BAC Information

Click to search

BAC

Clone NameB6Ng01-285I10
Chromosome2 (Build37)
Map Location 127,953,006 - 128,100,416
singlet/doubletdoublet
Overlap geneBcl2l11, LOC100043424
Upstream geneNcaph, 1700041B20Rik, 1810024B03Rik, LOC100043408, Ascc3l1, Ciao1, Tmem127, ENSMUSG00000074822, Stard7, Dusp2, Astl, Adra2b, A530057A03Rik, Fahd2a, Kcnip3, Prom2, Zfp661, Mrps5, Mal, LOC668892, Mall, Nphp1, 1500011K16Rik, Bub1, Acoxl
Downstream geneLOC100043729, LOC383791, LOC100043730, Gm355, Anapc1, Mertk, Tmem87b, 1600015H20Rik, Zc3h8, LOC100043735, LOC100043736, Zc3h6, LOC668894, Ttl, LOC100043738, Rpo1-2, Chchd5, LOC545461, LOC100043431, Slc20a1, A730036I17Rik, LOC671466, Ckap2l
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-285I10.bB6Ng01-285I10.g
ACCGA083955GA083956
length1,1201,039
definitionB6Ng01-285I10.b B6Ng01-285I10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,099,291 - 128,100,416)(127,953,006 - 127,954,031)
sequence
gaattccagaatagccagggctacacagagaaaccctgtctcaaaaaaaa
acaaaaaaaaaaacaaaacaaaaaaaaaaaaaaaaccaaaaagccaaaaa
aacaaaaaagactcctagtgacctagtgacctagtgacacactgctatac
ccatagatcggtcctcactcagcctcagcagggacgcttcttactgtagt
acataggaattaccaaagagacccacaagcgggaaagatgcagagaggga
gagactttggagcactcaattcgaagtcagatgtcttcatcaaatccctc
tcctcaagacaaggatttatggagaagaaaaggtcaagagactctaagag
ctggaggtggtgactgagtccaaggggtcaggtcttcacatagacaatgg
aagtgagagagtctcagggttcacagggactgtggtggcgtgcacgagac
ttgaacaggttcaggtggacggggtctcggcactgggagagtgaagtgga
caaggcttttgttttgccagttttattttgctttaatcttgatcttgccc
cttgtttaatgatgtgccatatagtatgcttttgcaggtcggggcagtgg
acacgggtagcgaggggaaaccgttgaagctataccacattcaggtcggg
ttgtttcgccaggagcttccctaggttagagatattaaatggcattgttt
actaataatatttgtaccttaaaatcgctttatctcatctcatagtgggt
tgaggatcacttgcatttgtgtgagacagatgccatcaggccaggtacct
gtgccctggctgccctttcgctggtgccaggctctgagctaagcctgagc
aggattcagctagaagcctctgtgcgggtatttaaagagaacagaaactg
caggactgtggatagaaagccaagattcaaaccaagcaggccaggctttg
taccacaagcagcatggctgccactttcgacattgttaacacagtccaca
tatgaaagaccacctgtcactttcatactggatcttcgattaagtgggtg
tacagtactcactcctaggaaatagaacgtgcagcactagtgggacaatt
ctggtctgttagagaataca
gaattcccgcaaagcgcgcgccgtcccggcctggcccaggggtggggcgg
ggcgcaaagcgaagctgcccggccccctaagttccagccggagctgcggt
ggccggcacagtctgagcggcgctgggcggcgagtttgtcaacaatcgcc
ttgccttcggctgcctgacccgtaggcgccgcccccaccgcctctgccca
ttggttacgatggggagcgactgcgcgcgggccaatgggggagcactggc
agccggcgccaggggcgcagggctggcggtgcccgcgcggcggcgggagc
tgcgcgctaggggcggagcgggaggaggcggaggatgatcccggcggcgg
ccggtgcagcgcgggccagaggcgcggcgcgcgaaaccttcggctccccg
gcggagcgtggcggagggcggacgggcaggcgcggggccctggagcccag
gacccggctttgtttcccttgcctcctcggtggcgacgtgcaggggtcgt
tcgatcggcgcaacacgccgcgctcggaagggaaggggcggacgtgagtc
tcggcatggtggcccggggagggaaagagtcagccttgcgccgggtattg
ccaagaacgcgcagctaggtgtggaactttcaaagggatgtctcttaagg
ccctctttggaagtgtgcacattccggcaaggttgcacccgagagaagtg
gtttagtgtttggggtggcgcgcagggcagcagcaggagggaccttgcgg
ccgagggcgctcgacccgggcggagctgcgctcggagttacaaagtctat
ttgtgacgcacttactacgactgacggccgctgccaaaccttctccagac
ttgctgccctcagcattttcggcaaaccaatggggcccggagcagggaag
ggcggccagccgcctgcaatctctgcatctgcgccccgcttcctgtgctt
ccagctccgcatctgaagcccggggaaatgagaaagccgcttgggaattt
cagacttgaattcaagtttgtcctgaagggataagcacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_128099291_128100416
seq2: B6Ng01-285I10.b_49_1162 (reverse)

