BAC Information

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BAC

Clone NameB6Ng01-286G08
Chromosome2 (Build37)
Map Location 28,978,492 - 28,979,625
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfm1, Gm347, 1700007K13Rik, Mrps2, LOC665412, Gbgt1, Ralgds, Cel, Gtf3c5, Gfi1b, Tsc1, 1700026L06Rik, 1190002A17Rik, LOC665643, Gtf3c4, Ddx31, Barhl1, LOC100033452, 1700101E01Rik, LOC100039666, Ttf1
Downstream geneSetx, Ntng2, Crsp8, Rapgef1, LOC433415, OTTMUSG00000012686, Trub2, Coq4, Slc27a4, Urm1, LOC100041002, Ceecam1, Odf2, Gle1l, Spna2, LOC665532, Wdr34, Set, Pkn3, Zdhhc12, Zer1, LOC100041114
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-286G08.bB6Ng01-286G08.g
ACCGA084603GA084604
length8131,120
definitionB6Ng01-286G08.b B6Ng01-286G08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctcagctgaggcatcgcctctgtcagatcagcctgtgggtgtgt
aagtaatggtattttcttgattgttaattgatataggagagcccagtcca
ctgaggaacacactgtgtttaggcagacagaccaggtctgggtagtatgg
gatagctgagtgtgagcctggagcaagccaggagggagcagtgttcctct
ctgattctgcctccggctcctaccttgagttcctgctctgatttccctta
aaaaaaatcttacagctaggctgtaacttgtaagatgaaataagtccttt
acccccccccccaccagcttgtttttggtcatggtgtttattacatcaat
gggaagccaactgggacaaacaagtacctgcatgctctgttggtgaggat
acaaaatggatggcatggctgctttgccggacagttcagcagttccccac
aaagagaaagcacagttatcatttgtgcctgcaattccccgcccatgaga
aacgaaggcttgaaaaccttgcactaggtgtgttcacatcccgagtgtcc
atcaacagcagagaggacaaacagaacacagtgtctacctggacgagagg
atattgaaaggggagtagagcgccaaccacggtaccgcacagataaactt
gaaactctgtgctaaaggaaaccagccagtccccaagggcctgagtctga
ctccatgaacagtgaagagcaagcaaagccatagaggcagaaagtagatt
gatggttgccaagggctgggtaatgagggggtggggcgcttggggggtga
ttgggaagggtga
gaattcattctatagcccctgcttacctggaactcctggtgatcctcctg
cctccatctcctaagtgctactacgactgagggtaaaatctaaaatctaa
tcatgcaaagttaaaagtttgttggacttgttctattgtttgtagaaaaa
acaagggtgggaagattaaagaaatagccaagaagcttggatggaagtac
acattttgtgggctgcagaaaatgtcttcattttaatccacagaagtagc
aaagaccatgtttattactgttggtataaaggcaaatatactattacaag
gaaaacatctttgctagtctatacctttttttgttttgtcctgatttcat
aagtcaaaacatttttgtgcaccttataattattttggagggtatccagg
cctaagttattctatagcaaatcacatgtgtatatattatttatatttta
tgttatataattctaaaaatataatgtaacgtaatacttatttgtaatta
ttatatatttgctttttatttcatctttatgtgtaggagtgttttgcctg
cttgtatgtgcacccattgccggccccagagaagggcatctgttctcatc
acttaggaccgaagtttcagacagatgtgaactgcaatgtggcgctagaa
aattaactctgggtcctctggaagatcagtaagtgttcctaactgctgag
ctctcgctccagcgtcagacttgtgtttcttacactcaagagtaacttag
catttatgtcctttcacgaataaagcatggtatattgctgaagtctgaaa
tctgggttacgaattctgccaggatctgtatcatcagggacaaggaactg
cgggtagtttctatcatttcccctcatttctgaaaatttcagttagctat
cagagtcttgtttaaaaaaaactatcataaatgtgttacttttaaaacca
tgcatacatatagtgcttctagttgaaaccacttctgcaactttgatttt
gatagaaacttgacgaaatgaaaaaaaggggggagggaaaaaatacggtc
agctcactggccgctctgatgactaaggcccttctaccggtcatctgctg
cattatatcacacccccttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_28978492_28979625
seq2: B6Ng01-286G08.g_68_1187

seq1  GAATTCATTCTATAGCCCCTGCTTACCTGGAACTCCTGGTGATCCTCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCTATAGCCCCTGCTTACCTGGAACTCCTGGTGATCCTCCTG  50

seq1  CCTCCATCTCCTAAGTGCTACTACGACTGAGGGTAAAATCTAAAATCTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCATCTCCTAAGTGCTACTACGACTGAGGGTAAAATCTAAAATCTAA  100

seq1  TCATGCAAAGTTAAAAGTTTGTTGGACTTGTTCTATTGTTTGTAGAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCAAAGTTAAAAGTTTGTTGGACTTGTTCTATTGTTTGTAGAAAAA  150

