGCTGCTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAACACCAATTGCTGCTCAAGAGAGCTTTTGGGAATTTGGCTGCTGG  800

seq1  GAAACCCTGTAACGAATACTTGAGGTTTCCAGTTTGATTCTTGTTCTCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCCTGTAACGAATACTTGAGGTTTCCAGTTTGATTCTTGTTCTCTT  850

seq1  CTCATGTCACACC-TTGC-TCATAGCCCTGAAAAGTGTTCAATCAGT-CC  897
      ||||||||||||| |||| |||||||||||||||||||||||||||| ||
seq2  CTCATGTCACACCTTTGCTTCATAGCCCTGAAAAGTGTTCAATCAGTCCC  900

seq1  TTATAACATCATTGTGAGAAAGTAACAATTCCCATCCCACACAAGACAAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAACATCATTGTGAGAAAGTAACAATTCCCATCCCACACAAGACAAA  950

seq1  ATGGCGATTCTTCCAAATGT-CACATGG-AATTTCGAAG-TCTAGCAGAC  994
      |||||||||||||||||||| ||||||| |||||||||| ||||||||||
seq2  ATGGCGATTCTTCCAAATGTCCACATGGAAATTTCGAAGTTCTAGCAGAC  1000

seq1  AGAGTAG-TTGTATTAGTATCAAATACT--GTTTCTGACAAAAG--CTGA  1039
      ||||||| ||||||||||||||||||||   |||||||||||||   |||
seq2  AGAGTAGTTTGTATTAGTATCAAATACTTGTTTTCTGACAAAAGTCTTGA  1050

seq1  GACATGTCAATTTTTCA-CTTCC-TAAAAATATAAGGCATCCACTCTTCA  1087
      ||||||||||||||||| ||||| ||||||| | ||||||| ||||||||
seq2  GACATGTCAATTTTTCACCTTCCTTAAAAATGT-AGGCATCAACTCTTCA  1099

seq1  TTTAG-CTTATTGAATTTT-ATCAGCTGTATTAACATGTTCAAACAACCC  1135
      ||||| |||| |||||||| |||||||||||||||||||||  || | ||
seq2  TTTAGCCTTAATGAATTTTAATCAGCTGTATTAACATGTTC-CACCATCC  1148

seq1  CCATGCTCTTAAACCAA-TCCTGT  1158
      |||||||||   ||||| ||||||
seq2  CCATGCTCT--CACCAATTCCTGT  1170


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