BAC Information

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BAC

Clone NameB6Ng01-285H11
Chromosome2 (Build37)
Map Location 61,257,247 - 61,258,329
singlet/doubletsinglet
Overlap genenone
Upstream genePla2r1, Itgb6, Rbms1, ENSMUSG00000075325
Downstream geneTank, Psmd14, Tbr1, LOC100039274, Slc4a10, Dpp4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-285H11.bB6Ng01-285H11.g
ACCGA083910GA083911
length1,0771,142
definitionB6Ng01-285H11.b B6Ng01-285H11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgaaattttttaaaacatttaaaaaaagaagtacaatattaagg
ccaggctgaatggtgcacctgtgtcacacagaaatcttttgaaaagtttt
ttcatgacaccttattcctaagactatcagtggtcatgaagatagcatgt
tttcctgtatcccaggcatcagtggtcatgaagacagcatgttttcctgt
atcccaggcatcagtggtcatgaagatagcatgttttcctgtatcccagg
catcagtggtcatgaagatagcatgttttcctgtatcccaggcatcagtg
gtcatgaagatagcatgttttcctgtatcccaggcatcagtggtcatgaa
gatagcatgttttcctgtatcccaggcatcagtggtcatgaagatagaat
gttttcctgtatcccaggcatcagtggtcatgaagatagcaggttttcct
gtatcccaggcatcagtggtcatgaagatagcatgttttcctgtatccca
ggcatcagtggtcatgaagatagcaggttttcctgtatcccaggcatcag
tggtcatgaagacagcaggttttcctgtatcccaggcaaggctgataatg
acagaggagagacatggatattattctggaagaatcttgcctatgcattt
tctgccttcgattgcttgctgcagataaaacagtttgcctcttttgctca
acccatggcatttccaaggcctggaaatcttcctgggtcagcatttgcca
cacagtatttaaagacaaagcaggaaccatcagactagcagaagtcaaga
taagcagtagaccagcagacaaagctggggaaaagatgtatcaggagaaa
aaaaacacaacacaaaaaaaacaaaaaaaacaaaaaaaacaaaacacttg
cccactaaagtggtcttaaattcaaaataatgctcaccaaccctcaacag
ccttttctataggcatggaaagccagctctagaattcacatgaagtttcc
aatagcaggatattttgacatagaaaaatggtgactcacagttccatgtt
gtatttgaaaaccacaagtttgggtat

gaattctttgttcagctctgagccccattttttaatggggttatttgatt
ttctggagactaccttcttgagttctttatatatattggatattagtccc
ctatccaatttgggataggtaaagatcctggatgcattttcaaaatggct
tgtacagcaaatagttttcgaggatagagttagagtcccaagagtctaaa
tcaagcatgcttgctgttcagtagaagagactagagttcagcacggcatt
cttgaagggtagcccactgcaggcacacaaatgtatttatacagcttccg
tgggacacaaaggcaggaaagaactgtccaaacaaacaaacaaacaaaca
cacacatgtatccatataaaccacggtactcactaaccttcctcaccatt
agctataaaatttgttgtctttgacccaagatctcatcagccagcaagat
ccattaaatcatggcaggctaacttattaatcagtaaagttaaattctag
agccagttatttgtattaaagagtggagatcagggcctagagagatggtt
cagtggttaagaacactgctcttccaaaaggacccaggttcattcctagc
accccctgtggctgctctcaactgtctataactctggttccagaggatct
gacacccgcacaccacagcacataaaaataaaataaaaaataattaaaaa
agaaagtttgattgaaacctgtgcaatagaagtgtactcatataatatcc
agtaaaatctaggtcttctactccaaattcatgccatgtggccttcaaag
ttcaacaataaaagaaacaagagaagccaaatattcccagaatatttggt
aaaattaattaaattaattaattgcagagagtgagcagaacaaaagggta
gtacccataggcttgttctttatgctatgtcttcttgggttctttccact
aacctccttcctgtgtcaggctctcaaggtaaaagcacagtgaaatgctg
ctaagcgcacttcacattcagactatgtaatgacatgaaaccctgcagtt
atgtgcagatcctgccatactagaattcgaaaagaaaatatgactgtctg
gaacctctccacttgctgttcaaaggtgttttaattgttcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_61257247_61258329
seq2: B6Ng01-285H11.b_45_1121

seq1  GAATTCTGAAATTTTTTAAAACATTTAAAAAAAGAAGTACAATATTAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAAATTTTTTAAAACATTTAAAAAAAGAAGTACAATATTAAGG  50

seq1  CCAGGCTGAATGGTGCACCTGTGTCACACAGAAATCTTTTGAAAAGTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCTGAATGGTGCACCTGTGTCACACAGAAATCTTTTGAAAAGTTTT  100

