BAC Information

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BAC

Clone NameB6Ng01-286C07
Chromosome2 (Build37)4 (Build37)
Map Location 56,900,824 - 56,901,200126,881,104 - 126,882,169
singlet/doubletsingletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC227920, Nr4a2, LOC100041900, LOC100042910, Gpd2, LOC271788, Galnt5, A330104H05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-286C07.bB6Ng01-286C07.g
ACCGA084414GA084415
length7001,072
definitionB6Ng01-286C07.b B6Ng01-286C07.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(56,900,824 - 56,901,200)(126,881,104 - 126,882,169)
sequence
gaattcatgaaattcttaggcaaatggatctggaggatatcatcctgagt
gaggtaacccaatcacaaaagaacacacatgatatgcactcactgataag
cagatattagcccagaaacttgtatccaagatacaatttgcaaaacagat
gaaactcagtaagaaggaagaccaaagtgtggatactttgctccttctta
gaatggggaataaaatacccatggaaggagttacagagacaaagttcgga
gttgaaacggaaggaaggaccatccagagactgccccacctggggatcca
tcccatatacaaccaccaaacccagacactattgcatatgccagcaagat
tttgctgacaggaccctgatatagctctctcttgtgaggctatgccagtg
cctggcaaatacagaagtggatactcacagtcatctattggatggaacac
agggcccctaatgaaggagctagagaaagtacccaaggagctgaaggggt
ctgcaaccctataggaggaacaacaatatgaactaaccagtacccccccc
cccagctgtgtctctagttgcatatgtagcagaggagggcctagtcggcc
atcagtgagaggagaggcccttggtcttgtgaagatcatatgccccagta
caggggaatgccagggccaggaagcaggagtgggtgggttgggaagcagg


gaattccaggacagccagggctacatggataaaccccgtctcaaaagcac
aacagtggcaacaacaaaaatcattttctttaaataaaaaagttaaaagg
attctaagggcaggtgatggctcagcgagtggaggagcttgtcgtggtgc
ctggtgtcttgagtttgatctctgaaacccacatgagagaaagaacaaga
cccccccacaagttgtcttctgatctctacatgtacactgtaggacacac
agacaaaagaattctggggctataacgcagtagtacagtattaccacaga
tgtgcaaggccctggcactgaaggacagacagtgagcattgtcactgtga
gatgacaaagaacgtaaaggtgattgccaccgccaggactgatgtcctca
gatctgagttttccaagttgtcttccacgtgtgtgccaaagcacacaata
acacaggcaaaagtgcataaataaatgagtaataaataaataactgtaat
actaataacaacagtaaaatgtctttttttttcaaacactatgagaacac
aagtccctcagcagaggacagcaccatagctggtatgctaatacttcatt
tccagtacctagagtttctggaaacagtgggttttgtgtggacactgggg
ggaaaacctgggccttgctcacgccaggaaagtattctgtcactgagcta
gaacctccctcccccacccccaaataagtttctatggcttaaaaagggaa
caaagaggtcatcaaaattaaagtaccctaaggactgtgcattattcaga
gcaagagtaggaagcctttgtctctttcagatgaagtcaaggatgcacat
ttaaatttacaggagtaaccataaagaataaaatggagtgtgtaactgtc
aaaccagcattgggaattggcagagagagggagagagcaaacaccatcat
tccaaaggggcagataagcacaaacttccactgggtggtgctgacataaa
cttgttcatcagccctcatgaggctgaaggcaagagatggccacaagttt
taggccagcttgggccttcata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_56900824_56901200
seq2: B6Ng01-286C07.b_371_748 (reverse)

seq1  CCTGCTCCCCAACCAACCCACTCCTGCTTCCCGGCCCTGGTGTTCCCCTG  50
      |||||| ||||||| |||||||||||||||| ||||||||  ||||||||
seq2  CCTGCTTCCCAACCCACCCACTCCTGCTTCCTGGCCCTGGCATTCCCCTG  50

