BAC Information

Click to search

BAC

Clone NameB6Ng01-286E21
Chromosome2 (Build37)
Map Location 134,113,153 - 134,114,374
singlet/doubletsinglet
Overlap genenone
Upstream geneA430048G15Rik, Bmp2
Downstream geneHao1, Txndc13, LOC627897, LOC433478, Plcb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-286E21.bB6Ng01-286E21.g
ACCGA084536GA084537
length1,2561,170
definitionB6Ng01-286E21.b B6Ng01-286E21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttattgtagttatgtacggcagactatattacttattagtagaa
agtccccacacacaatcacttagactaaaagccaagtcactcccatatac
aggaatttacaattgtttaggaattagatcaggctgtggtttaagaagga
accagagtattgcattattcatgagaaggttaggtagagcagaactccct
ctagaagttagaagtatggcttgggcgtgaaagcccttgccctgagagta
taaagacctcacacttggcttctaagaatatagctgaccttagatagagc
tgactttgtctcagttgttttattgcctagctcctgccagtctttatgta
ttcattcctctgttttgtgtaagagtcattaagtatccagtaacctcatt
gtgccttggctggtgtgccacctaacttccctattttcttctatattaaa
aatctgttgcttgctttgagaaattacattcagatacagcactctctctg
tgcctgtttctcacctttttgcctactccctgcccacccatactggaacc
ctgatttctcccgcagattgaggagggccaactgaggccagtcagtggca
gaggtagaatctcagggttgttttgatttgcatatccctgatgactaagg
atgttgaacatttctttaagtgtttttcagacatttggtattcctcagtt
gagcattctttgttttgctctgtaccccattttaaacagggttatttggt
tccctggagtctaacttcttgagttctttgtatatattggatattatccc
tctatcagatgtaggattagtaaagatcttttcctagtctgtggattgca
gcttgtcctattgacagtgccctttgccttacagaaactttgcaatttta
tgaggtcccatttgtcgattgttgatcttagagcatgagccattggtgtt
ctcttcaggaaattttccctgtgcccgtgtattcaaggctttttcccact
ttcctcttctattagttagtatatctagttttatgtggatgcccttgatc
cactgggacttgaggcttcttacaaggagaatagaaccggatccattggc
attccttcctacatgtgtggaccttcagtgaacaagaccacaattgttga
aaatgcgtgtctttccacttgatgttaactctctttgccaagatcagtaa
catggggttgggtaatcctggtcttcaattctatttccactgttggtaga
acactg
gaattcagatgtacattttattaatctaaaagttaggcaaacttaaacat
tagctgaaaagtttcatgctatggagtgagattcctccatccaaagtaag
acaggtccacatgcaaagtaagacatgtccagatgcaaaaataccaaggc
tggcacaagtgtgaatataagtaaaagctaatgacatatataatattaga
taattaggaaaccaaacatataattttttcatgtttctatgaattattta
taaattcataccttaaagtaggtgacctggactgttttatttatgctata
ttttgtgtacgcaatactataaacattagaatatttatataagggagaaa
tacactacctgtgattgctagaaaacttttctagttgcattttaaaacaa
tctagtttagggaattaaactataggtctctttgaaagcataatagtagt
aaagtaatacagtgaaatagaatatgggttaaccatctctggggaaaata
cctttattaaatagctattatttattactaacccagaaagaatataaaca
aaatgattcaagaaacatttaatctcatttttttaaattaagaaaaattt
atcaaaatgaataaatatgagaggcaatgctttgaaaataaaataacata
ggtaacttactaattaaatctataaaaaatagatgtataagtatacaaaa
ctagaaaaactgagacacagctacagttcttgaaagttatgatttttttt
agaggaagaaagaaagacagacagacaaagaccaatatcaagacatagac
aaagacaaagaccaagaccaagaccaagaccaagaccaagaccaagacca
agaccaagaccagaccaagaccaagaccagaccagacaaagacaagacaa
gacgacaagacaagacgacaagacaagacacgacagacaagacagacaga
caagacagacagacagacagacagacagacaggacagacagacaatgagt
caattcagaacagatagtactctaagaaatactagtagaactgacaaatc
tagcatcactgcttttcctactagaataccaaccttagactcggacctca
ttgggtaaggcatagagaaaccttggcgacggaaaggaaccttattaatt
caaaatattttttataaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_134113153_134114374
seq2: B6Ng01-286E21.g_68_1237 (reverse)

seq1  CATTTATAAAATAT-TTTTGATTTTAATA--GTTCCTCTTCCAACTTCGC  47
      ||||||||||| || ||||||  ||||||  |||||| |||   | ||||
seq2  CATTTATAAAAAATATTTTGA-ATTAATAAGGTTCCT-TTC---CGTCGC  45

seq1  CAAGATTTTCTCTACTGCCCTACCCACTGAGGTCTGAGTCTAGTGTTTGT  97
      ||||  |||||||| |||| |||||| ||||||| |||||||  ||| ||
seq2  CAAG-GTTTCTCTA-TGCCTTACCCAATGAGGTCCGAGTCTAAGGTTGGT  93

seq1  A-TCTAGTA-GAACAGCAGTGATGCTTAGGATTTGTCAGTTCTACTTAGT  145
      | ||||||| ||| ||||||||||||   |||||||||||||||| ||| 
seq2  ATTCTAGTAGGAAAAGCAGTGATGCT--AGATTTGTCAGTTCTAC-TAG-  139

