MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-286M06
Chromosome	2 (Build37)
Map Location	101,945,822 - 102,085,078
singlet/doublet	doublet
Overlap gene	Ldlrad3, LOC674202
Upstream gene	B230118H07Rik, Rag2, Rag1, LOC100042930, Traf6, 2600010E01Rik, LOC100043302, Commd9
Downstream gene	Trim44, Fjx1, E430002G05Rik, Slc1a2, Cd44, Pdhx, Apip
Link	Open Mouse BAC browser

Click to get alignment info.

name	B230118H07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68170 MGI:1915420
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rag2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19374 MGI:97849
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rag1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19373 MGI:97848
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042930 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042930
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	Traf6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22034 MGI:108072
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2600010E01Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72446 MGI:1919696
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100043302 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043302
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Commd9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76501 MGI:1923751
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ldlrad3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:241576 MGI:2138856
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC674202 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:674202
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 441 ESTs, 4 Proteins pseudo : _no_value

name	Trim44 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:80985 MGI:1931835
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fjx1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14221 MGI:1341907
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	E430002G05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:210622 MGI:2445082
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc1a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20511 MGI:101931
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Cd44 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12505 MGI:88338
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Pdhx (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27402 MGI:1351627
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Apip (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56369 MGI:1926788
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	B230118H07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375303 GeneID:68170 MGI:1915420
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA B230118H07 gene transcript_id : NM_026592.3

name	Rag2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144227233 GeneID:19374 MGI:97849
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : recombination activating gene 2 transcript_id : NM_009020.3

name	Rag1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133778932 GeneID:19373 MGI:97848
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : recombination activating gene 1 transcript_id : NM_009019.2

name	LOC100042930 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249906 GeneID:100042930
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : hypothetical protein LOC100042930 transcript_id : XM_001479093.1

name	Traf6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:38348245 GeneID:22034 MGI:108072
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Tnf receptor-associated factor 6 transcript_id : NM_009424.2

name	2600010E01Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:139948240 GeneID:72446 MGI:1919696
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2600010E01 gene transcript_id : NM_175181.4

name	2600010E01Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:139949021 GeneID:72446 MGI:1919696
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2600010E01 gene transcript_id : NM_001083810.1

name	LOC100043302 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249965 GeneID:100043302
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043302 transcript_id : XM_001479675.1

name	Commd9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142384915 GeneID:76501 MGI:1923751
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : COMM domain containing 9 transcript_id : NM_029635.2

name	Ldlrad3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124001548 GeneID:241576 MGI:2138856
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : low density lipoprotein receptor class A domain containing 3 transcript_id : NM_178886.2

name	Trim44 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:68989253 GeneID:80985 MGI:1931835
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tripartite motif-containing 44 transcript_id : NM_020267.2

name	Fjx1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47059107 GeneID:14221 MGI:1341907
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : four jointed box 1 (Drosophila) transcript_id : NM_010218.2

name	E430002G05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982079 GeneID:210622 MGI:2445082
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA E430002G05 gene transcript_id : NM_173749.3

name	Slc1a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142347512 GeneID:20511 MGI:101931
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 1 (glial high affinity glutamate transporter), member 2 transcript_id : NM_001077514.2

name	Slc1a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892173 GeneID:20511 MGI:101931
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 1 (glial high affinity glutamate transporter), member 2 transcript_id : NM_011393.2

name	Slc1a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117606274 GeneID:20511 MGI:101931
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 1 (glial high affinity glutamate transporter), member 2 transcript_id : NM_001077515.1

name	Cd44 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85540467 GeneID:12505 MGI:88338
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CD44 antigen transcript_id : NM_001039151.1

name	Cd44 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85540465 GeneID:12505 MGI:88338
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CD44 antigen transcript_id : NM_001039150.1

name	Cd44 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85540470 GeneID:12505 MGI:88338
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CD44 antigen transcript_id : NM_009851.2

