BAC Information

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BAC

Clone NameB6Ng01-286D23
Chromosome2 (Build37)
Map Location 14,150,915 - 14,152,069
singlet/doubletsinglet
Overlap geneMrc1
Upstream geneRsu1, Cubn, Trdmt1, Vim, St8sia6, Ptpla, Stam, 2010003H20Rik
Downstream geneSlc39a12, Cacnb2, LOC100041164, LOC625335, LOC625342, LOC100041220, Nsun6, Arl5b, LOC633061
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-286D23.bB6Ng01-286D23.g
ACCGA084494GA084495
length1,1611,132
definitionB6Ng01-286D23.b B6Ng01-286D23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaggcccatgcctaaacatagtaaaagcaatatacagcaaacca
gtagtcaacatcaaactaaatgaagagaaactttaagcattcccactaaa
atcagggactagacatggctggccactctctccctatctgttcaatatta
tacttgaagttctagctagaacaattagacaaaaaaaaagtcaaaggaat
acaaattggaaaggaagacgtcaaaatatcactaattgcagatgatatga
tagtatacttgatgactccaaaaattccaccagagaactcctaaacctga
aaaacatcttcattgaattagctggatataaaattaactcaaacaagtca
gtagccttcctgtactcaaaggataaactggctgagaaaaaaattaaaga
acaatataaaatatcttggtgtgactctaaccaaacaagtgaaaggcctg
tatgacaagaacttcaaatctctgaaaaaagaatgaaaacaaaaacaaaa
aacaaaaaacaaaaccacagaacatagaaagatctcccatgctcatggac
ttgcaggattaatatagtaaaaatggcccatcttgctgaaagcaatctac
agattcaatgtaatacccattaaaattccaactcaattctttattgagtt
agaaagagcaatttgtaaattcgtttggattaacaaaaaacctaggataa
caaaaacattctcaaaaataaaagaacatctgggggaaatcaccatccct
gacctcaagctgtactacagagaagtagtgtttaaaattgcatggtattg
gtacagtgacaggcagtagctcaatggaatagaactgaagtcccagaatg
aaccccacacacctatggtcacttgatctttgacaagaggttaataccat
ccagtgaaaaaaaggacagtattttaaacaaatggtgctggtcaactgca
gtcaacatgtagagatgcaaattgttcatctatctccctgtacaaaactc
agtcagaagatcagacctccaataacgataccactgatctaatagacgac
aagtggggaaagcctcaaccaatagaccgggaaattcctgaatggcacca
atgcctatggcttagatcgatgcaatgaccttaattgccaagcttctgta
gggccaaagga
gaattcctgtttttctaaccgcccccatgtgacaggatatctctcaattg
gagggttttcctaaattcaggagtcctttaaaagggacagcttcctctgt
cctccttttcagtcaggcagctcccagaccttggactgagcaaaggggca
acctggggacctggttgtattctttgcctttcccagtctccctcttctcc
ctcattggaagatccactctgggccatgaggcttctcctgcttctggctt
ttatctctgtcatccctgtctctgttcagctattgggtaagtctgttttg
aggtgggggctttgcataccattttgtttgaagtttatgctaaaagtcct
gtgtacatctggaagaggaattgagcgatctgtgtttttacctgaccttc
atcaagcttgcacttggctttgacctgaacacaccagggtgggagttgag
ctagagtcaggcgatgctgttgctctctgttgttagatgttgtccaagat
gaagccccccagcacctccgtcctcctgaggacatcatgtctgggtattt
ctacctggtttgtgcaatgccttcttgttttgttgcttgccctagttcta
gtttccagtttatgccgttgctatcctactcccaatagatagcgctgagt
atctcgggtggggaaagaggaacttgcagcccctcgtcctagatgcaaat
tgataaggagaggacgcggggattctcacactcgacttttcccgtgagcc
gtttcattcataatttctattgctagaaagtccgcccttttctgcttcca
gaattgttcatattgtctcacaggtggatgtgttcgatgctgaagtctga
aagtggttgatatgtccgtaggaacagatcaggctctttagatgcgcaag
gcattgctgagtcagcgtttctctggattcttagcacagtatggaaggac
tgggagagtttgcactcccagtctatttcgagactattttggcttttcac
acccttcacttcatcagaacactaaagctgctggaccaggtccgtacctg
gtctagccgaagtcctgtggtgacgctgatgcagaaatctctagaactga
ttgataagatttctcagtttcttagagtttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_14150915_14152069
seq2: B6Ng01-286D23.g_66_1197

seq1  GAATTCCTGTTTTTCTAACCGCCCCCATGTGACAGGATATCTCTCAATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTTTTTCTAACCGCCCCCATGTGACAGGATATCTCTCAATTG  50

seq1  GAGGGTTTTCCTAAATTCAGGAGTCCTTTAAAAGGGACAGCTTCCTCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTTTTCCTAAATTCAGGAGTCCTTTAAAAGGGACAGCTTCCTCTGT  100

seq1  CCTCCTTTTCAGTCAGGCAGCTCCCAGACCTTGGACTGAGCAAAGGGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTTTTCAGTCAGGCAGCTCCCAGACCTTGGACTGAGCAAAGGGGCA  150