seq1  TTCTGGGGCATATGGTTTTCACAAGACCAAGGGCCTCTCCTCCTACTGAT  100
      | |||||||||||| | |||||||||||||||||||||||||  ||||||
seq2  TACTGGGGCATATGATCTTCACAAGACCAAGGGCCTCTCCTCTCACTGAT  100

seq1  GGCCGACTAGGCCATCCTCTGCTACATATGCAGCTAGAGACACGAGTT--  148
      ||||||||||||| |||||||||||||||||| |||||||||| || |  
seq2  GGCCGACTAGGCCCTCCTCTGCTACATATGCAACTAGAGACAC-AGCTGG  149

seq1  -CTGGGGGGTACTGGTTAGCTCATATTGTTGTTCCACCTATAGGGTTGCA  197
         |||||||||||||||| ||||||||||||||| ||||||||||||||
seq2  GGGGGGGGGTACTGGTTAGTTCATATTGTTGTTCCTCCTATAGGGTTGCA  199

seq1  GACCCCTTCAGCTCCTTGGGTACTTTCTCTAGCTCCTTTCATTGTAGGCC  247
      |||||||||||||||||||||||||||||||||||| ||||||   ||||
seq2  GACCCCTTCAGCTCCTTGGGTACTTTCTCTAGCTCC-TTCATTAGGGGCC  248

seq1  CTGTGTTCCATCCAATAGATGACTGTGAGCATCCACTTCTGTATTTGCCA  297
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CTGTGTTCCATCCAATAGATGACTGTGAGTATCCACTTCTGTATTTGCCA  298

seq1  GGCACTGGCGTAGCCTCACGAGAGACAGCTATATCAGGGTCCTGTCAGGA  347
      ||||||||| ||||||||| ||||| |||||||||||||||||||||| |
seq2  GGCACTGGCATAGCCTCACAAGAGAGAGCTATATCAGGGTCCTGTCAGCA  348

seq1  AAATCTTGCTGGTGTATGCAATAGTGTCTG  377
      ||||||||||||  ||||||||||||||||
seq2  AAATCTTGCTGGCATATGCAATAGTGTCTG  378


seq1: chr4_126881104_126882169
seq2: B6Ng01-286C07.g_71_1142 (reverse)

seq1  TATGAA-GCCCAGGCTGGCCTATAACTTGTGCCCATCCTCTTGCC-TCAG  48
      |||||| ||||| ||||||||| |||||||| |||| |||||||| ||||
seq2  TATGAAGGCCCAAGCTGGCCTAAAACTTGTGGCCAT-CTCTTGCCTTCAG  49

seq1  CCTCATGAGGGCTGATG-ACAAGTTTATGTCAGCA-CACCCAGTGG-AGT  95
      ||||||||||||||||| ||||||||||||||||| |||||||||| |||
seq2  CCTCATGAGGGCTGATGAACAAGTTTATGTCAGCACCACCCAGTGGAAGT  99

seq1  TTGTGCTTTTCTGCCCCTTTTGGATTGATGGTGTTTGCTCTCTCCCTCTC  145
      |||||||| |||||||| |||||| |||||||||||||||||||||||||
seq2  TTGTGCTTATCTGCCCC-TTTGGAATGATGGTGTTTGCTCTCTCCCTCTC  148

seq1  TCTGCCAAATCCC-ATGCTGGTTTGACAGTTACACACTCCATTTTATTCT  194
      |||||||| |||| ||||||||||||||||||||||||||||||||||||
seq2  TCTGCCAATTCCCAATGCTGGTTTGACAGTTACACACTCCATTTTATTCT  198

seq1  TTATGGTTACTCCTGT-AATTTTAATGTGCATCCTTGACTTCATCTGAAG  243
      |||||||||||||||| ||||| |||||||||||||||||||||||||| 
seq2  TTATGGTTACTCCTGTAAATTTAAATGTGCATCCTTGACTTCATCTGAAA  248