name	Pdhx (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802665 GeneID:27402 MGI:1351627
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pyruvate dehydrogenase complex, component X transcript_id : NM_175094.3

name	Apip (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803057 GeneID:56369 MGI:1926788
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : APAF1 interacting protein transcript_id : NM_019735.3

name	B230118H07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386078 CCDS:CCDS16461.1 GeneID:68170 MGI:1915420
definition	codon_start : 1 note : Rag1/Rag2/Nwc fusion; Rag1/Rag2/Nwc fusion protein; Rag1/Nwc fusion; Rag1/Nwc fusion protein product : hypothetical protein LOC68170 protein_id : NP_080868.1

name	Rag2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677661 CCDS:CCDS16462.1 GeneID:19374 MGI:97849
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004518 - nuclease activity [Evidence IEA] GO_process : GO:0030183 - B cell differentiation [Evidence IMP]; GO:0006310 - DNA recombination [Evidence TAS]; GO:0030217 - T cell differentiation [Evidence IMP] codon_start : 1 note : recombination activating protein 2; recombinase activating gene 2 product : recombination activating gene 2 protein_id : NP_033046.1

name	Rag1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:133778933 CCDS:CCDS16463.1 GeneID:19373 MGI:97848
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004518 - nuclease activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030183 - B cell differentiation [Evidence IDA]; GO:0006310 - DNA recombination [Evidence TAS] codon_start : 1 note : recombinase activating gene 1; recombination activating protein 1; recombination-activating gene 1 product : recombination activating gene 1 protein_id : NP_033045.2

name	LOC100042930 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249907 GeneID:100042930
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479143.1

name	Traf6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38348246 CCDS:CCDS16464.1 GeneID:22034 MGI:108072
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence TAS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0019886 - antigen processing and presentation of exogenous peptide antigen via MHC class II [Evidence IMP]; GO:0048468 - cell development [Evidence IMP]; GO:0006955 - immune response [Evidence IMP]; GO:0043011 - myeloid dendritic cell differentiation [Evidence IMP]; GO:0042475 - odontogenesis (sensu Vertebrata) [Evidence IMP]; GO:0009887 - organ morphogenesis [Evidence IMP]; GO:0001503 - ossification [Evidence IMP]; GO:0045084 - positive regulation of interleukin-12 biosynthesis [Evidence IMP]; GO:0045410 - positive regulation of interleukin-6 biosynthesis [Evidence IMP]; GO:0042981 - regulation of apoptosis [Evidence IEA]; GO:0051023 - regulation of immunoglobulin secretion [Evidence IDA]; GO:0007165 - signal transduction [Evidence IDA]; GO:0042088 - T-helper 1 type immune response [Evidence IMP]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 product : Tnf receptor-associated factor 6 protein_id : NP_033450.2

name	2600010E01Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:139949022 GeneID:72446 MGI:1919696
definition	codon_start : 1 product : hypothetical protein LOC72446 protein_id : NP_001077279.1

name	2600010E01Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:139948241 GeneID:72446 MGI:1919696
definition	codon_start : 1 product : hypothetical protein LOC72446 protein_id : NP_780390.3

name	LOC100043302 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249966 GeneID:100043302
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479725.1

name	Commd9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313224 CCDS:CCDS16465.1 GeneID:76501 MGI:1923751
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : COMM domain containing 9 protein_id : NP_083911.1

name	Ldlrad3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124001549 GeneID:241576 MGI:2138856
definition	GO_function : GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 product : low density lipoprotein receptor class A domain containing 3 protein_id : NP_849217.2

name	Trim44 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:68989254 CCDS:CCDS16466.1 GeneID:80985 MGI:1931835
definition	GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] codon_start : 1 note : brain cDNA 7; DIPB product : DIPB protein protein_id : NP_064663.2

name	Fjx1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47059108 CCDS:CCDS16467.1 GeneID:14221 MGI:1341907
definition	GO_component : GO:0005615 - extracellular space [Evidence IDA] codon_start : 1 product : four jointed box 1 protein_id : NP_034348.2