seq1  TGTA-TCTCTACACAGACCCAGAATGGTTCCCACTTAGTGGCTGCCACG-  48
      |||| |||||| ||||| ||||||| | |||||| |||| |||| |||| 
seq2  TGTATTCTCTA-ACAGA-CCAGAATTG-TCCCAC-TAGT-GCTG-CACGT  44

seq1  TCTATTTCCTTAGGGAGTTGAGTTACTGGTACACCCACTTTATCGGAAGG  98
      ||||||||||   |||| |||| |||| |||||||||||| ||||  | |
seq2  TCTATTTCCT--AGGAG-TGAG-TACT-GTACACCCACTTAATCG--AAG  87

seq1  ATCCAGTAATGAAAGTGACAGGTGGTCTTTCATATGTGGACTGTGTTACA  148
      ||||||| ||||||||||||||||||||||||||||||||||||||||  
seq2  ATCCAGT-ATGAAAGTGACAGGTGGTCTTTCATATGTGGACTGTGTTAAC  136

seq1  ATTGTCG-AAGTGGCAGCCATGCTGCTTGTGGTACAAAGCCTGGCCTGCT  197
      | ||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCGAAAGTGGCAGCCATGCTGCTTGTGGTACAAAGCCTGGCCTGCT  186

seq1  TGGTTTGAATCTTGGCTTTCTTATCCACAGTCCTGCAGTTTCTGTTCTCT  247
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TGGTTTGAATCTTGGCTTTC-TATCCACAGTCCTGCAGTTTCTGTTCTCT  235

seq1  TTAAATACCCGCACAGAGGCTTCTAGCTGAATCCTGCTCAGGCTTAGCTC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATACCCGCACAGAGGCTTCTAGCTGAATCCTGCTCAGGCTTAGCTC  285

seq1  AGAGCCTGGCACCAGCGAAAGGGCAGCCAGGGCACAGGTACCTGGCCTGA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCTGGCACCAGCGAAAGGGCAGCCAGGGCACAGGTACCTGGCCTGA  335

seq1  TGGCATCTGTCTCACACAAATGCAAGTGATCCTCAACCCACTATGAGATG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATCTGTCTCACACAAATGCAAGTGATCCTCAACCCACTATGAGATG  385

seq1  AGATAAAGCGATTTTAAGGTACAAATATTATTAGTAAACAATGCCATTTA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAAGCGATTTTAAGGTACAAATATTATTAGTAAACAATGCCATTTA  435

seq1  ATATCTCTAACCTAGGGAAGCTCCTGGCGAAACAACCCGACCTGAATGTG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTCTAACCTAGGGAAGCTCCTGGCGAAACAACCCGACCTGAATGTG  485

seq1  GTATAGCTTCAACGGTTTCCCCTCGCTACCCGTGTCCACTGCCCCGACCT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGCTTCAACGGTTTCCCCTCGCTACCCGTGTCCACTGCCCCGACCT  535

seq1  GCAAAAGCATACTATATGGCACATCATTAAACAAGGGGCAAGATCAAGAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAGCATACTATATGGCACATCATTAAACAAGGGGCAAGATCAAGAT  585