seq1  GAGAC-AAGGCTTCCTACTCTTGCTCTGAATAATGCACAGTCCTTAGGGT  292
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAAAGGCTTCCTACTCTTGCTCTGAATAATGCACAGTCCTTAGGGT  298

seq1  ACTTTAATTTTGATGACCTCTTTGTTCCCTTTTTAAGCCATAGAAACTTA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAATTTTGATGACCTCTTTGTTCCCTTTTTAAGCCATAGAAACTTA  348

seq1  TTTGGGGGTGGGGGAGGGAGGTTCTAGCTCAGTGACAGAATACTTTCCTG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGGGTGGGGGAGGGAGGTTCTAGCTCAGTGACAGAATACTTTCCTG  398

seq1  GCGTGAGCAAGGCCCAGGTTTTCCCCCCAGTGTCCACACAAAACCCACTG  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGAGCAAGGCCCAGGTTTTCCCCCCAGTGTCCACACAAAACCCACTG  448

seq1  TTTCCAGAAACTCTAGGTACTGGAAATGAAGTATTAGCATACCAGCTATG  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGAAACTCTAGGTACTGGAAATGAAGTATTAGCATACCAGCTATG  498

seq1  GTGCTGTCCTCTGCTGAGGGACTTGTGTTCTCATAGTGTTTGAAAAAAAA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGTCCTCTGCTGAGGGACTTGTGTTCTCATAGTGTTTGAAAAAAAA  548

seq1  AGACATTTTACTGTTGTTATTAGTATTACAGTTATTTATTTATTACTCAT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATTTTACTGTTGTTATTAGTATTACAGTTATTTATTTATTACTCAT  598

seq1  TTATTTATGCACTTTTGCCTGTGTTATTGTGTGCTTTGGCACACACGTGG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATGCACTTTTGCCTGTGTTATTGTGTGCTTTGGCACACACGTGG  648

seq1  AAGACAACTTGGAAAACTCAGATCTGAGGACATCAGTCCTGGCGGTGGCA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAACTTGGAAAACTCAGATCTGAGGACATCAGTCCTGGCGGTGGCA  698

seq1  ATCACCTTTACGTTCTTTGTCATCTCACAGTGACAATGCTCACTGTCTGT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCTTTACGTTCTTTGTCATCTCACAGTGACAATGCTCACTGTCTGT  748

seq1  CCTTCAGTGCCAGGGCCTTGCACATCTGTGGTAATACTGTACTACTGCGT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAGTGCCAGGGCCTTGCACATCTGTGGTAATACTGTACTACTGCGT  798

seq1  TATAGCCCCAGAATTCTTTTGTCTGTGTGTCCTACAGTGTACATGTAGAG  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCCCCAGAATTCTTTTGTCTGTGTGTCCTACAGTGTACATGTAGAG  848

seq1  ATCAGAAGACAACTTGTGGGGGGGTCTTGTTCTTTCTCTCATGTGGGTTT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAAGACAACTTGTGGGGGGGTCTTGTTCTTTCTCTCATGTGGGTTT  898

seq1  CAGAGATCAAACTCAAGACACCAGGCACCACGACAAGCTCCTCCACTCGC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGATCAAACTCAAGACACCAGGCACCACGACAAGCTCCTCCACTCGC  948

seq1  TGAGCCATCACCTGCCCTTAGAATCCTTTTAACTTTTTTATTTAAAGAAA  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCATCACCTGCCCTTAGAATCCTTTTAACTTTTTTATTTAAAGAAA  998

seq1  ATGATTTTTGTTGTTGCCACTGTTGTGCTTTTGAGACGGGGTTTATCCAT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTTTTGTTGTTGCCACTGTTGTGCTTTTGAGACGGGGTTTATCCAT  1048

seq1  GTAGCCCTGGCTGTCCTGGAATTC  1066
      ||||||||||||||||||||||||
seq2  GTAGCCCTGGCTGTCCTGGAATTC  1072


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