seq1  ACCTGGGGACCTGGTTGTATTCTTTGCCTTTCCCAGTCTCCCTCTTCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGGGACCTGGTTGTATTCTTTGCCTTTCCCAGTCTCCCTCTTCTCC  200

seq1  CTCATTGGAAGATCCACTCTGGGCCATGAGGCTTCTCCTGCTTCTGGCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTGGAAGATCCACTCTGGGCCATGAGGCTTCTCCTGCTTCTGGCTT  250

seq1  TTATCTCTGTCATCCCTGTCTCTGTTCAGCTATTGGGTAAGTCTGTTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTCTGTCATCCCTGTCTCTGTTCAGCTATTGGGTAAGTCTGTTTTG  300

seq1  AGGTGGGGGCTTTGCATACCATTTTGTTTGAAGTTTATGCTAAAAGTCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGGGGCTTTGCATACCATTTTGTTTGAAGTTTATGCTAAAAGTCCT  350

seq1  GTGTACATCTGGAAGAGGAATTGAGCGATCTGTGTTTTTACCTGACCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTACATCTGGAAGAGGAATTGAGCGATCTGTGTTTTTACCTGACCTTC  400

seq1  ATCAAGCTTGCACTTGGCTTTGACCTGAACACACCAGGGTGGGAGTTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGCTTGCACTTGGCTTTGACCTGAACACACCAGGGTGGGAGTTGAG  450

seq1  CTAGAGTCAGGCGATGCTGTTGCTCTCTGTTGTTAGATGTTGTCCAAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGTCAGGCGATGCTGTTGCTCTCTGTTGTTAGATGTTGTCCAAGAT  500

seq1  GAAGCCCCCCAGCACCTCCGTCCTCCTGAGGACATCATGTCTGGGTATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCCCCCAGCACCTCCGTCCTCCTGAGGACATCATGTCTGGGTATTT  550

seq1  CTACCTGGTTTGTGCAATGCCTTCTTGTTTTGTTGCTTGCCCTAGTTCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTGGTTTGTGCAATGCCTTCTTGTTTTGTTGCTTGCCCTAGTTCTA  600

seq1  GTTTCCAGTTTATGCCGTTGCTATCCTACTCCCAATAGATAGCGCTGAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCAGTTTATGCCGTTGCTATCCTACTCCCAATAGATAGCGCTGAGT  650

seq1  ATCTCGGGTGGGGAAAGAGGAACTTGCAGCCCCTCGTCCTAGATGCAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCGGGTGGGGAAAGAGGAACTTGCAGCCCCTCGTCCTAGATGCAAAT  700

seq1  TGATAAGGAGAGGACGCGGGGATTCTCACACTCGACTTTTCCCGTGAGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAGGAGAGGACGCGGGGATTCTCACACTCGACTTTTCCCGTGAGCC  750

seq1  GTTTCATTCATAATTTCTATTGCTAGAAAGTCCGCCCTTTTCTGCTTCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCATTCATAATTTCTATTGCTAGAAAGTCCGCCCTTTTCTGCTTCCA  800

seq1  GAATTGTTCATATTGTCTCACAGGTGGATGTGTTCGATGCTGAAGTCTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGTTCATATTGTCTCACAGGTGGATGTGTTCGATGCTGAAGTCTGA  850

seq1  AAGTGGTTGATATGTCCGTAGGAACAGATCAGGGCTCTTTAGATGCGCAA  900
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AAGTGGTTGATATGTCCGTAGGAACAGATCA-GGCTCTTTAGATGCGCAA  899

seq1  GGGCATTGCTGAGTCAGCGTTTCTCTGGATTCTTAAGCACCAGTATGGAA  950
       ||||||||||||||||||||||||||||||||| |||| ||||||||||
seq2  -GGCATTGCTGAGTCAGCGTTTCTCTGGATTCTT-AGCA-CAGTATGGAA  946

seq1  GGGACTGGGAGAGTTTGCACTCCCAGGTCTATTTCGAGACTATTTTGGCT  1000
       |||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  -GGACTGGGAGAGTTTGCACTCCCA-GTCTATTTCGAGACTATTTTGGCT  994

seq1  TTTCAACACCCTTCACTTCCATCAGACAACTAAAGCCTGCTGGACACAGT  1050
      |||| ||||||||||||| |||||||  ||||||| |||||||||   ||
seq2  TTTC-ACACCCTTCACTT-CATCAGAACACTAAAG-CTGCTGGACCAGGT  1041

seq1  TCGTACCCTTGGTCTTAGCCGAAGTCCTGTGGTGACGCTGATGCCAGGAA  1100
       ||||||  ||||| |||||||||||||||||||||||||||| |||  |
seq2  CCGTACC--TGGTC-TAGCCGAAGTCCTGTGGTGACGCTGATG-CAG--A  1085

seq1  ATTCTCTAGGGAACTGTATGATAAAGATTTTCTCAGTTTTCTTAGGAATG  1150
      | ||||||  ||||||  |||| |||| |||||||| ||||||||    |
seq2  AATCTCTA--GAACTGATTGAT-AAGA-TTTCTCAG-TTTCTTAG---AG  1127

seq1  TTTCC  1155
      |||||
seq2  TTTCC  1132