seq1  ACAAGGGTGGGAAGATTAAAGAAATAGCCAAGAAGCTTGGATGGAAGTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGGTGGGAAGATTAAAGAAATAGCCAAGAAGCTTGGATGGAAGTAC  200

seq1  ACATTTTGTGGGCTGCAGAAAATGTCTTCATTTTAATCCACAGAAGTAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTGTGGGCTGCAGAAAATGTCTTCATTTTAATCCACAGAAGTAGC  250

seq1  AAAGACCATGTTTATTACTGTTGGTATAAAGGCAAATATACTATTACAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACCATGTTTATTACTGTTGGTATAAAGGCAAATATACTATTACAAG  300

seq1  GAAAACATCTTTGCTAGTCTATACCTTTTTTTGTTTTGTCCTGATTTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACATCTTTGCTAGTCTATACCTTTTTTTGTTTTGTCCTGATTTCAT  350

seq1  AAGTCAAAACATTTTTGTGCACCTTATAATTATTTTGGAGGGTATCCAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAAAACATTTTTGTGCACCTTATAATTATTTTGGAGGGTATCCAGG  400

seq1  CCTAAGTTATTCTATAGCAAATCACATGTGTATATATTATTTATATTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAGTTATTCTATAGCAAATCACATGTGTATATATTATTTATATTTTA  450

seq1  TGTTATATAATTCTAAAAATATAATGTAACGTAATACTTATTTGTAATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATATAATTCTAAAAATATAATGTAACGTAATACTTATTTGTAATTA  500

seq1  TTATATATTTGCTTTTTATTTCATCTTTATGTGTAGGAGTGTTTTGCCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATATTTGCTTTTTATTTCATCTTTATGTGTAGGAGTGTTTTGCCTG  550

seq1  CTTGTATGTGCACCCATTGCCGGCCCCAGAGAAGGGCATCTGTTCTCATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTATGTGCACCCATTGCCGGCCCCAGAGAAGGGCATCTGTTCTCATC  600

seq1  ACTTAGGACCGAAGTTTCAGACAGATGTGAACTGCAATGTGGCGCTAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGGACCGAAGTTTCAGACAGATGTGAACTGCAATGTGGCGCTAGAA  650

seq1  AATTAACTCTGGGTCCTCTGGAAGATCAGTAAGTGTTCCTAACTGCTGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAACTCTGGGTCCTCTGGAAGATCAGTAAGTGTTCCTAACTGCTGAG  700

seq1  CTCTCGCTCCAGCGTCAGACTTGTGTTTCTTACACTCAAGAGTAACTTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCGCTCCAGCGTCAGACTTGTGTTTCTTACACTCAAGAGTAACTTAG  750

seq1  CATTTATGTCCTTTCACGAATAAAGCATGGTATATTGCTGAAGTCTGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATGTCCTTTCACGAATAAAGCATGGTATATTGCTGAAGTCTGAAA  800

seq1  TCTGGGTTACGAATTCTGCCAGGATCTGTATCATCAGGGACAAGGAACTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGTTACGAATTCTGCCAGGATCTGTATCATCAGGGACAAGGAACTG  850

seq1  CGGGTAGTTTCTATCATTTCCCCTCATTTCTGAAAATTTCAGTTAGCTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGTAGTTTCTATCATTTCCCCTCATTTCTGAAAATTTCAGTTAGCTAT  900

seq1  CAAGAGTCTTGTTTAAAAAAAAACTATCATAAATGTGTTACTTTAAAAAC  950
      | |||||||||||| ||||||||||||||||||||||||||||| |||||
seq2  C-AGAGTCTTGTTT-AAAAAAAACTATCATAAATGTGTTACTTTTAAAAC  948

seq1  CATGCATACATATAGTGCTTCTAGTTTGAAACCACTTTCTGCAACTTTGA  1000
      |||||||||||||||||||||||| |||||||||| ||||||||||||||
seq2  CATGCATACATATAGTGCTTCTAG-TTGAAACCAC-TTCTGCAACTTTGA  996

seq1  TTTTGATAGAAACCTTTGACGAAATGAAAAAAAAGGGGGGGGGGAGAAAA  1050
      |||||||||||||  ||||||||||| ||||||||||||| |||| ||||
seq2  TTTTGATAGAAAC--TTGACGAAATG-AAAAAAAGGGGGGAGGGAAAAAA  1043

seq1  TAACGGTCAGCTTCAACTGCCGCTTCCTGATTGGCTAAAGCCCCTCTAAC  1100
      | ||||||||| |||   ||||||  |||| || |||| |||| |||| |
seq2  T-ACGGTCAGC-TCACTGGCCGCT--CTGA-TGACTAAGGCCCTTCTACC  1088

seq1  GGTCATCTGCTGCCTTATAAACCACACCCCCTTT  1134
      ||||||||||||| ||||  | ||||||||||||
seq2  GGTCATCTGCTGCATTAT--ATCACACCCCCTTT  1120