name	E430002G05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982080 CCDS:CCDS16468.1 GeneID:210622 MGI:2445082
definition	GO_function : GO:0008233 - peptidase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : regeneration associated muscle protease protein_id : NP_776110.2

name	Slc1a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117606277 GeneID:20511 MGI:101931
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005386 - carrier activity [Evidence IEA]; GO:0017153 - sodium:dicarboxylate symporter activity [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0006835 - dicarboxylic acid transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; glial high affinity glutamate transporter; solute carrier family 1, member 2 product : excitatory amino acid transporter 2 isoform 1 protein_id : NP_001070982.1

name	Slc1a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117606275 GeneID:20511 MGI:101931
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005386 - carrier activity [Evidence IEA]; GO:0017153 - sodium:dicarboxylate symporter activity [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0006835 - dicarboxylic acid transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; glial high affinity glutamate transporter; solute carrier family 1, member 2 product : excitatory amino acid transporter 2 isoform 2 protein_id : NP_001070983.1

name	Slc1a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7106409 CCDS:CCDS16469.1 GeneID:20511 MGI:101931
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005386 - carrier activity [Evidence IEA]; GO:0017153 - sodium:dicarboxylate symporter activity [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0006835 - dicarboxylic acid transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform 3 is encoded by transcript variant 3; glial high affinity glutamate transporter; solute carrier family 1, member 2 product : excitatory amino acid transporter 2 isoform 3 protein_id : NP_035523.1

name	Cd44 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85540468 CCDS:CCDS16471.1 GeneID:12505 MGI:88338
definition	GO_component : GO:0009897 - external side of plasma membrane [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005540 - hyaluronic acid binding [Evidence IMP]; GO:0005515 - protein binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0001658 - ureteric bud branching [Evidence IMP] codon_start : 1 note : isoform c is encoded by transcript variant 3 product : CD44 antigen isoform c protein_id : NP_001034240.1

name	Cd44 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85540466 CCDS:CCDS16470.1 GeneID:12505 MGI:88338
definition	GO_component : GO:0009897 - external side of plasma membrane [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005540 - hyaluronic acid binding [Evidence IMP]; GO:0005515 - protein binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0001658 - ureteric bud branching [Evidence IMP] codon_start : 1 note : isoform b is encoded by transcript variant 2 product : CD44 antigen isoform b protein_id : NP_001034239.1

name	Cd44 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85540471 CCDS:CCDS16472.1 GeneID:12505 MGI:88338
definition	GO_component : GO:0009897 - external side of plasma membrane [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005540 - hyaluronic acid binding [Evidence IMP]; GO:0005515 - protein binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0001658 - ureteric bud branching [Evidence IMP] codon_start : 1 note : isoform a is encoded by transcript variant 1 product : CD44 antigen isoform a protein_id : NP_033981.2

name	Pdhx (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28201978 CCDS:CCDS16473.1 GeneID:27402 MGI:1351627
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0031405 - lipoic acid binding [Evidence IEA] codon_start : 1 note : dihydrolipoamide dehydrogenase-binding protein of pyruvate dehydrogenase complex (E3-binding protein) (proX) product : pyruvate dehydrogenase complex, component X protein_id : NP_780303.1

name	Apip (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981004 CCDS:CCDS16474.1 GeneID:56369 MGI:1926788
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0043066 - negative regulation of apoptosis [Evidence IMP] codon_start : 1 exception : mismatches in translation note : monocyte macrophage 19 product : APAF1 interacting protein protein_id : NP_062709.2

name	LOC674202 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149249969 GeneID:674202
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 441 ESTs, 4 Proteins product : similar to ribosomal protein pseudo : _no_value transcript_id : XR_034336.1