seq1  TAAAGCAAAATAAAACTGGCAAAACAAAAGCCTTGTCCACTTCACTCTCC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCAAAATAAAACTGGCAAAACAAAAGCCTTGTCCACTTCACTCTCC  635

seq1  CAGTGCCGAGACCCCGTCCACCTGAACCTGTTCAAGTCTCGTGCACGCCA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCCGAGACCCCGTCCACCTGAACCTGTTCAAGTCTCGTGCACGCCA  685

seq1  CCACAGTCCCTGTGAACCCTGAGACTCTCTCACTTCCATTGTCTATGTGA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGTCCCTGTGAACCCTGAGACTCTCTCACTTCCATTGTCTATGTGA  735

seq1  AGACCTGACCCCTTGGACTCAGTCACCACCTCCAGCTCTTAGAGTCTCTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTGACCCCTTGGACTCAGTCACCACCTCCAGCTCTTAGAGTCTCTT  785

seq1  GACCTTTTCTTCTCCATAAATCCTTGTCTTGAGGAGAGGGATTTGATGAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTTTCTTCTCCATAAATCCTTGTCTTGAGGAGAGGGATTTGATGAA  835

seq1  GACATCTGACTTCGAATTGAGTGCTCCAAAGTCTCTCCCTCTCTGCATCT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATCTGACTTCGAATTGAGTGCTCCAAAGTCTCTCCCTCTCTGCATCT  885

seq1  TTCCCGCTTGTGGGTCTCTTTGGTAATTCCTATGTACTACAGTAAGAAGC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCGCTTGTGGGTCTCTTTGGTAATTCCTATGTACTACAGTAAGAAGC  935

seq1  GTCCCTGCTGAGGCTGAGTGAGGACCGATCTATGGGTATAGCAGTGTGTC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTGCTGAGGCTGAGTGAGGACCGATCTATGGGTATAGCAGTGTGTC  985

seq1  ACTAGGTCACTAGGTCACTAGGAGTCTTTTTTGTTTTTTTGGCTTTTTGG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGTCACTAGGTCACTAGGAGTCTTTTTTGTTTTTTTGGCTTTTTGG  1035

seq1  TTTTTTTTTTTTTTTTGTTTTGTTTTTTTTTTTGTTTTTTTTTGAGACAG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTGTTTTGTTTTTTTTTTTGTTTTTTTTTGAGACAG  1085

seq1  GGTTTCTCTGTGTAGCCCTGGCTATTCTG  1126
      |||||||||||||||||||||||||||||
seq2  GGTTTCTCTGTGTAGCCCTGGCTATTCTG  1114

seq1: chr2_127953006_127954031
seq2: B6Ng01-285I10.g_67_1105

seq1  GAATTCCCGCAAAGCGCGCGCCGTCCCGGCCTGGCCCAGGGGTGGGGCGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCGCAAAGCGCGCGCCGTCCCGGCCTGGCCCAGGGGTGGGGCGG  50

seq1  GGCGCAAAGCGAAGCTGCCCGGCCCCCTAAGTTCCAGCCGGAGCTGCGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGCAAAGCGAAGCTGCCCGGCCCCCTAAGTTCCAGCCGGAGCTGCGGT  100

seq1  GGCCGGCACAGTCTGAGCGGCGCTGGGCGGCGAGTTTGTCAACAATCGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCGGCACAGTCTGAGCGGCGCTGGGCGGCGAGTTTGTCAACAATCGCC  150

seq1  TTGCCTTCGGCTGCCTGACCCGTAGGCGCCGCCCCCACCGCCTCTGCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTTCGGCTGCCTGACCCGTAGGCGCCGCCCCCACCGCCTCTGCCCA  200

seq1  TTGGTTACGATGGGGAGCGACTGCGCGCGGGCCAATGGGGGAGCACTGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTACGATGGGGAGCGACTGCGCGCGGGCCAATGGGGGAGCACTGGC  250

seq1  AGCCGGCGCCAGGGGCGCAGGGCTGGCGGTGCCCGCGCGGCGGCGGGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCGGCGCCAGGGGCGCAGGGCTGGCGGTGCCCGCGCGGCGGCGGGAGC  300

