BAC Information

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BAC

Clone NameB6Ng01-286C04
Chromosome2 (Build37)
Map Location 69,748,733 - 69,862,832
singlet/doubletdoublet
Overlap geneZfp650
Upstream geneLass6, Nostrin, Spc25, G6pc2, Abcb11, Dhrs9, Lrp2, Bbs5, Kbtbd10, Fastkd1, Ppig, 4930578N16Rik, Phospho2, LOC433432, Klhl23, Ssb, Mettl5, 4930550G17Rik
Downstream geneMyo3b, LOC100040021, Sp5, 4933404M02Rik, LOC100040068, Gad1, LOC100039766, Gorasp2, Tlk1, Mettl8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-286C04.bB6Ng01-286C04.g
ACCGA084408GA084409
length8611,185
definitionB6Ng01-286C04.b B6Ng01-286C04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,748,733 - 69,749,592)(69,861,645 - 69,862,832)
sequence
gaattctgtactatagccgtaggttttttgaatttaaaatttactttcct
tttctaaacaagtaaaattgttaagaaacatgtgattacttattaagatc
ttgttcaaatctaagaaaaatgaacgaatgaatataaataatatgttctt
ggttttactatgacatttttaaaaaaagattttatttattattatatatg
agtacactgtagctgtcttcagacacaccagaagagggcatcagatctca
ttgcaaatggttgtgagccactatgtggtttctgggatttgaactcagga
cctttggaagagcagtcagtgctcttaaccgctgagccatctctctagcc
cagacattttctttatcatatactagtctaaatgtaacaatcacttaatc
atttaaatttcatgctgaaagttgagaggaaggagttaattaggaatgtt
tgagaaattgacgccgttaggaactgcagtaatgagccccagggcaggaa
gcagggttgccaaggtttgtgggggaagttaggtaggtggcacctgattt
gtgtggactttcctcttttgtctagcaatgacttatctattatcaattag
ggtttgctctaagctataaacaatattttgatcagagtttcaagctctgc
aatttcctattatatacagacatccccattccttttttgaaatttccaaa
catttatgtagcgagtatagtgtataggaaggatgaaaggaaaaaaaaaa
agccattgtcaggaattgtagtgatgatagagagatgggtcggtggttaa
gagcactgactgctcttccaaaggttttgagtttcattccaagcaaccac
ttggtagttca
gaattctgcccatttgctcatcactgttgaatgaaagggtgattgctata
atcaggcagttatgaggcctgaggaaaggcctggtgtgagcaggaggggt
ggagccagtcttcatttatcacctctccacagctggcaactatgaggtat
atcacagaagatgtatcttggtgatttgattctcgtggacaaaaccatgg
gttttggttttgttgatgctttattttgttgttttcggacatgaactaaa
aaaacaaaaacaaaaacaaacaaaacaaaaaacaaaaggaacctgagact
gagcagttacaatcccaaaggcagtaaagtaaggaaggctgggttacacc
ctcttcagtgcttatggtcagcgtctttcatagatcataaaaacaataaa
taccagaacgtataaacggaattactattactctgtcctggtgaactaca
ggacagaggtgcactgatgagaatggtcagttcatggaagaccacggacc
cctcaagacaaatgcccttacgaagcagtttccaggcctaggtaggaact
ctcagcagacaacaggccagagtcatgcttctgcacctagcacaaacact
taacacttagcaaaagtgtgatcgtaagaccacacaaaactaacaggacc
tggtccttcaggaggaggcaagagaacacagtgaaaggcggttcctaatt
accccatcactctcctatgtcattctcaatatcattggaaaagaaaacat
aaacattcaacattataaggatcttgcacaaagcaaatgacagtaggttt
tattaacatatcttacaacgtcaattattcctagttttgtaatttctgct
taattataaaggttgatttcacttctacagtaatgtactgtatttaaatg
atcattcatacaagatcacaccagtacatgtttttgaataatatacacac
atcactctaacttggacctgttattttaaaagtggtttataaatgggact
tataaaagttagggaatggaggttcctattagcagcatgcatgttatttt
attccaggtaccatttccacccagtgcctttttttaaaattactggtgac
taatcaccatatccaaataaacacctatccaaattcgagttaaggtgaag
cctaattttcactttcacatccatatgtgcacaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_69748733_69749592
seq2: B6Ng01-286C04.b_42_902

seq1  GAATTCTGTACTATAGCCGTAGGTTTTTTGAATTTAAAATTTACTTTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTACTATAGCCGTAGGTTTTTTGAATTTAAAATTTACTTTCCT  50

seq1  TTTCTAAACAAGTAAAATTGTTAAGAAACATGTGATTACTTATTAAGATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAAACAAGTAAAATTGTTAAGAAACATGTGATTACTTATTAAGATC  100