clone name	MSMg01-462O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085L21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-149H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525N22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-263E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-049H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-170I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-087F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-189D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-208P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107G11
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-286M06.b	B6Ng01-286M06.g
ACC	GA084875	GA084876
length	1,002	1,119
definition	B6Ng01-286M06.b	B6Ng01-286M06.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(102,084,451 - 102,085,078)	(101,945,822 - 101,946,938)
sequence	gaattcagcccaacgcttaccactaattattctgttggcctaattcctcc agcacactgcaacttgaggttctttggaaaagccagcagagtggagtttt ctttcccctgggtagcattgtggtagtcaatggtttctattgtgctttct ctggcatcctcccttgaagacttactgtctttataaagggtctcctgtgg tttaagactggaatggaatgcgtgtggcaggtggctgctctcacctgatg agagagcatccctccctgtgtttaggaaacagcccccagctttcccttgg agtcctctctctcctctgcagcaacactcgcccacctgactcaggtaaac tggcctgaccttctatcttgccactctgcctgtgcatctctacagtaaag taccagcctgcctccatcttaggcttaaaagcctagaaaagacaaactag gttcatttgtgttatgattaaacttcagattctcaaggattgggctatac cccctgcttgtaactacagatggttcggcgctgcctgctccaggaatggc aaacacgtctttgcttcaaaaagttgtttattactatcttgcaaccctac cctgtttcagaaggtgatatgactacttgtgactaccttgttaatgatta tcttgttatgtccatcttgcagcactgccttagtttcaagatgtcattag aaataactggttatacaattataacaattagttactcctaatattattgt tctaacttgttataactgtataacatgttatccctaataactataatcct gcctattttgcctgccaaatcccctgtttggaaagcccttacccctgagc tataaaaggcttgtcttccttacatccaatgttaaccttctctaagccca ttttaggaggaggtagcctgtatacatgaacaaaaatgcttgcttattaa ttttttttcattaactaatttggccatgatgatttgggttggtggccttt ct	gaattcagtacttcactagggctagccagagttaagacctgcaggaatag ggacacttcacatgtgacacagcagatattcaagcagaaactgagagtag gactgtccccaagagatggagcaagtatggcaagccagtttaaaaaaaaa aaaaaaaaaggcccgtgtccactgcttccaggttagcccaggggagcact cgtgtcttcccagtgatcccctgggaagaaagaagagtcctctcccaggg cagccattatgaagcttcaccaatagagtggacggtgtaaacgaaaagcc ctggaggttgtacagcaggatcaagtggtcatcagggccacaattccccc atcgactccaggcggattcccttcctcaccccaccttgtcttctagggag cacggtgaacccttggcatccctggctgaaggctgtgtcactcccacctc ggtccttgtcagacagtatccctccctcatgtctttacattatcttctta gaacaccacgcagactgcaataagggctctccctactataatatgacctc atgttaactattcacatctgcagtgacccaatttccaagttagggcatgt ccttggttactgggaattaagatctgaacatgctcttatgttcaaaccac