seq1  TGCGCGCTAGGGGCGGAGCGGGAGGAGGCGGAGGATGATCCCGGCGGCGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGCGCTAGGGGCGGAGCGGGAGGAGGCGGAGGATGATCCCGGCGGCGG  350

seq1  CCGGTGCAGCGCGGGCCAGAGGCGCGGCGCGCGAAACCTTCGGCTCCCCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGTGCAGCGCGGGCCAGAGGCGCGGCGCGCGAAACCTTCGGCTCCCCG  400

seq1  GCGGAGCGTGGCGGAGGGCGGACGGGCAGGCGCGGGGCCCTGGAGCCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGAGCGTGGCGGAGGGCGGACGGGCAGGCGCGGGGCCCTGGAGCCCAG  450

seq1  GACCCGGCTTTGTTTCCCTTGCCTCCTCGGTGGCGACGTGCAGGGGTCGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCGGCTTTGTTTCCCTTGCCTCCTCGGTGGCGACGTGCAGGGGTCGT  500

seq1  TCGATCGGCGCAACACGCCGCGCTCGGAAGGGAAGGGGCGGACGTGAGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGATCGGCGCAACACGCCGCGCTCGGAAGGGAAGGGGCGGACGTGAGTC  550

seq1  TCGGCATGGTGGCCCGGGGAGGGAAAGAGTCAGCCTTGCGCCGGGTATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGCATGGTGGCCCGGGGAGGGAAAGAGTCAGCCTTGCGCCGGGTATTG  600

seq1  CCAAGAACGCGCAGCTAGGTGTGGAACTTTCAAAGGGATGTCTCTTAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAACGCGCAGCTAGGTGTGGAACTTTCAAAGGGATGTCTCTTAAGG  650

seq1  CCCTCTTTGGAAGTGTGCACATTCCGGCAAGGTTGCACCCGAGAGAAGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTTTGGAAGTGTGCACATTCCGGCAAGGTTGCACCCGAGAGAAGTG  700

seq1  GTTTAGTGTTTGGGGTGGCGCGCAGGGCAGGCAGCAGGAGGGACCTTGCG  750
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GTTTAGTGTTTGGGGTGGCGCGCAGGGCA-GCAGCAGGAGGGACCTTGCG  749

seq1  GCCGAGGGCGCTCGACCCGGGCGGAGCTGCGCTCGGAGTTACAAACTCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GCCGAGGGCGCTCGACCCGGGCGGAGCTGCGCTCGGAGTTACAAAGTCTA  799

seq1  -TTGTGACGCACTTACTACGACTGACGGCCGCTGCCAAACCTTCTCCAGA  849
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGACGCACTTACTACGACTGACGGCCGCTGCCAAACCTTCTCCAGA  849

seq1  CTTGCTGCCCTCAGCATTTTCGGCAAA-CAATGGGG-CCGGAGCAGGGAA  897
      ||||||||||||||||||||||||||| |||||||| |||||||||||||
seq2  CTTGCTGCCCTCAGCATTTTCGGCAAACCAATGGGGCCCGGAGCAGGGAA  899

seq1  -GGCGGCCAGCCGCCTGCAATCTCTGCATCTGCG-CCCGC-TCCTGTGC-  943
       ||||||||||||||||||||||||||||||||| ||||| |||||||| 
seq2  GGGCGGCCAGCCGCCTGCAATCTCTGCATCTGCGCCCCGCTTCCTGTGCT  949

seq1  TCCAGCTCCGCATCTG-AGCCC-GGGAAATGAG--AGCCCGCTGGGATTT  989
      |||||||||||||||| ||||| ||||||||||  ||||   ||||| ||
seq2  TCCAGCTCCGCATCTGAAGCCCGGGGAAATGAGAAAGCCGCTTGGGAATT  999

seq1  TCAGACTTG-ATTCAAGTTTGTCCTGAAGG--AAAGCACG  1026
      ||||||||| ||||||||||||||||||||   |||||||
seq2  TCAGACTTGAATTCAAGTTTGTCCTGAAGGGATAAGCACG  1039