seq1  TTGTTCAAATCTAAGAAAAATGAACGAATGAATATAAATAATATGTTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCAAATCTAAGAAAAATGAACGAATGAATATAAATAATATGTTCTT  150

seq1  GGTTTTACTATGACATTTTTAAAAAAAGATTTTATTTATTATTATATATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTACTATGACATTTTTAAAAAAAGATTTTATTTATTATTATATATG  200

seq1  AGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGGCATCAGATCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGGCATCAGATCTCA  250

seq1  TTGCAAATGGTTGTGAGCCACTATGTGGTTTCTGGGATTTGAACTCAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAAATGGTTGTGAGCCACTATGTGGTTTCTGGGATTTGAACTCAGGA  300

seq1  CCTTTGGAAGAGCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCTAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGGAAGAGCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCTAGCC  350

seq1  CAGACATTTTCTTTATCATATACTAGTCTAAATGTAACAATCACTTAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACATTTTCTTTATCATATACTAGTCTAAATGTAACAATCACTTAATC  400

seq1  ATTTAAATTTCATGCTGAAAGTTGAGAGGAAGGAGTTAATTAGGAATGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAATTTCATGCTGAAAGTTGAGAGGAAGGAGTTAATTAGGAATGTT  450

seq1  TGAGAAATTGACGCCGTTAGGAACTGCAGTAATGAGCCCCAGGGCAGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAATTGACGCCGTTAGGAACTGCAGTAATGAGCCCCAGGGCAGGAA  500

seq1  GCAGGGTTGCCAAGGTTTGTGGGGGAAGTTAGGTAGGTGGCACCTGATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGTTGCCAAGGTTTGTGGGGGAAGTTAGGTAGGTGGCACCTGATTT  550

seq1  GTGTGGACTTTCCTCTTTTGTCTAGCAATGACTTATCTATTATCAATTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGACTTTCCTCTTTTGTCTAGCAATGACTTATCTATTATCAATTAG  600

seq1  GGTTTGCTCTAAGCTATAAACAATATTTTGATCAGAGTTTCAAGCTCTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGCTCTAAGCTATAAACAATATTTTGATCAGAGTTTCAAGCTCTGC  650

seq1  AATTTCCTATTATATACAGACATCCCCATTCCTTTTTTGAAATTTCCAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCCTATTATATACAGACATCCCCATTCCTTTTTTGAAATTTCCAAA  700

seq1  CATTTATGTAGCGAGTATAGTGTATAGGAAGGATGAAAGG-AAAAAAAAA  749
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CATTTATGTAGCGAGTATAGTGTATAGGAAGGATGAAAGGAAAAAAAAAA  750

seq1  AGCCATTGTCAGGAATTGTAGTGATGATAGAGAGATGGGTCGGTGGTTAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATTGTCAGGAATTGTAGTGATGATAGAGAGATGGGTCGGTGGTTAA  800

seq1  GAGCACTGACTGTTCTTCCAGAGGTTTTGAGTTCAATTCCCAACAACCAC  849
      |||||||||||| ||||||| ||||||||||||  ||||| | |||||||
seq2  GAGCACTGACTGCTCTTCCAAAGGTTTTGAGTTTCATTCCAAGCAACCAC  850

seq1  GTGGTAGTTCA  860
       ||||||||||
seq2  TTGGTAGTTCA  861

seq1: chr2_69861645_69862832
seq2: B6Ng01-286C04.g_67_1251 (reverse)

seq1  GTTGTG--CATATGGATGTG-AAGTGAAAATATTAGCCTTAACTTTAA--  45
      ||||||  |||||||||||| ||||||||  ||||| ||| || ||||  
seq2  GTTGTGCACATATGGATGTGAAAGTGAAA--ATTAGGCTTCACCTTAACT  48

seq1  --AATTTGGATATTTGATAGTGTTTATTTTGATATTGGTGAATTAGTCAC  93
        ||||||||||       |||||||||| |||| ||||| |||||||||
seq2  CGAATTTGGATA------GGTGTTTATTTGGATA-TGGTG-ATTAGTCAC  90

seq1  CAGTAAATTTTAAAAAAAGCACTTGGTTGAAATTGTA-CTTGAATAAA--  140
      |||||| ||| |||||| ||||| ||| ||||| ||| || |||||||  
seq2  CAGTAATTTTAAAAAAAGGCACTGGGTGGAAATGGTACCTGGAATAAAAT  140

seq1  TACATGCATGCTGCTAAATTAGAACCTCCATTCCCCTAACTTTTATAAGT  190
       |||||||||||||| |||  ||||||||||| |||||||||||||||||
seq2  AACATGCATGCTGCT-AATAGGAACCTCCATT-CCCTAACTTTTATAAGT  188