cgagaaagcagaagccgatgcctgtgaaagtcatcacacttcacaagtgt tggacacgcatgcatctctaggtgacaacttaaaacacaacggtgatgag tccatggctgtgctagtgtacggggtgactgtagccagcttccacaacct gaacggcttcagcagcagaagctgattttcccgaacttctggaggacaga tgtccaaaatcaacgtatatgagacacgaggacagccgggctttcttctc cctggtggctttacatcaccttctgtctcttgggtatctgagtccaaatt ttctctcttggaaaggacttcagctggtgatcatttaaggcccacttctt gttgacctcatttattcattatgtcttgcggtgcttaatggtgactgtca actcagtggggtaagaattgcctgccagcctcagtagcacacctcagtta caatcttgagggtggggca
quality values	Open. Hide. 58 31 13 23 54 38 27 46 62 62 38 30 62 62 62 62 62 49 62 62 39 31 62 49 44 62 62 44 62 49 62 62 43 59 34 32 32 29 31 34 46 56 62 62 62 62 62 62 62 59 49 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 59 59 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 49 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 56 62 62 62 62 62 62 62 62 52 62 62 62 62 62 62 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 58 58 58 58 58 58 58 52 58 54 58 58 58 54 49 54 54 58 36 42 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 54 49 54 58 54 54 58 54 52 58 58 58 58 54 58 58 58 54 54 54 58 58 54 58 58 58 54 58 58 54 54 41 52 41 49 54 52 58 41 40 58 51 58 51 53 58 58 58 58 58 58 58 58 58 58 58 41 26 58 58 58 58 52 51 58 46 47 58 51 53 42 58 52 58 58 51 58 58 58 58 58 51 47 47 45 49 58 54 50 49 58 58 49 58 41 58 51 50 35 40 58 37 18 58 40 58 39 33 52 53 53 58 39 58 52 58 54 58 58 51 54 46 39 53 40 41 58 52 51 58 58 39 31 51 51 40 50 26 52 52 49 53 53 49 58 32 41 50 38 47 50 58 41 31 53 53 53 51 58 53 39 37 58 40 41 51 32 51 50 50 50 53 32 58 58 53 45 40 51 52 51 29 41 41 52 34 52 52 42 39 54 54 39 40 30 51 39 52 51 39 24 53 40 45 31 33 13 49 42 39 53 53 29 27 41 34 44 33 35 45 33 35 42 40 54 53 42 54 37 42 53 40 42 32 54 45 46 33 44 30 45 53 31 21 40 39 36 42 39 33 40 37 40 32 37 45 44 54 35 33 35 33 27 32 31 45 53 32 31 30 32 28 52 52 32 27 31 36 22 32 40 28 27 53 27 24 28 23 34 34 47 30 36 23 35 29 52 46 22 34 21 29 31 30 31 28 29 51 29 29 25 51 51 45 26 45 21 46 14 11 26 30 51 33 18 18 46 45 30 29 31 26 46 46 34 32 31 43 16 31 34 32 31 35 46 46 33 19 34 18 30 28 38 20 42 18 31 15 31 31 36 21 26 24 42 31 31 16 31 25 36 19 27 30 21 24 33 16 14 24 31 37 32 32 28 24 41 46 31 26 38 48 48 22 30 14 36 28 28 13 38 21 29 30 32 12 14 17 20 38 22 22 29 18 17 11 23 23 19 29 24 30 44 44 44 31 32 31 20 17 21 37 24 24 16 44 10 31 19 33 21 48 48 48 48 43 43 26 21 24 23 34 8 21 34 21 22 25 15 47 26 7 26 10 23 25 27 22 34 24 28 34 22 48 26 30 47 29 14 13 27 17 14 12 24 11 16 29 48 23 21 20	Open. 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Alignment Information