seq1  TATTTCTTAGAAGTTAACTATCCTGTCTGAAATTTGACTTCATTTTTGTC  195
      |||||||||| |||  ||||||   ||||||  ||||| |||   |||||
seq2  TATTTCTTAG-AGT--ACTATCTGTTCTGAA--TTGAC-TCA---TTGTC  180

seq1  TTTGTCTTTGTCTTTGTCTTTGTCTTTGTCTTTGTCTTTGTCTTTGTCTT  245
        ||||  ||||  ||||  ||||  ||||  ||||  ||||  ||||  
seq2  --TGTC--TGTC-CTGTC--TGTC--TGTC--TGTC--TGTC--TGTC--  213

seq1  TGTCTTTGTCTTTGTCTTTGTCTTTGTCTTTGTCGTTGTCTTTGTCTTTG  295
      |||| |||||  ||||  |||| |||||  ||||| |||| ||||| |||
seq2  TGTC-TTGTC--TGTC--TGTC-TTGTC--TGTCG-TGTC-TTGTC-TTG  252

seq1  TCTGTCTTTGTCTTTGTCTGTCTTTGTCTTTGTCTTTGTCTTGGTCTTGG  345
      || ||| ||||| ||||| ||| ||||| ||||||||||| ||||| |||
seq2  TC-GTC-TTGTC-TTGTC-GTC-TTGTC-TTGTCTTTGTC-TGGTC-TGG  294

seq1  TCTTGGTCTTGGTCTTGGTCTTGGTCTTGGTCTTGGTCTTGGTCTTGGTC  395
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TCTTGGTCTTGGTC-TGGTCTTGGTCTTGGTCTTGGTCTTGGTCTTGGTC  343

seq1  TTGGTCTTGGTCTTGGTCTTTGTCTTTGTCTATGTCTTGATATTGGTCTT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCTTGGTCTTGGTCTTTGTCTTTGTCTATGTCTTGATATTGGTCTT  393

seq1  TGTCTGTCTGTCTTTCTTTCTTCCTCTAAAAAAAATCATAACTTTCAAGA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTCTGTCTTTCTTTCTTCCTCTAAAAAAAATCATAACTTTCAAGA  443

seq1  ACTGTAGCTGTGTCTCAGTTTTTCTAGTTTTGTATACTTATACATCTATT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAGCTGTGTCTCAGTTTTTCTAGTTTTGTATACTTATACATCTATT  493

seq1  TTTTATAGATTTAATTAGTAAGTTACCTATGTTATTTTATTTTCAAAGCA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATAGATTTAATTAGTAAGTTACCTATGTTATTTTATTTTCAAAGCA  543

seq1  TTGCCTCTCATATTTATTCATTTTGATAAATTTTTCTTAATTTAAAAAAA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTCTCATATTTATTCATTTTGATAAATTTTTCTTAATTTAAAAAAA  593

seq1  TGAGATTAAATGTTTCTTGAATCATTTTGTTTATATTCTTTCTGGGTTAG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATTAAATGTTTCTTGAATCATTTTGTTTATATTCTTTCTGGGTTAG  643

seq1  TAATAAATAATAGCTATTTAATAAAGGTATTTTCCCCAGAGATGGTTAAC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAATAATAGCTATTTAATAAAGGTATTTTCCCCAGAGATGGTTAAC  693

seq1  CCATATTCTATTTCACTGTATTACTTTACTACTATTATGCTTTCAAAGAG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATTCTATTTCACTGTATTACTTTACTACTATTATGCTTTCAAAGAG  743

seq1  ACCTATAGTTTAATTCCCTAAACTAGATTGTTTTAAAATGCAACTAGAAA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATAGTTTAATTCCCTAAACTAGATTGTTTTAAAATGCAACTAGAAA  793

seq1  AGTTTTCTAGCAATCACAGGTAGTGTATTTCTCCCTTATATAAATATTCT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTCTAGCAATCACAGGTAGTGTATTTCTCCCTTATATAAATATTCT  843

seq1  AATGTTTATAGTATTGCGTACACAAAATATAGCATAAATAAAACAGTCCA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTATAGTATTGCGTACACAAAATATAGCATAAATAAAACAGTCCA  893

seq1  GGTCACCTACTTTAAGGTATGAATTTATAAATAATTCATAGAAACATGAA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCACCTACTTTAAGGTATGAATTTATAAATAATTCATAGAAACATGAA  943

seq1  AAAATTATATGTTTGGTTTCCTAATTATCTAATATTATATATGTCATTAG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTATATGTTTGGTTTCCTAATTATCTAATATTATATATGTCATTAG  993

seq1  CTTTTACTTATATTCACACTTGTGCCAGCCTTGGTATTTTTGCATCTGGA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTACTTATATTCACACTTGTGCCAGCCTTGGTATTTTTGCATCTGGA  1043

seq1  CATGTCTTACTTTGCATGTGGACCTGTCTTACTTTGGATGGAGGAATCTC  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCTTACTTTGCATGTGGACCTGTCTTACTTTGGATGGAGGAATCTC  1093

seq1  ACTCCATAGCATGAAACTTTTCAGCTAATGTTTAAGTTTGCCTAACTTTT  1195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCATAGCATGAAACTTTTCAGCTAATGTTTAAGTTTGCCTAACTTTT  1143

seq1  AGATTAATAAAATGTACATCTGAATTC  1222
      |||||||||||||||||||||||||||
seq2  AGATTAATAAAATGTACATCTGAATTC  1170