seq1  CCCATTTATAAACCCACTTTTAAAATAACAGGTCCAAGTTAGAGTGATGT  240
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CCCATTTATAAA-CCACTTTTAAAATAACAGGTCCAAGTTAGAGTGATGT  237

seq1  GTGTATATTATTCAAAAACATGTACTGGTGTGATCTTGTATGAATGATCA  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATATTATTCAAAAACATGTACTGGTGTGATCTTGTATGAATGATCA  287

seq1  TTTAAATACAGTACATTACTGTAGAAGTGAAATCAACCTTTATAATTAAG  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATACAGTACATTACTGTAGAAGTGAAATCAACCTTTATAATTAAG  337

seq1  CAGAAATTACAAAACTAGGAATAATTGACGTTGTAAGATATGTTAATAAA  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATTACAAAACTAGGAATAATTGACGTTGTAAGATATGTTAATAAA  387

seq1  ACCTACTGTCATTTGCTTTGTGCAAGATCCTTATAATGTTGAATGTTTAT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACTGTCATTTGCTTTGTGCAAGATCCTTATAATGTTGAATGTTTAT  437

seq1  GTTTTCTTTTCCAATGATATTGAGAATGACATAGGAGAGTGATGGGGTAA  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTTTTCCAATGATATTGAGAATGACATAGGAGAGTGATGGGGTAA  487

seq1  TTAGGAACCGCCTTTCACTGTGTTCTCTTGCCTCCTCCTGAAGGACCAGG  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAACCGCCTTTCACTGTGTTCTCTTGCCTCCTCCTGAAGGACCAGG  537

seq1  TCCTGTTAGTTTTGTGTGGTCTTACGATCACACTTTTGCTAAGTGTTAAG  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTTAGTTTTGTGTGGTCTTACGATCACACTTTTGCTAAGTGTTAAG  587

seq1  TGTTTGTGCTAGGTGCAGAAGCATGACTCTGGCCTGTTGTCTGCTGAGAG  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTGCTAGGTGCAGAAGCATGACTCTGGCCTGTTGTCTGCTGAGAG  637

seq1  TTCCTACCTAGGCCTGGAAACTGCTTCGTAAGGGCATTTGTCTTGAGGGG  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTACCTAGGCCTGGAAACTGCTTCGTAAGGGCATTTGTCTTGAGGGG  687

seq1  TCCGTGGTCTTCCATGAACTGACCATTCTCATCAGTGCACCTCTGTCCTG  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGTGGTCTTCCATGAACTGACCATTCTCATCAGTGCACCTCTGTCCTG  737

seq1  TAGTTCACCAGGACAGAGTAATAGTAATTCCGTTTATACGTTCTGGTATT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCACCAGGACAGAGTAATAGTAATTCCGTTTATACGTTCTGGTATT  787

seq1  TATTGTTTTTATGATCTATGAAAGACGCTGACCATAAGCACTGAAGAGGG  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTTTTTATGATCTATGAAAGACGCTGACCATAAGCACTGAAGAGGG  837

seq1  TGTAACCCAGCCTTCCTTACTTTACTGCCTTTGGGATTGTAACTGCTCAG  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACCCAGCCTTCCTTACTTTACTGCCTTTGGGATTGTAACTGCTCAG  887

seq1  TCTCAGGTTCCTTTTGTTTTTTGTTTTGTTTGTTTTTGTTTTTGTTTTTT  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGGTTCCTTTTGTTTTTTGTTTTGTTTGTTTTTGTTTTTGTTTTTT  937

seq1  TAGTTCATGTCCGAAAACAACAAAATAAAGCATCAACAAAACCAAAACCC  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCATGTCCGAAAACAACAAAATAAAGCATCAACAAAACCAAAACCC  987

seq1  ATGGTTTTGTCCACGAGAATCAAATCACCAAGATACATCTTCTGTGATAT  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTTTGTCCACGAGAATCAAATCACCAAGATACATCTTCTGTGATAT  1037

seq1  ACCTCATAGTTGCCAGCTGTGGAGAGGTGATAAATGAAGACTGGCTCCAC  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCATAGTTGCCAGCTGTGGAGAGGTGATAAATGAAGACTGGCTCCAC  1087

seq1  CCCTCCTGCTCACACCAGGCCTTTCCTCAGGCCTCATAACTGCCTGATTA  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCTGCTCACACCAGGCCTTTCCTCAGGCCTCATAACTGCCTGATTA  1137

seq1  TAGCAATCACCCTTTCATTCAACAGTGATGAGCAAATGGGCAGAATTC  1188
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAATCACCCTTTCATTCAACAGTGATGAGCAAATGGGCAGAATTC  1185