BAC End 1

BAC End 2

seq1: chr2_102084451_102085078
seq2: B6Ng01-286M06.b_48_675 (reverse)

seq1  AAGTAGTCATATCACCTTCTGAAACAGGGTAGGGTTGCAAGATAGTAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGTCATATCACCTTCTGAAACAGGGTAGGGTTGCAAGATAGTAATA  50

seq1  AACAACTTTTTGAAGCAAAGACGTGTTTGCCATTCCTGGAGCAGGCAGCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACTTTTTGAAGCAAAGACGTGTTTGCCATTCCTGGAGCAGGCAGCG  100

seq1  CCGAACCATCTGTAGTTACAAGCAGGGGGTATAGCCCAATCCTTGAGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAACCATCTGTAGTTACAAGCAGGGGGTATAGCCCAATCCTTGAGAAT  150

seq1  CTGAAGTTTAATCATAACACAAATGAACCTAGTTTGTCTTTTCTAGGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGTTTAATCATAACACAAATGAACCTAGTTTGTCTTTTCTAGGCTT  200

seq1  TTAAGCCTAAGATGGAGGCAGGCTGGTACTTTACTGTAGAGATGCACAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCCTAAGATGGAGGCAGGCTGGTACTTTACTGTAGAGATGCACAGG  250

seq1  CAGAGTGGCAAGATAGAAGGTCAGGCCAGTTTACCTGAGTCAGGTGGGCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTGGCAAGATAGAAGGTCAGGCCAGTTTACCTGAGTCAGGTGGGCG  300

seq1  AGTGTTGCTGCAGAGGAGAGAGAGGACTCCAAGGGAAAGCTGGGGGCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTGCTGCAGAGGAGAGAGAGGACTCCAAGGGAAAGCTGGGGGCTGT  350

seq1  TTCCTAAACACAGGGAGGGATGCTCTCTCATCAGGTGAGAGCAGCCACCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAAACACAGGGAGGGATGCTCTCTCATCAGGTGAGAGCAGCCACCT  400

seq1  GCCACACGCATTCCATTCCAGTCTTAAACCACAGGAGACCCTTTATAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACACGCATTCCATTCCAGTCTTAAACCACAGGAGACCCTTTATAAAG  450

seq1  ACAGTAAGTCTTCAAGGGAGGATGCCAGAGAAAGCACAATAGAAACCATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAAGTCTTCAAGGGAGGATGCCAGAGAAAGCACAATAGAAACCATT  500

seq1  GACTACCACAATGCTACCCAGGGGAAAGAAAACTCCACTCTGCTGGCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTACCACAATGCTACCCAGGGGAAAGAAAACTCCACTCTGCTGGCTTT  550

seq1  TCCAAAGAACCTCAAGTTGCAGTGTGCTGGAGGAATTAGGCCAACAGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAGAACCTCAAGTTGCAGTGTGCTGGAGGAATTAGGCCAACAGAAT  600

seq1  AATTAGTGGTAAGCGTTGGGCTGAATTC  628
      ||||||||||||||||||||||||||||
seq2  AATTAGTGGTAAGCGTTGGGCTGAATTC  628

seq1: chr2_101945822_101946938
seq2: B6Ng01-286M06.g_71_1189

seq1  GAATTCAGTACTTCACTAGGGCTAGCCAGAGTTAAGACCTGCAGGAATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTACTTCACTAGGGCTAGCCAGAGTTAAGACCTGCAGGAATAG  50

seq1  GGACACTTCACATGTGACACAGCAGATATTCAAGCAGAAACTGAGAGTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACTTCACATGTGACACAGCAGATATTCAAGCAGAAACTGAGAGTAG  100

seq1  GACTGTCCCCAAGAGATGGAGCAAGTATGGCAAGCCAGTTTAAAAAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTCCCCAAGAGATGGAGCAAGTATGGCAAGCCAGTTTAAAAAAAAA  150

seq1  AAAAAAAAAGGCCCGTGTCCACTGCTTCCAGGTTAGCCCAGGGGAGCACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAGGCCCGTGTCCACTGCTTCCAGGTTAGCCCAGGGGAGCACT  200

seq1  CGTGTCTTCCCAGTGATCCCCTGGGAAGAAAGAAGAGTCCTCTCCCAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTCTTCCCAGTGATCCCCTGGGAAGAAAGAAGAGTCCTCTCCCAGGG  250

seq1  CAGCCATTATGAAGCTTCACCAATAGAGTGGACGGTGTAAACGAAAAGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCATTATGAAGCTTCACCAATAGAGTGGACGGTGTAAACGAAAAGCC  300

seq1  CTGGAGGTTGTACAGCAGGATCAAGTGGTCATCAGGGCCACAATTCCCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGGTTGTACAGCAGGATCAAGTGGTCATCAGGGCCACAATTCCCCC  350

seq1  ATCGACTCCAGGCGGATTCCCTTCCTCACCCCACCTTGTCTTCTAGGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGACTCCAGGCGGATTCCCTTCCTCACCCCACCTTGTCTTCTAGGGAG  400