seq1  TTCATGACACCTTATTCCTAAGACTATCAGTGGTCATGAAGATAGCATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGACACCTTATTCCTAAGACTATCAGTGGTCATGAAGATAGCATGT  150

seq1  TTTCCTGTATCCCAGGCATCAGTGGTCATGAAGACAGCATGTTTTCCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGTATCCCAGGCATCAGTGGTCATGAAGACAGCATGTTTTCCTGT  200

seq1  ATCCCAGGCATCAGTGGTCATGAAGATAGCATGTTTTCCTGTATCCCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAGGCATCAGTGGTCATGAAGATAGCATGTTTTCCTGTATCCCAGG  250

seq1  CATCAGTGGTCATGAAGATAGCATGTTTTCCTGTATCCCAGGCATCAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGTGGTCATGAAGATAGCATGTTTTCCTGTATCCCAGGCATCAGTG  300

seq1  GTCATGAAGATAGCATGTTTTCCTGTATCCCAGGCATCAGTGGTCATGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGAAGATAGCATGTTTTCCTGTATCCCAGGCATCAGTGGTCATGAA  350

seq1  GATAGCATGTTTTCCTGTATCCCAGGCATCAGTGGTCATGAAGATAGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGCATGTTTTCCTGTATCCCAGGCATCAGTGGTCATGAAGATAGAAT  400

seq1  GTTTTCCTGTATCCCAGGCATCAGTGGTCATGAAGATAGCAGGTTTTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCCTGTATCCCAGGCATCAGTGGTCATGAAGATAGCAGGTTTTCCT  450

seq1  GTATCCCAGGCATCAGTGGTCATGAAGATAGCATGTTTTCCTGTATCCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCCCAGGCATCAGTGGTCATGAAGATAGCATGTTTTCCTGTATCCCA  500

seq1  GGCATCAGTGGTCATGAAGATAGCAGGTTTTCCTGTATCCCAGGCATCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCAGTGGTCATGAAGATAGCAGGTTTTCCTGTATCCCAGGCATCAG  550

seq1  TGGTCATGAAGACAGCAGGTTTTCCTGTATCCCAGGCAAGGCTGATAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCATGAAGACAGCAGGTTTTCCTGTATCCCAGGCAAGGCTGATAATG  600

seq1  ACAGAGGAGAGACATGGATATTATTCTGGAAGAATCTTGCCTATGCATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGGAGAGACATGGATATTATTCTGGAAGAATCTTGCCTATGCATTT  650

seq1  TCTGCCTTCGATTGCTTGCTGCAGATAAAACAGTTTGCCTCTTTTGCTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTTCGATTGCTTGCTGCAGATAAAACAGTTTGCCTCTTTTGCTCA  700

seq1  ACCCATGGCATTTCCAAGGCCTGGAAATCTTCCTGGGTCAGCATTTGCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATGGCATTTCCAAGGCCTGGAAATCTTCCTGGGTCAGCATTTGCCA  750

seq1  CACAGTATTTAAAGACAAAGCAGGAACCATCAGACTAGCAGAAGTCAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTATTTAAAGACAAAGCAGGAACCATCAGACTAGCAGAAGTCAAGA  800

seq1  TAAGCAGTAGACCAGCAGACAAAGCTGGGGAAAAGATGTATCAGGAGAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCAGTAGACCAGCAGACAAAGCTGGGGAAAAGATGTATCAGGAGAAA  850

seq1  AAAAACAACAACAACAAAAAAAACAAAAAAAACAAAAAAAACAAAACACT  900
      |||||| ||||| |||||||||||||||||||||||||||||||||||||
seq2  AAAAAC-ACAAC-ACAAAAAAAACAAAAAAAACAAAAAAAACAAAACACT  898

seq1  TGCCCACTAAAGTGGTCTTAAAATTCAAAATAATGCTCACCAAACCCTCA  950
      ||||||||||||||||||| ||||||||||||||||||||| ||||||||
seq2  TGCCCACTAAAGTGGTCTT-AAATTCAAAATAATGCTCACC-AACCCTCA  946

seq1  ACAGCCTTTTCTATAGGCATGGAAAGCCAGCTCTAGAATTCACATGAAG-  999
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ACAGCCTTTTCTATAGGCATGGAAAGCCAGCTCTAGAATTCACATGAAGT  996

seq1  TTCCAATAGCCAGGATAATTTTGACATAGAAAAATGGTGACTCACAGTTC  1049
      ||||||||| |||||| |||||||||||||||||||||||||||||||| 
seq2  TTCCAATAG-CAGGAT-ATTTTGACATAGAAAAATGGTGACTCACAGTT-  1043

seq1  CCATGTTGTATTTGAAAACCACAAGTTTTGGTAT  1083
      |||||||||||||||||||||||||||| |||||
seq2  CCATGTTGTATTTGAAAACCACAAGTTTGGGTAT  1077


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