seq1  CACGGTGAACCCTTGGCATCCCTGGCTGAAGGCTGTGTCACTCCCACCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGTGAACCCTTGGCATCCCTGGCTGAAGGCTGTGTCACTCCCACCTC  450

seq1  GGTCCTTGTCAGACAGTATCCCTCCCTCATGTCTTTACATTATCTTCTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTTGTCAGACAGTATCCCTCCCTCATGTCTTTACATTATCTTCTTA  500

seq1  GAACACCACGCAGACTGCAATAAGGGCTCTCCCTACTATAATATGACCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACCACGCAGACTGCAATAAGGGCTCTCCCTACTATAATATGACCTC  550

seq1  ATGTTAACTATTCACATCTGCAGTGACCCAATTTCCAAGTTAGGGCATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTAACTATTCACATCTGCAGTGACCCAATTTCCAAGTTAGGGCATGT  600

seq1  CCTTGGTTACTGGGAATTAAGATCTGAACATGCTCTTATGTTCAAACCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGTTACTGGGAATTAAGATCTGAACATGCTCTTATGTTCAAACCAC  650

seq1  CGAGAAAGCAGAAGCCGATGCCTGTGAAAGTCATCACACTTCACAAGTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGAAAGCAGAAGCCGATGCCTGTGAAAGTCATCACACTTCACAAGTGT  700

seq1  TGGACACGCATGCATCTCTAGGTGACAACTTAAAACACAACGGTGATGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACACGCATGCATCTCTAGGTGACAACTTAAAACACAACGGTGATGAG  750

seq1  TCCATGGCTGTGCTAGTGTACGGGGTGACTGTAGCCAGCTTCCACAACCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGGCTGTGCTAGTGTACGGGGTGACTGTAGCCAGCTTCCACAACCT  800

seq1  GAACGGCTTCAGCAGCAGAAGCTGATTTTCCCGAACTTCTGGAGGACAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACGGCTTCAGCAGCAGAAGCTGATTTTCCCGAACTTCTGGAGGACAGA  850

seq1  TGTCCAAAATCAACGTATATGAGACACGAGGACAGCC-GGCTTTCTTCTC  899
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TGTCCAAAATCAACGTATATGAGACACGAGGACAGCCGGGCTTTCTTCTC  900

seq1  CCT-GTGGCTTTACATCACCTTCTGTCTCTT-GGTATCTGAGTCCAAATT  947
      ||| ||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CCTGGTGGCTTTACATCACCTTCTGTCTCTTGGGTATCTGAGTCCAAATT  950

seq1  TTCTCTCTTGG-AAGGACTTCAGCT-GTGATCATTTAAGGCCCAC-TCT-  993
      ||||||||||| ||||||||||||| ||||||||||||||||||| ||| 
seq2  TTCTCTCTTGGAAAGGACTTCAGCTGGTGATCATTTAAGGCCCACTTCTT  1000

seq1  -GTGACCTCATTTTAATTCAATTATGTCTTTGCGGTGCTTAATTGTGACT  1042
        |||||||||||  |||| |||||||| |||||||||||||| ||||||
seq2  GTTGACCTCATTT--ATTC-ATTATGTC-TTGCGGTGCTTAATGGTGACT  1046

seq1  GTCAACTCCAGTGGGGTAAGAAATGCCTGCAAG-CTCAGTAAAGCACACC  1091
      ||||||| |||||||||||||| ||||||| || ||||||  ||||||||
seq2  GTCAACT-CAGTGGGGTAAGAATTGCCTGCCAGCCTCAGT--AGCACACC  1093

seq1  TCAGGTACATCTTTGGGGGTGGGGCA  1117
      |||| ||||   ||| ||||||||||
seq2  TCAGTTACAATCTTGAGGGTGGGGCA  1119

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information